Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS06G09090	Oryza sativa	0.0	753	364	100.00
OS06G09120	Oryza sativa	0.0	545	363	74.38
OS06G08910	Oryza sativa	5e-163	463	229	98.25
OS06G08930	Oryza sativa	3e-144	421	301	69.44
OS06G08900	Oryza sativa	1e-141	426	348	62.64
OS06G09050	Oryza sativa	2e-136	400	361	62.60
OS06G08890	Oryza sativa	2e-107	336	358	50.56
OS06G09130	Oryza sativa	7e-102	322	309	53.40
OS02G54640	Oryza sativa	3e-80	270	295	48.47
OS09G25960	Oryza sativa	2e-76	259	312	44.23
ATR_00019G01800	Amborella trichopoda	1e-75	256	302	46.36
ATR_00019G01790	Amborella trichopoda	2e-75	255	313	41.53
OS09G26000	Oryza sativa	1e-74	254	312	43.27
ATR_00019G01890	Amborella trichopoda	1e-73	251	295	44.75
OS09G25990	Oryza sativa	3e-72	247	358	39.66
ATR_00023G02080	Amborella trichopoda	3e-70	241	296	44.59
OS09G26160	Oryza sativa	1e-68	237	305	42.62
ATR_00019G01840	Amborella trichopoda	1e-67	223	288	43.06
AT5G11210	Arabidopsis thaliana	4e-67	232	355	37.46
AT2G29110	Arabidopsis thaliana	6e-66	229	297	44.78
AT2G29120	Arabidopsis thaliana	1e-64	226	299	41.14
ATR_00021G01240	Amborella trichopoda	2e-63	223	295	40.34
OS09G26144	Oryza sativa	6e-61	215	319	38.87
ATR_00062G00280	Amborella trichopoda	9e-61	214	295	38.31
OS06G46670	Oryza sativa	4e-60	213	298	38.93
OS09G25980	Oryza sativa	5e-60	213	337	34.72
PP00056G00160	Physcomitrella patens	1e-59	212	309	36.57
OS02G02540	Oryza sativa	1e-58	209	333	37.24
AT2G29100	Arabidopsis thaliana	3e-57	205	295	41.36
ATR_00044G01270	Amborella trichopoda	5e-57	204	307	37.79
AT5G27100	Arabidopsis thaliana	9e-57	203	300	37.67
AT1G42540	Arabidopsis thaliana	9e-57	203	313	37.06
OS04G49570	Oryza sativa	1e-55	200	297	37.37
AT1G05200	Arabidopsis thaliana	9e-55	198	329	34.04
AT2G24720	Arabidopsis thaliana	1e-54	197	272	37.87
ATR_00019G01940	Amborella trichopoda	1e-54	197	298	39.60
ATR_00021G01270	Amborella trichopoda	4e-54	196	305	37.05
OS07G01310	Oryza sativa	5e-54	196	297	37.37
ATR_00055G01750	Amborella trichopoda	2e-53	193	191	47.64
AT2G17260	Arabidopsis thaliana	5e-53	193	318	35.85
AT3G51480	Arabidopsis thaliana	7e-53	192	302	37.09
ATR_00010G00990	Amborella trichopoda	2e-52	191	290	40.34
AT2G24710	Arabidopsis thaliana	1e-51	188	310	35.16
ATR_00019G02010	Amborella trichopoda	2e-51	187	221	47.06
AT4G35290	Arabidopsis thaliana	7e-51	187	298	36.91
ATR_00010G01010	Amborella trichopoda	2e-50	186	285	38.60
AT5G48400	Arabidopsis thaliana	3e-50	184	315	35.56
AT5G48410	Arabidopsis thaliana	1e-49	183	291	36.08
ATR_00019G01900	Amborella trichopoda	1e-49	176	230	40.87
ATR_00019G01860	Amborella trichopoda	8e-49	171	228	43.86
AT2G32400	Arabidopsis thaliana	1e-48	181	312	33.65
AT4G31710	Arabidopsis thaliana	3e-43	165	273	36.63
AT3G04110	Arabidopsis thaliana	1e-41	159	307	32.57
AT3G07520	Arabidopsis thaliana	3e-41	159	296	32.09
ATR_00062G00290	Amborella trichopoda	3e-35	136	203	37.44
AT5G11180	Arabidopsis thaliana	3e-31	130	203	35.96
OS06G06130	Oryza sativa	1e-25	113	261	29.89
AT2G32390	Arabidopsis thaliana	3e-19	93.2	230	26.52
ATR_00019G01820	Amborella trichopoda	5e-18	89.0	82	51.22
ATR_00019G01950	Amborella trichopoda	1e-16	82.0	124	36.29
ENSG00000163873	Homo sapiens	9e-13	73.6	314	21.66
FBgn0051201	Drosophila melanogaster	2e-12	72.8	339	22.42
ENSMUSG00000001985	Mus musculus	3e-12	72.0	303	21.78
ENSMUSG00000022935	Mus musculus	8e-12	70.5	303	22.77
ENSG00000171189	Homo sapiens	2e-11	69.7	337	20.77
WBGene00001614	Caenorhabditis elegans	2e-11	69.7	320	22.50
ENSG00000164418	Homo sapiens	5e-11	68.2	308	21.75
ENSMUSG00000056073	Mus musculus	5e-11	68.2	308	21.75
FBgn0028422	Drosophila melanogaster	1e-10	67.0	312	21.47
WBGene00001612	Caenorhabditis elegans	1e-10	67.0	316	21.20
ATR_00062G00300	Amborella trichopoda	1e-10	66.6	73	42.47
FBgn0259215	Drosophila melanogaster	1e-10	66.6	169	28.99
PP00253G00100	Physcomitrella patens	2e-10	66.2	84	40.48
WBGene00001615	Caenorhabditis elegans	5e-10	65.1	321	20.87
FBgn0039916	Drosophila melanogaster	6e-10	64.7	310	20.97
FBgn0004620	Drosophila melanogaster	1e-09	63.5	307	21.17
WBGene00001613	Caenorhabditis elegans	2e-09	63.5	318	22.01
OS07G33790	Oryza sativa	2e-09	62.8	69	43.48
ENSMUSG00000003378	Mus musculus	3e-09	62.8	280	20.00
ENSG00000155511	Homo sapiens	3e-09	62.4	318	21.38
ENSMUSG00000020524	Mus musculus	4e-09	62.4	318	21.38
FBgn0004619	Drosophila melanogaster	4e-09	62.4	364	21.15
FBgn0020429	Drosophila melanogaster	4e-09	62.4	305	19.67
ENSG00000183454	Homo sapiens	7e-09	61.6	320	22.19
ENSG00000152578	Homo sapiens	1e-08	60.8	326	20.86
ENSMUSG00000025892	Mus musculus	1e-08	60.8	326	20.86
ENSMUSG00000059003	Mus musculus	1e-08	60.8	320	21.88
ENSG00000120251	Homo sapiens	3e-08	59.7	326	21.17
FC071G00080	Fragilariopsis cylindrus	3e-08	59.3	246	26.02
OS09G31160	Oryza sativa	4e-08	56.6	107	35.51
ENSMUSG00000033981	Mus musculus	5e-08	58.9	326	20.86
WBGene00001617	Caenorhabditis elegans	5e-08	58.5	294	21.09
FBgn0038837	Drosophila melanogaster	6e-08	58.5	309	20.71
ENSMUSG00000001986	Mus musculus	1e-07	57.8	329	20.97
FBgn0038840	Drosophila melanogaster	2e-07	57.4	314	20.70
ENSMUSG00000032017	Mus musculus	4e-07	56.2	293	19.80
WBGene00001618	Caenorhabditis elegans	4e-07	55.8	144	27.78
ENSG00000149403	Homo sapiens	5e-07	55.8	293	19.80
ENSG00000125675	Homo sapiens	7e-07	55.1	329	20.67
FBgn0039927	Drosophila melanogaster	2e-06	53.9	318	19.18
FBgn0010399	Drosophila melanogaster	2e-06	53.9	300	21.00
FBgn0052704	Drosophila melanogaster	5e-06	52.4	143	27.97
FBgn0031634	Drosophila melanogaster	5e-06	52.4	119	26.89
ENSMUSG00000020734	Mus musculus	1e-05	51.6	328	19.82

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment