Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS06G08910	Oryza sativa	2e-173	484	236	100.00
OS06G09090	Oryza sativa	3e-163	463	229	98.25
OS06G09120	Oryza sativa	8e-117	349	229	75.55
OS06G08930	Oryza sativa	2e-110	330	235	71.91
OS06G08900	Oryza sativa	4e-107	331	233	72.10
OS06G09050	Oryza sativa	2e-93	285	186	78.49
OS06G08890	Oryza sativa	1e-73	243	228	57.02
OS06G09130	Oryza sativa	2e-72	239	228	54.82
OS02G54640	Oryza sativa	1e-58	204	229	49.78
ATR_00019G01800	Amborella trichopoda	1e-58	203	239	47.28
ATR_00019G01790	Amborella trichopoda	1e-57	200	232	43.53
ATR_00023G02080	Amborella trichopoda	6e-56	196	234	44.87
ATR_00019G01890	Amborella trichopoda	2e-55	194	234	42.31
OS09G25960	Oryza sativa	2e-54	192	234	44.44
ATR_00019G01860	Amborella trichopoda	2e-52	176	225	44.44
ATR_00019G01840	Amborella trichopoda	3e-52	178	232	41.81
OS09G26000	Oryza sativa	3e-52	186	234	42.74
ATR_00019G01900	Amborella trichopoda	8e-51	175	225	40.44
OS09G26160	Oryza sativa	6e-49	177	236	42.80
OS09G25990	Oryza sativa	6e-49	177	249	40.16
AT2G29110	Arabidopsis thaliana	5e-47	172	232	44.40
AT2G29120	Arabidopsis thaliana	6e-46	169	234	39.74
AT5G11210	Arabidopsis thaliana	1e-45	167	223	39.01
OS09G25980	Oryza sativa	4e-44	163	232	35.78
ATR_00021G01240	Amborella trichopoda	4e-44	163	230	39.57
ATR_00062G00280	Amborella trichopoda	8e-44	162	231	36.80
OS09G26144	Oryza sativa	9e-44	162	242	41.32
ATR_00044G01270	Amborella trichopoda	2e-43	161	233	39.48
PP00056G00160	Physcomitrella patens	2e-43	161	234	37.61
AT1G42540	Arabidopsis thaliana	8e-43	159	233	38.63
ATR_00019G01940	Amborella trichopoda	2e-42	158	234	38.03
OS02G02540	Oryza sativa	2e-42	158	231	40.26
OS04G49570	Oryza sativa	6e-42	157	233	37.77
AT5G27100	Arabidopsis thaliana	1e-41	156	235	37.02
OS06G46670	Oryza sativa	2e-41	155	230	37.83
AT3G51480	Arabidopsis thaliana	5e-41	154	231	38.10
AT2G24710	Arabidopsis thaliana	1e-40	153	235	37.87
AT1G05200	Arabidopsis thaliana	1e-39	150	231	34.20
AT2G17260	Arabidopsis thaliana	3e-39	149	233	36.48
AT2G24720	Arabidopsis thaliana	4e-39	149	214	37.85
AT2G29100	Arabidopsis thaliana	9e-39	148	230	41.30
AT4G35290	Arabidopsis thaliana	9e-37	142	232	36.21
ATR_00062G00290	Amborella trichopoda	1e-36	136	198	37.37
ATR_00010G00990	Amborella trichopoda	2e-36	141	230	40.43
OS07G01310	Oryza sativa	4e-36	140	231	36.80
ATR_00021G01270	Amborella trichopoda	4e-36	140	229	35.37
AT5G48410	Arabidopsis thaliana	9e-36	139	234	37.61
ATR_00055G01750	Amborella trichopoda	1e-35	139	133	47.37
ATR_00010G01010	Amborella trichopoda	2e-35	139	228	38.60
AT5G48400	Arabidopsis thaliana	4e-35	137	232	36.21
ATR_00019G02010	Amborella trichopoda	1e-34	135	164	45.73
AT2G32400	Arabidopsis thaliana	4e-33	132	229	34.50
AT4G31710	Arabidopsis thaliana	1e-29	121	214	34.58
AT3G07520	Arabidopsis thaliana	2e-29	121	231	32.90
AT5G11180	Arabidopsis thaliana	9e-29	119	183	36.61
AT3G04110	Arabidopsis thaliana	1e-26	113	242	31.40
AT2G32390	Arabidopsis thaliana	3e-19	91.3	189	28.57
ATR_00019G01950	Amborella trichopoda	2e-17	82.4	117	35.90
OS06G06130	Oryza sativa	1e-14	77.0	173	31.79
ENSG00000163873	Homo sapiens	6e-09	59.7	232	21.98
ENSMUSG00000022935	Mus musculus	1e-08	58.5	230	23.48
FBgn0051201	Drosophila melanogaster	1e-08	58.5	242	24.79
OS09G31160	Oryza sativa	1e-08	56.6	107	35.51
ENSG00000171189	Homo sapiens	2e-08	58.2	232	22.84
ENSMUSG00000001985	Mus musculus	2e-08	57.8	232	21.55
FBgn0004619	Drosophila melanogaster	7e-08	56.6	206	24.76
ENSMUSG00000056073	Mus musculus	1e-07	55.5	235	22.13
FBgn0038840	Drosophila melanogaster	2e-07	55.5	235	22.98
ENSG00000164418	Homo sapiens	2e-07	55.5	235	22.13
FBgn0004620	Drosophila melanogaster	2e-06	52.4	204	20.59
FBgn0028422	Drosophila melanogaster	2e-06	52.4	237	22.36
ENSMUSG00000003378	Mus musculus	2e-06	52.0	197	22.34
WBGene00001614	Caenorhabditis elegans	3e-06	51.6	207	21.26
FBgn0259215	Drosophila melanogaster	4e-06	51.2	122	29.51
WBGene00001612	Caenorhabditis elegans	5e-06	50.8	235	22.55

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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