Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS06G08900	Oryza sativa	0.0	1442	703	100.00
OS06G08930	Oryza sativa	0.0	744	399	95.49
OS06G09120	Oryza sativa	3e-174	514	521	55.85
OS06G08890	Oryza sativa	2e-148	454	496	52.02
OS06G09090	Oryza sativa	4e-144	432	348	62.93
OS06G09130	Oryza sativa	1e-138	429	439	53.76
OS06G08910	Oryza sativa	3e-109	337	234	72.22
OS02G54640	Oryza sativa	6e-108	357	401	50.37
ATR_00019G01800	Amborella trichopoda	2e-101	336	399	47.87
AT5G11210	Arabidopsis thaliana	1e-100	334	409	42.05
ATR_00019G01890	Amborella trichopoda	4e-97	325	395	43.54
OS09G26160	Oryza sativa	1e-93	317	402	43.78
AT2G29120	Arabidopsis thaliana	3e-93	317	401	42.39
OS09G25960	Oryza sativa	3e-93	316	442	40.27
OS09G26000	Oryza sativa	5e-92	312	404	41.83
ATR_00023G02080	Amborella trichopoda	5e-90	307	402	43.53
OS06G09050	Oryza sativa	2e-88	287	327	50.15
OS09G25990	Oryza sativa	1e-87	301	419	40.57
ATR_00019G01790	Amborella trichopoda	4e-87	298	402	42.04
ATR_00021G01240	Amborella trichopoda	2e-86	298	413	39.71
AT2G29110	Arabidopsis thaliana	3e-86	297	400	44.00
AT2G24710	Arabidopsis thaliana	6e-86	295	442	39.14
OS09G25980	Oryza sativa	5e-84	291	405	39.01
PP00056G00160	Physcomitrella patens	1e-83	291	404	39.60
AT2G24720	Arabidopsis thaliana	2e-83	289	378	41.53
OS09G26144	Oryza sativa	3e-83	289	417	41.25
AT5G27100	Arabidopsis thaliana	2e-82	286	399	40.35
ATR_00010G01010	Amborella trichopoda	9e-80	279	355	42.54
ATR_00019G01940	Amborella trichopoda	3e-79	278	395	41.01
ATR_00021G01270	Amborella trichopoda	1e-78	275	390	40.00
ATR_00010G00990	Amborella trichopoda	3e-78	274	391	41.94
AT2G29100	Arabidopsis thaliana	2e-77	272	397	40.55
ATR_00044G01270	Amborella trichopoda	5e-77	271	403	40.20
ATR_00055G01750	Amborella trichopoda	2e-76	267	288	45.49
OS06G46670	Oryza sativa	3e-76	268	413	38.26
AT1G05200	Arabidopsis thaliana	9e-76	268	428	37.62
OS02G02540	Oryza sativa	1e-74	265	400	40.00
OS07G01310	Oryza sativa	6e-74	263	401	38.65
ATR_00062G00280	Amborella trichopoda	6e-74	263	411	37.23
OS04G49570	Oryza sativa	2e-73	261	405	39.51
AT1G42540	Arabidopsis thaliana	2e-71	255	462	34.63
AT2G17260	Arabidopsis thaliana	1e-70	253	412	38.35
AT3G51480	Arabidopsis thaliana	3e-70	252	419	36.52
AT4G35290	Arabidopsis thaliana	3e-70	252	402	39.30
ATR_00019G02010	Amborella trichopoda	4e-70	250	323	44.89
AT5G48400	Arabidopsis thaliana	9e-68	244	419	36.52
AT5G11180	Arabidopsis thaliana	1e-66	241	428	34.81
AT5G48410	Arabidopsis thaliana	3e-66	239	414	35.27
AT2G32400	Arabidopsis thaliana	5e-66	239	408	34.31
ATR_00019G01840	Amborella trichopoda	9e-65	224	290	42.76
OS06G08960	Oryza sativa	1e-62	221	147	91.16
AT4G31710	Arabidopsis thaliana	2e-61	226	371	36.93
AT3G04110	Arabidopsis thaliana	2e-61	225	411	33.58
AT3G07520	Arabidopsis thaliana	2e-60	223	408	34.56
ATR_00019G01860	Amborella trichopoda	3e-48	175	234	46.15
ATR_00019G01900	Amborella trichopoda	1e-47	176	236	42.80
OS06G06130	Oryza sativa	1e-45	179	344	32.56
ATR_00019G01820	Amborella trichopoda	3e-41	162	179	45.25
ATR_00062G00290	Amborella trichopoda	2e-38	149	212	39.62
AT2G32390	Arabidopsis thaliana	6e-34	143	403	28.54
ATR_00062G00300	Amborella trichopoda	2e-30	128	168	41.07
PP00253G00100	Physcomitrella patens	9e-28	123	183	39.34
OS07G33790	Oryza sativa	7e-25	114	168	38.10
ENSG00000163873	Homo sapiens	3e-24	112	445	25.17
ENSMUSG00000022935	Mus musculus	9e-24	111	426	25.35
ENSMUSG00000001985	Mus musculus	1e-23	111	452	24.56
FBgn0004619	Drosophila melanogaster	4e-23	109	419	24.34
ENSG00000171189	Homo sapiens	1e-22	107	426	24.65
WBGene00001613	Caenorhabditis elegans	1e-22	107	439	24.15
WBGene00001612	Caenorhabditis elegans	7e-22	105	379	24.27
ENSMUSG00000056073	Mus musculus	2e-21	103	417	25.18
FBgn0039927	Drosophila melanogaster	2e-21	103	450	23.78
ENSG00000164418	Homo sapiens	2e-21	103	417	25.18
FBgn0038837	Drosophila melanogaster	3e-21	102	391	24.55
ENSMUSG00000001986	Mus musculus	1e-20	101	425	25.65
WBGene00001614	Caenorhabditis elegans	2e-20	100	384	26.04
ENSG00000125675	Homo sapiens	3e-20	100	423	25.30
ENSG00000152578	Homo sapiens	6e-20	99.0	425	25.88
ENSMUSG00000025892	Mus musculus	7e-20	99.0	425	25.88
ENSG00000120251	Homo sapiens	7e-20	98.6	437	25.63
ENSMUSG00000033981	Mus musculus	2e-19	97.4	435	25.29
ENSMUSG00000020524	Mus musculus	3e-19	97.1	414	25.12
ENSG00000155511	Homo sapiens	3e-19	96.7	414	25.12
CNC64A_002G04280	Chlorella sp NC64A	7e-19	94.7	400	24.25
FBgn0039916	Drosophila melanogaster	1e-18	95.1	401	23.69
FBgn0004620	Drosophila melanogaster	1e-18	95.1	395	23.54
WBGene00001615	Caenorhabditis elegans	4e-18	93.2	454	23.13
FBgn0031634	Drosophila melanogaster	6e-17	89.4	461	20.61
FBgn0051201	Drosophila melanogaster	6e-17	89.4	376	25.00
FBgn0020429	Drosophila melanogaster	6e-17	89.4	434	20.97
ENSMUSG00000003378	Mus musculus	7e-17	89.0	418	22.01
ENSMUSG00000032017	Mus musculus	2e-16	87.4	381	22.05
ENSG00000149403	Homo sapiens	3e-16	87.0	381	22.31
WBGene00001618	Caenorhabditis elegans	5e-16	85.9	230	30.43
FBgn0038840	Drosophila melanogaster	1e-15	85.1	371	23.18
FBgn0026255	Drosophila melanogaster	2e-15	84.7	375	22.67
FBgn0028422	Drosophila melanogaster	5e-14	80.1	398	23.12
ENSMUSG00000071424	Mus musculus	8e-14	79.3	418	23.92
ENSMUSG00000035745	Mus musculus	1e-13	79.0	353	20.11
FBgn0052704	Drosophila melanogaster	2e-13	78.2	429	22.14
ENSG00000152208	Homo sapiens	3e-13	77.4	418	23.44
ATR_00019G01950	Amborella trichopoda	8e-13	72.8	121	39.67
WBGene00001617	Caenorhabditis elegans	9e-13	75.9	397	21.16
ENSMUSG00000020734	Mus musculus	2e-12	75.1	422	20.62
ENSMUSG00000041078	Mus musculus	1e-11	72.4	383	21.67
ENSMUSG00000030209	Mus musculus	1e-11	72.0	445	20.00
ENSG00000273079	Homo sapiens	2e-11	72.0	445	20.00
ENSMUSG00000002771	Mus musculus	2e-11	71.6	379	20.58
ENSG00000182771	Homo sapiens	2e-11	71.6	382	21.20
ES0101G00290	Ectocarpus siliculosus	2e-11	71.6	214	25.70
FBgn0046113	Drosophila melanogaster	3e-11	70.9	393	21.12
ENSG00000105464	Homo sapiens	3e-11	71.2	379	20.58
ENSG00000183454	Homo sapiens	4e-11	70.9	412	21.12
ENSMUSG00000059003	Mus musculus	1e-10	68.9	412	20.87
WBGene00001616	Caenorhabditis elegans	2e-10	68.2	473	20.72
CNC64A_009G02330	Chlorella sp NC64A	4e-10	67.0	407	23.10
ES0101G00350	Ectocarpus siliculosus	5e-10	67.4	217	26.27
ES0444G00130	Ectocarpus siliculosus	7e-10	66.2	169	28.40
OS09G31160	Oryza sativa	8e-10	63.2	111	38.74
ENSMUSG00000026959	Mus musculus	1e-08	62.8	416	21.63
CNC64A_009G02320	Chlorella sp NC64A	1e-08	62.4	206	26.21
FBgn0010399	Drosophila melanogaster	2e-08	62.4	392	19.13
WBGene00003775	Caenorhabditis elegans	3e-08	61.6	394	19.29
ATR_00019G01930	Amborella trichopoda	3e-08	60.8	80	41.25
CNC64A_007G02470	Chlorella sp NC64A	4e-08	60.5	185	24.32
ATR_00019G01780	Amborella trichopoda	9e-08	59.3	195	31.79
CR16G08120	Chlamydomonas reinhardtii	1e-07	59.3	376	22.07
ATR_00019G01910	Amborella trichopoda	2e-07	58.5	99	42.42
PI00G30040	Picochlorum sp. SENEW3 (SE3)	2e-07	58.5	387	21.96
RCC4223.03g07620	Picochlorum_RCC4223	2e-07	58.5	385	22.34
WBGene00003774	Caenorhabditis elegans	2e-07	58.9	308	22.40
ATR_00019G01990	Amborella trichopoda	4e-07	57.0	80	37.50
FBgn0259215	Drosophila melanogaster	7e-07	57.0	219	24.20
ATR_00019G01960	Amborella trichopoda	1e-06	55.8	111	38.74
FC003G00680	Fragilariopsis cylindrus	2e-06	54.7	250	22.80
CNC64A_007G04070	Chlorella sp NC64A	3e-06	54.7	220	24.09
ATR_00106G00880	Amborella trichopoda	8e-06	50.1	62	40.32

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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