Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS04G45700	Oryza sativa	0.0	782	373	100.00
OS05G32110	Oryza sativa	2e-111	340	424	41.51
ATR_00047G01560	Amborella trichopoda	7e-103	316	399	42.11
AT1G09790	Arabidopsis thaliana	7e-99	308	405	42.96
AT3G02210	Arabidopsis thaliana	1e-67	227	200	52.50
ATR_00008G00280	Amborella trichopoda	2e-67	224	155	62.58
AT5G60920	Arabidopsis thaliana	4e-67	225	194	53.09
OS07G41310	Oryza sativa	4e-66	222	207	51.21
ATR_00047G01550	Amborella trichopoda	1e-64	218	146	60.27
AT3G29810	Arabidopsis thaliana	4e-64	217	198	51.52
OS03G30250	Oryza sativa	4e-63	215	165	55.76
OS03G30260	Oryza sativa	4e-62	212	181	54.14
OS07G41320	Oryza sativa	7e-62	212	170	52.94
AT5G15630	Arabidopsis thaliana	7e-61	208	167	53.89
PP00044G00600	Physcomitrella patens	1e-50	182	154	49.35
ATR_00232G00030	Amborella trichopoda	3e-50	173	152	50.66
PP00246G00290	Physcomitrella patens	4e-50	180	186	48.39
ATR_00041G02630	Amborella trichopoda	2e-49	178	175	49.14
ATR_00047G01570	Amborella trichopoda	2e-48	173	146	49.32
PP00084G00590	Physcomitrella patens	2e-46	170	141	51.77
OS03G54750	Oryza sativa	1e-43	158	171	44.44
OS10G35460	Oryza sativa	1e-38	148	220	37.27
ATR_00232G00020	Amborella trichopoda	4e-28	113	131	42.75
AT5G60950	Arabidopsis thaliana	3e-25	106	147	38.78
PP00233G00430	Physcomitrella patens	4e-11	68.6	177	28.25
PP00263G00520	Physcomitrella patens	9e-11	67.4	141	29.08
OS03G18910	Oryza sativa	2e-10	66.6	150	30.00
OS07G49080	Oryza sativa	6e-10	64.7	134	29.10
ATR_00066G02280	Amborella trichopoda	6e-10	64.7	197	26.90
AT5G49270	Arabidopsis thaliana	5e-09	62.0	166	27.11
OS06G47110	Oryza sativa	1e-08	60.5	135	31.11
PP00036G01190	Physcomitrella patens	2e-08	59.7	166	27.11
PP00195G00280	Physcomitrella patens	2e-08	59.7	141	27.66
PP00281G00440	Physcomitrella patens	2e-08	59.7	170	28.82
AT4G16120	Arabidopsis thaliana	3e-08	59.7	161	27.33
PP00277G00440	Physcomitrella patens	6e-08	58.2	133	28.57
AT4G27110	Arabidopsis thaliana	9e-07	54.7	201	25.87
PP00054G01730	Physcomitrella patens	1e-06	54.3	173	23.12
ATR_00057G00890	Amborella trichopoda	2e-06	53.9	205	25.37
AT3G16860	Arabidopsis thaliana	6e-06	52.4	159	24.53

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment