Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS04G34580	Oryza sativa	0.0	585	293	100.00
ATR_00040G00300	Amborella trichopoda	3e-62	208	240	48.33
OS03G05920	Oryza sativa	5e-49	173	257	40.86
AT2G35660	Arabidopsis thaliana	1e-46	167	249	38.55
OS03G05900	Oryza sativa	2e-46	167	240	40.42
ATR_00071G01710	Amborella trichopoda	2e-45	164	232	38.36
ATR_00002G01990	Amborella trichopoda	1e-44	162	276	39.86
AT5G05320	Arabidopsis thaliana	2e-44	161	288	35.76
OS03G05910	Oryza sativa	4e-42	155	243	41.15
ATR_00071G01700	Amborella trichopoda	7e-42	155	230	39.13
AT2G29720	Arabidopsis thaliana	6e-40	149	238	36.97
AT4G38540	Arabidopsis thaliana	1e-38	145	252	37.30
PP00002G02960	Physcomitrella patens	1e-38	147	222	37.84
AC00G29190	Asterochloris sp. Cgr-DA1pho v2.0	2e-34	133	278	34.53
OS03G05840	Oryza sativa	3e-34	129	209	38.76
OS03G05880	Oryza sativa	9e-34	130	124	49.19
OS02G27200	Oryza sativa	3e-33	130	283	31.10
PP00001G00430	Physcomitrella patens	1e-30	124	230	33.04
OS02G35320	Oryza sativa	7e-30	121	233	32.62
AT4G15760	Arabidopsis thaliana	7e-29	118	227	32.60
ATR_00099G01200	Amborella trichopoda	1e-27	115	206	33.01
OS07G30960	Oryza sativa	2e-27	113	171	40.94
ATR_00001G03030	Amborella trichopoda	7e-24	102	113	39.82
ATR_00099G01210	Amborella trichopoda	4e-23	100	135	40.00
RCC4223.01g02380	Picochlorum_RCC4223	5e-21	96.3	238	32.77
CR16G02260	Chlamydomonas reinhardtii	8e-21	95.9	255	32.55
AT4G15765	Arabidopsis thaliana	3e-20	92.0	241	30.71
PI00G38350	Picochlorum sp. SENEW3 (SE3)	9e-19	89.7	239	31.38
AP00G08470	Auxenochlorella protothecoides	2e-17	85.1	239	31.80
CV00G65700	Coccomyxa subellipsoidea C-169	1e-16	81.6	236	30.93
ATR_00099G01190	Amborella trichopoda	5e-16	80.1	126	32.54
CV00G21600	Coccomyxa subellipsoidea C-169	2e-13	73.2	157	35.03
VC00G96260	Volvox carteri	2e-12	71.2	198	33.84
Naga_100020g19	Nannochloropsis gaditana	1e-11	68.6	249	29.32
gsu21900	Galdieria sulphuraria	1e-11	68.2	284	26.41
gsu21920	Galdieria sulphuraria	1e-11	68.2	284	26.41
ATR_00001G03020	Amborella trichopoda	6e-10	59.3	73	46.58
CV00G02310	Coccomyxa subellipsoidea C-169	3e-08	58.5	152	28.95
gsu104030	Galdieria sulphuraria	2e-07	55.8	297	24.24
Naga_100268g3	Nannochloropsis gaditana	6e-07	54.3	218	29.36
CV00G41320	Coccomyxa subellipsoidea C-169	6e-07	54.3	255	27.06
OT_11G02360	Ostreococcus tauri	2e-06	53.1	174	30.46

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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