Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS04G32920	Oryza sativa	0.0	1644	802	100.00
OS02G31910	Oryza sativa	0.0	1154	802	71.57
OS02G31940	Oryza sativa	0.0	1137	788	71.57
OS01G70490	Oryza sativa	0.0	867	811	53.76
ATR_00016G02520	Amborella trichopoda	0.0	859	787	54.26
AT4G13420	Arabidopsis thaliana	0.0	852	780	54.49
OS03G37930	Oryza sativa	0.0	843	788	53.17
OS03G37830	Oryza sativa	0.0	838	791	52.09
OS03G37840	Oryza sativa	0.0	820	787	51.21
ATR_00057G02290	Amborella trichopoda	0.0	776	778	52.57
ATR_00005G00100	Amborella trichopoda	0.0	739	805	46.71
AT1G60160	Arabidopsis thaliana	0.0	673	794	43.07
OS09G21000	Oryza sativa	0.0	675	796	43.47
PP00143G00490	Physcomitrella patens	0.0	663	788	43.27
PP00096G00680	Physcomitrella patens	0.0	662	831	41.03
PP00006G00270	Physcomitrella patens	0.0	659	789	42.59
ATR_00088G00040	Amborella trichopoda	0.0	657	806	42.93
PP00165G00700	Physcomitrella patens	0.0	652	802	42.14
PP00118G00340	Physcomitrella patens	0.0	649	784	43.49
ATR_00125G00310	Amborella trichopoda	0.0	643	764	43.85
PP00029G01040	Physcomitrella patens	0.0	639	785	43.31
PP00074G00570	Physcomitrella patens	0.0	636	767	43.55
PP00033G01540	Physcomitrella patens	0.0	624	776	41.11
OS01G70940	Oryza sativa	0.0	623	796	41.21
PP00091G00700	Physcomitrella patens	0.0	620	779	41.98
ATR_00016G02450	Amborella trichopoda	0.0	620	781	40.85
ATR_00176G00310	Amborella trichopoda	0.0	618	791	40.71
PP00016G01310	Physcomitrella patens	0.0	610	784	41.84
PP00201G00620	Physcomitrella patens	0.0	608	793	41.11
OS04G52390	Oryza sativa	0.0	608	763	42.46
AT4G33530	Arabidopsis thaliana	0.0	608	791	39.70
PP00488G00070	Physcomitrella patens	0.0	603	778	39.20
ATR_00007G01980	Amborella trichopoda	0.0	602	780	41.67
PP00251G00170	Physcomitrella patens	0.0	598	784	40.31
OS07G48130	Oryza sativa	0.0	598	782	39.13
PP00025G01700	Physcomitrella patens	0.0	597	804	39.55
AT2G35060	Arabidopsis thaliana	0.0	595	747	42.30
AT1G31120	Arabidopsis thaliana	0.0	595	760	42.24
AT2G40540	Arabidopsis thaliana	0.0	593	789	40.94
OS03G21890	Oryza sativa	0.0	592	788	39.34
OS07G47350	Oryza sativa	0.0	592	772	41.32
AT5G14880	Arabidopsis thaliana	0.0	587	782	40.54
ATR_00057G02100	Amborella trichopoda	0.0	586	788	40.23
ATR_00007G01330	Amborella trichopoda	0.0	585	768	39.97
OS09G38960	Oryza sativa	0.0	584	767	40.42
PP00244G00290	Physcomitrella patens	0.0	583	763	40.10
PP00019G00330	Physcomitrella patens	0.0	579	788	39.85
AT1G70300	Arabidopsis thaliana	0.0	575	794	38.29
AT2G30070	Arabidopsis thaliana	0.0	569	756	39.42
OS01G27170	Oryza sativa	0.0	570	791	38.94
AT5G09400	Arabidopsis thaliana	0.0	571	797	38.27
OS07G32530	Oryza sativa	0.0	571	786	38.17
ATR_00006G03200	Amborella trichopoda	0.0	567	778	38.82
AT4G19960	Arabidopsis thaliana	0.0	561	779	40.18
OS06G45940	Oryza sativa	4e-180	543	768	39.32
OS02G49760	Oryza sativa	8e-180	543	774	37.98
AT3G02050	Arabidopsis thaliana	2e-176	535	791	38.69
OS08G39950	Oryza sativa	2e-175	530	799	37.30
ATR_00022G00710	Amborella trichopoda	4e-175	529	760	40.13
PP00166G00210	Physcomitrella patens	2e-171	526	747	37.62
OS06G42030	Oryza sativa	2e-169	518	661	40.54
OS04G52120	Oryza sativa	1e-168	516	774	37.34
AT4G23640	Arabidopsis thaliana	9e-167	509	781	37.00
PP00134G00600	Physcomitrella patens	8e-166	508	757	36.86
OS01G70660	Oryza sativa	4e-164	501	641	40.72
OS06G15910	Oryza sativa	1e-161	496	784	35.84
ATR_00176G00120	Amborella trichopoda	3e-159	489	780	37.05
CV00G15080	Coccomyxa subellipsoidea C-169	1e-149	468	685	38.54
AC00G86590	Asterochloris sp. Cgr-DA1pho v2.0	9e-148	461	788	34.52
ATR_00024G00790	Amborella trichopoda	6e-147	456	676	37.43
OS09G27580	Oryza sativa	1e-146	455	630	38.73
OS08G10550	Oryza sativa	3e-146	449	592	39.02
CV00G67780	Coccomyxa subellipsoidea C-169	6e-143	442	571	40.98
CV00G38060	Coccomyxa subellipsoidea C-169	7e-143	441	621	39.94
AC00G46840	Asterochloris sp. Cgr-DA1pho v2.0	8e-143	446	651	39.02
OS08G36340	Oryza sativa	2e-142	443	643	38.26
AC00G40290	Asterochloris sp. Cgr-DA1pho v2.0	3e-139	432	570	39.12
AC00G46850	Asterochloris sp. Cgr-DA1pho v2.0	3e-139	448	650	39.08
CV00G21730	Coccomyxa subellipsoidea C-169	1e-128	403	573	40.14
CV00G82010	Coccomyxa subellipsoidea C-169	3e-121	383	574	39.37
AP00G43680	Auxenochlorella protothecoides	2e-118	384	654	34.10
ATR_00002G04360	Amborella trichopoda	1e-111	353	409	45.23
DDB_G0288055	Dictyostelium discoideum	3e-100	332	755	30.33
ATR_00019G01440	Amborella trichopoda	5e-96	307	270	55.56
ATR_00019G01430	Amborella trichopoda	4e-93	307	509	36.94
CM06G00730	Cyanidioschyzon merolae	4e-92	312	606	31.52
CR17G04030	Chlamydomonas reinhardtii	9e-92	319	387	42.12
VC00G125960	Volvox carteri	4e-91	320	520	35.96
CR17G04020	Chlamydomonas reinhardtii	2e-88	310	360	42.22
gsu70610	Galdieria sulphuraria	2e-88	301	683	27.96
CR04G00340	Chlamydomonas reinhardtii	8e-88	308	360	42.22
CR17G04090	Chlamydomonas reinhardtii	2e-86	303	360	41.67
ATR_00057G02310	Amborella trichopoda	6e-85	279	249	53.41
gsu12760	Galdieria sulphuraria	3e-83	287	604	30.79
AC00G93020	Asterochloris sp. Cgr-DA1pho v2.0	5e-82	291	621	32.21
emh465340	Emiliania huxleyi	3e-78	267	500	33.00
emh567740	Emiliania huxleyi	2e-71	254	657	29.83
ATR_00057G02300	Amborella trichopoda	5e-68	233	342	38.30
ATR_00057G02270	Amborella trichopoda	2e-67	239	454	34.80
CR04G00090	Chlamydomonas reinhardtii	2e-65	243	372	37.90
AC00G00990	Asterochloris sp. Cgr-DA1pho v2.0	3e-59	221	400	32.75
emh567820	Emiliania huxleyi	7e-58	219	494	32.19
ATR_00057G02260	Amborella trichopoda	1e-56	201	196	51.53
ATR_00034G01300	Amborella trichopoda	2e-47	174	267	35.21
ATR_00002G04350	Amborella trichopoda	2e-46	173	328	30.18
CNC64A_030G00120	Chlorella sp NC64A	2e-43	163	277	37.18
ATR_00003G03830	Amborella trichopoda	2e-38	151	242	31.82
ATR_00049G01710	Amborella trichopoda	3e-32	130	245	32.65
ATR_00034G01260	Amborella trichopoda	3e-24	106	164	45.12
ATR_00034G01290	Amborella trichopoda	4e-24	107	262	28.63
ATR_00029G03120	Amborella trichopoda	3e-18	89.0	92	48.91
ATR_00070G01290	Amborella trichopoda	4e-11	66.2	51	50.98
AC00G24940	Asterochloris sp. Cgr-DA1pho v2.0	4e-10	63.9	157	29.30
ATR_00057G02250	Amborella trichopoda	1e-09	60.8	68	41.18

External Sequences (optional)

External Sequences Type

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MSA algorithm
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