Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS03G22120	Oryza sativa	0.0	1682	810	100.00
AT4G02280	Arabidopsis thaliana	0.0	1384	809	79.23
ATR_00106G00050	Amborella trichopoda	0.0	1345	807	79.06
AT5G49190	Arabidopsis thaliana	0.0	1285	802	74.69
OS06G09450	Oryza sativa	0.0	1203	802	70.57
OS03G28330	Oryza sativa	0.0	1196	802	70.45
OS07G42490	Oryza sativa	0.0	1187	802	68.83
AT3G43190	Arabidopsis thaliana	0.0	1167	802	68.95
PP00093G00500	Physcomitrella patens	0.0	1153	804	66.42
PP00303G00240	Physcomitrella patens	0.0	1146	805	68.70
PP00028G02030	Physcomitrella patens	0.0	1139	806	65.76
AT5G20830	Arabidopsis thaliana	0.0	1135	802	67.83
PP00120G00370	Physcomitrella patens	0.0	1097	776	65.98
ATR_00044G00210	Amborella trichopoda	0.0	978	811	57.71
OS02G58480	Oryza sativa	0.0	964	803	58.16
OS04G24430	Oryza sativa	0.0	962	807	57.25
AT1G73370	Arabidopsis thaliana	0.0	949	805	55.40
AT5G37180	Arabidopsis thaliana	0.0	924	799	54.82
CV00G95450	Coccomyxa subellipsoidea C-169	0.0	907	728	60.03
OS04G17650	Oryza sativa	0.0	905	750	58.40
PI00G03370	Picochlorum sp. SENEW3 (SE3)	0.0	874	803	52.80
RCC4223.04g06590	Picochlorum_RCC4223	0.0	870	801	52.56
HE0000G56330	Helicosporidium sp.	0.0	837	809	52.29
CNC64A_002G04500	Chlorella sp NC64A	0.0	756	736	52.58
AC00G61310	Asterochloris sp. Cgr-DA1pho v2.0	0.0	727	819	47.62
AP00G37470	Auxenochlorella protothecoides	0.0	619	504	59.72
AP00G37480	Auxenochlorella protothecoides	6e-113	358	400	47.25
AC00G44410	Asterochloris sp. Cgr-DA1pho v2.0	2e-39	158	540	27.22
OS02G09170	Oryza sativa	6e-39	160	520	28.08
AT4G10120	Arabidopsis thaliana	2e-38	158	512	26.76
PP00131G00600	Physcomitrella patens	1e-37	156	538	27.51
AT5G11110	Arabidopsis thaliana	4e-37	154	528	27.65
PP00066G01210	Physcomitrella patens	4e-37	154	538	27.51
OS08G20660	Oryza sativa	6e-37	154	530	26.60
ATR_00033G01740	Amborella trichopoda	8e-37	153	531	26.74
OS01G69030	Oryza sativa	1e-36	153	514	27.82
OS06G43630	Oryza sativa	1e-36	153	548	27.92
ATR_00099G00850	Amborella trichopoda	6e-36	150	527	24.67
AT1G04920	Arabidopsis thaliana	6e-34	144	520	26.92
AT5G20280	Arabidopsis thaliana	2e-32	139	528	25.00
RCC4223.05g02250	Picochlorum_RCC4223	7e-32	138	566	24.03
OS11G12810	Oryza sativa	1e-31	137	532	24.62
gsu138950	Galdieria sulphuraria	4e-28	125	509	24.36
HE0000G57540	Helicosporidium sp.	1e-27	122	472	25.21
CNC64A_014G03230	Chlorella sp NC64A	5e-24	111	193	33.68
PI00G14670	Picochlorum sp. SENEW3 (SE3)	9e-24	112	193	35.23
CR12G08850	Chlamydomonas reinhardtii	5e-22	106	190	33.16
AP00G64190	Auxenochlorella protothecoides	3e-19	97.4	191	32.98
CV00G68630	Coccomyxa subellipsoidea C-169	4e-17	90.9	201	30.85
CM20G01680	Cyanidioschyzon merolae	2e-09	64.7	201	24.88
AA0018G01130	Aureococcus anophagefferens	2e-09	64.3	193	29.02
ENSG00000119523	Homo sapiens	4e-08	60.5	213	24.88
DDB_G0272730	Dictyostelium discoideum	5e-08	60.1	210	22.38
ES0097G00100	Ectocarpus siliculosus	7e-08	60.1	194	28.35
phs317530	Phytophtora sojae	1e-07	59.3	213	28.17
AT1G78800	Arabidopsis thaliana	3e-07	57.4	192	23.96
PP00246G00410	Physcomitrella patens	6e-07	56.6	204	25.49
ccr138580	Chondrus crispus	1e-06	55.8	205	24.39
PTI_18G01360	Phaeodactylum tricornutum	2e-06	55.5	203	25.12
WBGene00017282	Caenorhabditis elegans	2e-06	54.7	233	25.75

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment