Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS03G19270	Oryza sativa	5e-138	390	193	100.00
ATR_00003G00120	Amborella trichopoda	3e-51	168	178	48.88
OS01G19820	Oryza sativa	2e-42	146	179	44.13
AT3G62550	Arabidopsis thaliana	1e-37	134	185	40.54
OS05G28740	Oryza sativa	1e-37	134	193	39.90
ATR_00135G00050	Amborella trichopoda	5e-23	96.3	182	33.52
ATR_00045G03170	Amborella trichopoda	7e-23	95.1	185	34.05
OS02G52314	Oryza sativa	2e-22	94.4	192	33.33
OS12G36630	Oryza sativa	3e-22	93.6	176	33.52
ATR_00003G00130	Amborella trichopoda	1e-21	90.1	110	45.45
OS07G47620	Oryza sativa	1e-21	92.0	176	34.09
AT2G47710	Arabidopsis thaliana	4e-21	90.5	176	35.80
ATR_00016G03410	Amborella trichopoda	6e-21	90.1	178	35.96
AT3G11930	Arabidopsis thaliana	2e-20	89.7	212	28.30
OS12G36640	Oryza sativa	2e-20	88.6	176	32.39
OS01G32780	Oryza sativa	2e-18	83.2	184	32.61
AT1G09740	Arabidopsis thaliana	7e-18	81.6	183	28.96
PP00098G01150	Physcomitrella patens	9e-18	82.4	183	31.69
AT1G68300	Arabidopsis thaliana	3e-17	80.1	187	30.48
ATR_00105G00370	Amborella trichopoda	4e-17	79.0	144	32.64
OS03G53900	Oryza sativa	5e-17	79.7	192	32.29
PP00034G01480	Physcomitrella patens	2e-16	82.0	183	32.24
PP00007G02290	Physcomitrella patens	2e-16	78.2	181	30.39
AT3G58450	Arabidopsis thaliana	3e-16	77.8	186	30.11
PP00171G00550	Physcomitrella patens	5e-16	77.4	181	29.28
ATR_00079G00520	Amborella trichopoda	3e-15	74.3	185	27.03
OS03G22390	Oryza sativa	2e-14	72.0	178	35.96
AT1G11360	Arabidopsis thaliana	4e-14	72.0	184	29.89
PP00336G00330	Physcomitrella patens	4e-13	70.5	190	30.53
OS10G30150	Oryza sativa	2e-11	63.5	187	29.95
OS05G06500	Oryza sativa	5e-11	62.0	200	28.50
OS05G12710	Oryza sativa	9e-11	60.5	77	44.16
OS01G63010	Oryza sativa	1e-10	60.8	182	29.12
OS02G47840	Oryza sativa	1e-10	61.2	186	24.73
PP00133G00110	Physcomitrella patens	5e-10	59.3	183	30.05
AT5G14680	Arabidopsis thaliana	8e-10	58.9	186	25.27
OS02G53320	Oryza sativa	2e-09	57.4	76	40.79
CV00G92270	Coccomyxa subellipsoidea C-169	2e-09	57.0	186	27.42
ATR_00072G00070	Amborella trichopoda	3e-09	58.2	169	28.99
AT3G01520	Arabidopsis thaliana	3e-09	57.0	165	25.45
ATR_00165G00230	Amborella trichopoda	5e-09	56.2	178	26.40
RCC4223.03g04700	Picochlorum_RCC4223	1e-08	55.8	179	29.05
PI00G55510	Picochlorum sp. SENEW3 (SE3)	2e-08	55.1	179	29.61
ATR_00085G00590	Amborella trichopoda	3e-08	54.3	69	43.48
MP03G02550	Micromonas pusilla strain CCMP1545	4e-08	54.7	184	25.00
OS01G57450	Oryza sativa	4e-08	55.5	178	27.53
AT3G53990	Arabidopsis thaliana	9e-08	52.8	178	25.84
BPRRCC1105_10G03230	Bathycoccus prasinos	9e-08	53.5	181	25.41
AT3G17020	Arabidopsis thaliana	1e-07	52.8	184	28.80
ATR_00045G01790	Amborella trichopoda	1e-07	52.4	182	26.92
ATR_00058G02030	Amborella trichopoda	1e-07	52.8	194	24.23
OS07G36600	Oryza sativa	2e-07	53.1	180	27.78
OT_04G00030	Ostreococcus tauri	3e-07	52.4	202	25.25
OS05G42230	Oryza sativa	4e-07	52.8	177	27.12
OS05G07810	Oryza sativa	9e-07	50.8	187	27.27
CNC64A_027G00190	Chlorella sp NC64A	1e-06	51.6	74	37.84
PI00G00700	Picochlorum sp. SENEW3 (SE3)	1e-06	51.2	199	26.13
PP00062G00920	Physcomitrella patens	3e-06	48.9	192	26.56
CR07G10420	Chlamydomonas reinhardtii	3e-06	50.4	187	26.74
PP00400G00060	Physcomitrella patens	3e-06	48.5	183	27.32
CR12G16810	Chlamydomonas reinhardtii	4e-06	48.5	186	26.88
VC00G35010	Volvox carteri	6e-06	49.3	188	27.66
PI00G66880	Picochlorum sp. SENEW3 (SE3)	6e-06	47.8	186	27.42

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment