Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS02G57220	Oryza sativa	0.0	779	376	100.00
AT2G31300	Arabidopsis thaliana	0.0	558	372	72.31
AT2G30910	Arabidopsis thaliana	0.0	553	372	71.24
PP00017G00270	Physcomitrella patens	3e-157	454	382	57.07
PP00020G01760	Physcomitrella patens	9e-156	453	376	56.91
ATR_00039G01590	Amborella trichopoda	2e-122	363	220	75.00
DDB_G0277825	Dictyostelium discoideum	2e-105	322	365	45.21
phs247040	Phytophtora sojae	9e-96	298	372	42.74
ENSG00000130429	Homo sapiens	1e-92	289	367	41.42
ES0165G00210	Ectocarpus siliculosus	1e-83	266	370	39.73
WBGene00000201	Caenorhabditis elegans	1e-82	263	358	38.27
AA0014G01890	Aureococcus anophagefferens	7e-79	253	359	38.72
FBgn0001961	Drosophila melanogaster	7e-76	246	367	38.69
emh586930	Emiliania huxleyi	1e-72	238	370	37.57
SPBC14C8.06	Schizosaccharomyces pombe	6e-68	225	372	34.14
YBR234C	Saccharomyces cerevisiae strain S288C	2e-51	182	382	32.20
CV00G39440	Coccomyxa subellipsoidea C-169	4e-51	179	294	36.39
AC00G93820	Asterochloris sp. Cgr-DA1pho v2.0	1e-44	162	309	36.89
CR16G01420	Chlamydomonas reinhardtii	2e-37	144	179	37.43
AP00G57510	Auxenochlorella protothecoides	6e-33	132	407	26.78
pte659420	Paramecium tetraurelia	2e-30	124	373	28.69
pte749360	Paramecium tetraurelia	3e-27	115	281	28.83
HE0000G57270	Helicosporidium sp.	6e-20	94.0	433	23.79
VC00G14700	Volvox carteri	2e-14	78.6	136	29.41
SPAC806.02c	Schizosaccharomyces pombe	3e-09	62.8	152	28.29
ccr66760	Chondrus crispus	3e-08	59.7	276	24.64
ES0330G00110	Ectocarpus siliculosus	2e-07	56.2	198	26.26
RCC4223.12g00490	Picochlorum_RCC4223	4e-07	55.5	166	25.90
phs293540	Phytophtora sojae	5e-07	55.1	248	25.40
AA0002G03770	Aureococcus anophagefferens	6e-07	54.7	130	30.77
emh604770	Emiliania huxleyi	6e-07	55.5	204	24.02
CNC64A_002G02670	Chlorella sp NC64A	6e-07	54.7	167	25.15
DDB_G0269728	Dictyostelium discoideum	7e-07	54.7	165	23.03
PI00G17370	Picochlorum sp. SENEW3 (SE3)	7e-07	54.7	166	25.90
MP15G01770	Micromonas pusilla strain CCMP1545	7e-07	54.7	127	29.13
VC00G12810	Volvox carteri	1e-06	55.1	240	25.83
AP00G50950	Auxenochlorella protothecoides	1e-06	53.5	269	23.42
AC00G40170	Asterochloris sp. Cgr-DA1pho v2.0	2e-06	53.5	295	23.73
pte323180	Paramecium tetraurelia	2e-06	54.3	221	25.34
pte198410	Paramecium tetraurelia	2e-06	53.1	156	25.64
pte109640	Paramecium tetraurelia	2e-06	53.9	282	24.47
AA0002G01340	Aureococcus anophagefferens	2e-06	52.4	176	26.14
FBgn0033972	Drosophila melanogaster	3e-06	52.8	157	23.57
ENSG00000071127	Homo sapiens	4e-06	52.8	225	22.22
pte06070	Paramecium tetraurelia	6e-06	52.0	238	24.79

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment