Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS02G55910	Oryza sativa	0.0	1051	509	100.00
AT5G20410	Arabidopsis thaliana	0.0	637	413	75.79
ATR_00033G01690	Amborella trichopoda	0.0	635	414	77.05
AT2G11810	Arabidopsis thaliana	0.0	624	402	74.38
OS08G20420	Oryza sativa	0.0	611	390	74.62
ATR_00019G00480	Amborella trichopoda	0.0	531	425	61.18
OS09G25580	Oryza sativa	4e-179	521	407	62.90
AT4G31780	Arabidopsis thaliana	2e-178	520	406	62.81
PP00033G01380	Physcomitrella patens	3e-171	502	380	60.00
PP00020G00310	Physcomitrella patens	8e-166	488	423	57.92
MP02G03280	Micromonas pusilla strain CCMP1545	6e-122	374	457	42.89
OM_04G02190	Ostreococcus mediterraneus	1e-121	371	382	48.43
OL02G02590	Ostreococcus lucimarinus	1e-119	368	392	46.17
OL02G02600	Ostreococcus lucimarinus	7e-118	359	380	46.84
OT_02G01750	Ostreococcus tauri	5e-114	353	399	44.61
AC00G79110	Asterochloris sp. Cgr-DA1pho v2.0	2e-113	347	377	46.15
MRCC299_01G04520	Micromonas sp RCC299	3e-113	351	380	46.32
ORCC809_02G01340	Ostreococcus sp RCC809	7e-113	347	386	45.60
CV00G79840	Coccomyxa subellipsoidea C-169	6e-112	344	372	46.24
CR13G05340	Chlamydomonas reinhardtii	3e-111	348	388	45.62
RCC4223.02g07290	Picochlorum_RCC4223	2e-108	339	384	46.35
PI00G60530	Picochlorum sp. SENEW3 (SE3)	6e-108	338	384	46.09
BPRRCC1105_14G01530	Bathycoccus prasinos	2e-103	326	377	43.50
VC00G09440	Volvox carteri	1e-93	303	438	38.81
ES0104G00450	Ectocarpus siliculosus	3e-91	298	393	43.26
Naga_100092g5	Nannochloropsis gaditana	2e-90	296	386	41.97
gsu67990	Galdieria sulphuraria	2e-89	291	398	42.71
emh719300	Emiliania huxleyi	2e-80	265	408	37.50
AA0003G04170	Aureococcus anophagefferens	3e-77	254	399	37.84
ccr147740	Chondrus crispus	3e-76	251	366	39.34
ES0104G00190	Ectocarpus siliculosus	2e-74	252	407	39.07
ES0198G00200	Ectocarpus siliculosus	9e-74	249	352	37.22
ccr100120	Chondrus crispus	3e-73	248	381	39.37
AA0006G04190	Aureococcus anophagefferens	8e-72	239	381	39.11
CM09G02710	Cyanidioschyzon merolae	7e-71	245	427	35.83
TP07G04200	Thalassiosira pseudonana	3e-69	233	407	39.80
PTI_13G01220	Phaeodactylum tricornutum	6e-67	231	402	37.31
PTI_13G01230	Phaeodactylum tricornutum	1e-66	231	402	37.31
ccr100180	Chondrus crispus	6e-66	224	301	43.52
AA0016G01990	Aureococcus anophagefferens	1e-64	220	360	37.78
emh136760	Emiliania huxleyi	2e-60	214	464	31.90
emh309700	Emiliania huxleyi	7e-60	215	371	35.85
PTI_03G02250	Phaeodactylum tricornutum	1e-58	209	524	30.15
FC006G07400	Fragilariopsis cylindrus	4e-58	205	435	32.64
FC042G01130	Fragilariopsis cylindrus	2e-56	199	393	32.82
TP15G01710	Thalassiosira pseudonana	6e-56	198	390	34.36
AP00G06960	Auxenochlorella protothecoides	6e-47	167	179	46.93
PTI_01G07030	Phaeodactylum tricornutum	3e-33	136	302	31.13
ATR_00051G00150	Amborella trichopoda	8e-32	122	85	61.18
gsu18050	Galdieria sulphuraria	2e-11	70.1	415	23.13
gsu134280	Galdieria sulphuraria	5e-10	65.5	424	21.23
AP00G06970	Auxenochlorella protothecoides	2e-07	54.3	80	38.75

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment