Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS02G40830	Oryza sativa	0.0	853	423	100.00
AT2G20420	Arabidopsis thaliana	0.0	745	418	85.89
ATR_00067G00980	Amborella trichopoda	0.0	658	373	84.45
PP00009G00500	Physcomitrella patens	0.0	606	406	74.38
AC00G14680	Asterochloris sp. Cgr-DA1pho v2.0	0.0	566	400	69.50
AP00G46120	Auxenochlorella protothecoides	0.0	555	399	69.17
CV00G27050	Coccomyxa subellipsoidea C-169	0.0	550	418	67.94
CR17G01720	Chlamydomonas reinhardtii	0.0	543	418	66.75
MP06G04290	Micromonas pusilla strain CCMP1545	0.0	541	416	65.87
RCC4223.03g08300	Picochlorum_RCC4223	0.0	537	399	69.92
PI00G29480	Picochlorum sp. SENEW3 (SE3)	0.0	533	399	69.67
VC00G52880	Volvox carteri	0.0	530	398	66.83
MRCC299_01G04430	Micromonas sp RCC299	0.0	529	396	65.66
OM_02G04740	Ostreococcus mediterraneus	0.0	523	391	66.50
OL04G04330	Ostreococcus lucimarinus	5e-178	511	398	65.33
FC008G02230	Fragilariopsis cylindrus	2e-177	509	426	61.03
AA0014G01230	Aureococcus anophagefferens	1e-171	494	408	59.56
BPRRCC1105_08G04030	Bathycoccus prasinos	1e-170	495	399	63.16
ORCC809_04G00970	Ostreococcus sp RCC809	1e-167	483	377	64.72
OT_04G04450	Ostreococcus tauri	2e-167	483	410	62.93
gsu97290	Galdieria sulphuraria	2e-163	474	399	56.89
Naga_100047g7	Nannochloropsis gaditana	8e-155	452	398	55.53
ccr158440	Chondrus crispus	2e-154	451	396	56.82
emh552570	Emiliania huxleyi	4e-154	451	432	56.02
DDB_G0274449	Dictyostelium discoideum	4e-154	450	396	58.33
DDB_G0271842	Dictyostelium discoideum	8e-153	447	396	55.05
TP01G09560	Thalassiosira pseudonana	5e-151	442	396	54.29
phs292920	Phytophtora sojae	7e-150	440	401	56.61
PTI_06G04240	Phaeodactylum tricornutum	6e-148	435	400	54.00
CM20G02100	Cyanidioschyzon merolae	4e-147	434	434	52.07
ENSG00000136143	Homo sapiens	2e-144	427	423	51.54
ES0040G00230	Ectocarpus siliculosus	2e-144	427	410	51.46
WBGene00009812	Caenorhabditis elegans	4e-133	397	417	50.12
SPCC1620.08	Schizosaccharomyces pombe	3e-132	395	421	47.51
FBgn0037643	Drosophila melanogaster	8e-131	393	397	51.64
ENSMUSG00000061838	Mus musculus	8e-131	391	400	50.75
FBgn0029118	Drosophila melanogaster	7e-130	388	411	50.85
pte286110	Paramecium tetraurelia	3e-128	384	408	50.98
pte166370	Paramecium tetraurelia	7e-127	380	408	50.74
WBGene00016844	Caenorhabditis elegans	5e-126	378	404	49.50
pte237840	Paramecium tetraurelia	5e-126	379	408	49.75
pte510740	Paramecium tetraurelia	1e-125	377	409	50.12
YGR244C	Saccharomyces cerevisiae strain S288C	3e-121	366	400	45.25
FC017G02430	Fragilariopsis cylindrus	2e-120	367	439	44.87
ENSG00000172340	Homo sapiens	2e-119	362	390	49.74
pte758480	Paramecium tetraurelia	6e-106	327	406	44.58
pte615520	Paramecium tetraurelia	4e-105	325	406	43.60
pte445710	Paramecium tetraurelia	6e-105	324	409	44.25
HE0000G10930	Helicosporidium sp.	4e-96	295	257	58.37
CNC64A_027G00610	Chlorella sp NC64A	2e-85	270	409	42.54
HE0000G33690	Helicosporidium sp.	3e-78	246	152	80.26
PTI_08G01790	Phaeodactylum tricornutum	2e-10	66.6	411	24.82
VC00G76660	Volvox carteri	2e-09	63.5	447	23.04
DDB_G0278341	Dictyostelium discoideum	3e-09	62.8	383	22.72
Naga_100024g24	Nannochloropsis gaditana	4e-09	62.8	419	24.82
gsu111420	Galdieria sulphuraria	8e-09	61.2	366	27.05
CR05G02340	Chlamydomonas reinhardtii	5e-08	58.9	376	24.20

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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