Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS02G36210	Oryza sativa	0.0	1653	801	100.00
OS04G09900	Oryza sativa	0.0	822	813	53.01
OS02G17780	Oryza sativa	0.0	684	771	47.21
ATR_00103G00200	Amborella trichopoda	0.0	586	658	45.90
AT4G02780	Arabidopsis thaliana	0.0	574	849	38.75
PP00130G00020	Physcomitrella patens	2e-154	480	506	47.23
PP00130G00120	Physcomitrella patens	9e-115	373	506	40.32
OS09G15050	Oryza sativa	8e-88	286	324	48.77
ATR_00011G01150	Amborella trichopoda	4e-85	281	331	41.69
ATR_00032G02080	Amborella trichopoda	4e-73	262	494	33.20
PP00040G00330	Physcomitrella patens	3e-64	221	323	40.56
PP00081G00380	Physcomitrella patens	2e-61	213	289	39.10
AT1G79460	Arabidopsis thaliana	6e-61	225	514	31.71
OS02G36220	Oryza sativa	3e-59	220	515	30.10
OS04G10060	Oryza sativa	2e-58	218	571	29.25
OS02G36140	Oryza sativa	6e-58	216	513	31.58
OS12G30824	Oryza sativa	5e-57	213	506	29.84
OS02G36264	Oryza sativa	2e-56	211	496	31.45
OS04G52230	Oryza sativa	6e-56	210	498	29.32
OS11G28530	Oryza sativa	1e-46	182	493	27.38
OS04G52240	Oryza sativa	2e-43	169	486	27.78
OS04G52210	Oryza sativa	4e-41	165	508	26.77
ATR_00066G01950	Amborella trichopoda	2e-40	163	609	25.94
AT1G61120	Arabidopsis thaliana	7e-35	147	780	24.10
PP00167G00390	Physcomitrella patens	2e-17	85.9	126	35.71
OS12G30800	Oryza sativa	2e-17	86.7	144	34.03
ATR_00003G03080	Amborella trichopoda	2e-16	83.6	101	42.57
ATR_00043G00500	Amborella trichopoda	3e-16	87.0	214	34.58
PP00001G02410	Physcomitrella patens	5e-16	82.0	178	28.65
ATR_00043G00450	Amborella trichopoda	1e-15	84.3	256	30.86
PP00001G02400	Physcomitrella patens	5e-14	73.6	80	47.50
ATR_00003G03050	Amborella trichopoda	1e-12	75.5	233	30.90
OS09G15060	Oryza sativa	1e-12	72.4	73	45.21
ATR_00260G00020	Amborella trichopoda	2e-12	71.6	143	31.47
AT5G23960	Arabidopsis thaliana	5e-12	73.2	274	25.55
OS03G22634	Oryza sativa	7e-12	73.2	272	25.00
PP00138G00380	Physcomitrella patens	1e-11	68.9	120	32.50
AT3G25810	Arabidopsis thaliana	1e-11	72.0	278	26.98
OS07G11790	Oryza sativa	2e-11	71.6	265	27.92
OS04G01810	Oryza sativa	3e-11	70.5	261	27.97
OS04G27070	Oryza sativa	5e-10	66.6	220	27.73
AT2G24210	Arabidopsis thaliana	6e-10	66.6	277	23.47
ATR_00032G02230	Amborella trichopoda	7e-10	66.2	516	22.09
OS04G26960	Oryza sativa	8e-10	66.2	273	25.64
ATR_00007G03950	Amborella trichopoda	1e-09	65.5	216	27.31
ATR_00043G00480	Amborella trichopoda	4e-09	60.5	104	35.58
ATR_00066G01460	Amborella trichopoda	4e-09	64.3	272	25.74
OS03G24680	Oryza sativa	5e-09	63.9	259	26.25
OS03G24760	Oryza sativa	1e-08	62.0	219	28.31
ATR_00003G03070	Amborella trichopoda	2e-08	58.2	80	40.00
OS01G23530	Oryza sativa	2e-08	61.6	269	26.02
ATR_00007G03960	Amborella trichopoda	4e-08	60.5	216	26.39
OS03G31430	Oryza sativa	5e-08	60.5	279	27.24
OS04G27790	Oryza sativa	6e-08	60.1	266	25.19
OS04G27400	Oryza sativa	8e-08	59.7	219	26.03
AT3G25820	Arabidopsis thaliana	2e-07	58.9	251	25.10
AT3G25830	Arabidopsis thaliana	2e-07	58.9	251	25.10
AT3G32030	Arabidopsis thaliana	7e-07	57.0	295	23.39
OS08G07100	Oryza sativa	7e-07	56.6	255	24.31
AT4G16730	Arabidopsis thaliana	1e-06	55.8	298	24.83
OS03G24690	Oryza sativa	1e-06	55.8	260	23.85
ATR_00003G03060	Amborella trichopoda	4e-06	50.8	71	43.66
OS05G24500	Oryza sativa	4e-06	52.0	219	24.20
ATR_00032G02210	Amborella trichopoda	6e-06	53.5	265	23.40
AT3G29410	Arabidopsis thaliana	6e-06	53.9	307	23.13

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment