Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OS02G19790	Oryza sativa	0.0	607	297	100.00
OS03G49350	Oryza sativa	1e-52	188	156	60.90
OS03G52860	Oryza sativa	3e-52	188	151	60.93
OS03G49380	Oryza sativa	4e-51	185	153	62.09
OS03G49260	Oryza sativa	5e-50	182	151	58.28
AT3G22400	Arabidopsis thaliana	6e-45	167	149	56.38
ATR_00103G00230	Amborella trichopoda	8e-44	156	146	54.11
AT1G55020	Arabidopsis thaliana	1e-43	164	161	51.55
ATR_00022G02900	Amborella trichopoda	1e-42	152	146	52.74
OS11G36719	Oryza sativa	4e-42	159	150	54.00
OS06G04420	Oryza sativa	8e-34	125	81	80.25
ATR_00066G00560	Amborella trichopoda	3e-33	134	151	45.03
OS05G23880	Oryza sativa	2e-27	117	157	41.40
PP00232G00410	Physcomitrella patens	1e-25	112	157	40.13
PP00021G01990	Physcomitrella patens	3e-23	105	158	37.34
AT1G72520	Arabidopsis thaliana	8e-23	103	148	37.84
ATR_00022G02400	Amborella trichopoda	2e-22	102	152	35.53
PP00505G00140	Physcomitrella patens	4e-22	97.8	195	32.82
PP00312G00290	Physcomitrella patens	4e-22	98.6	151	35.76
PP00171G00680	Physcomitrella patens	7e-22	100	158	36.71
AT1G17420	Arabidopsis thaliana	1e-21	99.8	147	36.73
PP00097G01010	Physcomitrella patens	7e-21	97.4	156	35.90
PP00434G00160	Physcomitrella patens	8e-21	97.4	152	36.84
PP00036G01900	Physcomitrella patens	8e-21	97.4	169	34.32
ATR_00024G02970	Amborella trichopoda	4e-20	94.7	147	37.41
ATR_00022G02410	Amborella trichopoda	1e-19	90.5	152	32.89
PP00070G00750	Physcomitrella patens	2e-19	93.2	170	34.12
ATR_00022G02450	Amborella trichopoda	3e-19	92.4	152	33.55
AT1G67560	Arabidopsis thaliana	8e-19	90.9	153	32.68
PP00419G00050	Physcomitrella patens	3e-18	89.4	166	33.13
OS02G10120	Oryza sativa	7e-18	88.2	158	34.81
ATR_00049G02180	Amborella trichopoda	2e-17	87.0	161	32.92
AT3G45140	Arabidopsis thaliana	2e-17	86.7	169	31.95
OS12G37350	Oryza sativa	2e-16	82.8	176	32.39
OS12G37260	Oryza sativa	4e-16	82.8	180	32.22
OS03G08220	Oryza sativa	4e-16	82.4	160	35.00
PP00419G00010	Physcomitrella patens	1e-15	81.3	189	29.63
OS08G39840	Oryza sativa	2e-14	77.4	163	35.58
OS08G39850	Oryza sativa	3e-14	76.6	163	35.58
PP00419G00020	Physcomitrella patens	3e-14	76.6	127	33.86
PP00419G00030	Physcomitrella patens	3e-14	76.6	127	33.86
CV00G27150	Coccomyxa subellipsoidea C-169	2e-13	74.7	179	30.73
CV00G19880	Coccomyxa subellipsoidea C-169	5e-13	73.2	159	31.45
AC00G29780	Asterochloris sp. Cgr-DA1pho v2.0	3e-10	63.9	167	32.34
VC00G90090	Volvox carteri	6e-07	54.7	107	36.45
VC00G90100	Volvox carteri	2e-06	53.1	199	26.13
CR12G02920	Chlamydomonas reinhardtii	3e-06	52.8	158	27.85
VC00G96880	Volvox carteri	3e-06	52.8	130	28.46
PP00190G00290	Physcomitrella patens	5e-06	52.0	75	40.00
VC00G96890	Volvox carteri	8e-06	51.2	137	27.01

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment