Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
OM_02G04980	Ostreococcus mediterraneus	0.0	3020	1483	100.00
OL04G04560	Ostreococcus lucimarinus	0.0	1687	1450	61.66
ORCC809_04G00780	Ostreococcus sp RCC809	0.0	1600	1455	60.00
MRCC299_11G01230	Micromonas sp RCC299	2e-164	548	1428	33.26
BPRRCC1105_08G04310	Bathycoccus prasinos	2e-129	446	1008	31.75
MP08G04830	Micromonas pusilla strain CCMP1545	4e-114	402	1131	32.80
CV00G09710	Coccomyxa subellipsoidea C-169	5e-68	258	1086	30.76
OT_04G04720	Ostreococcus tauri	4e-65	248	678	31.12
FC021G02540	Fragilariopsis cylindrus	2e-58	227	1016	24.02
AC00G13320	Asterochloris sp. Cgr-DA1pho v2.0	4e-56	211	599	28.71
ENSG00000066279	Homo sapiens	3e-55	217	1211	24.28
PP00018G01650	Physcomitrella patens	4e-54	213	1034	24.66
TP02G06180	Thalassiosira pseudonana	4e-54	213	1038	24.86
CNC64A_024G01620	Chlorella sp NC64A	1e-43	178	915	29.18
PTI_07G01790	Phaeodactylum tricornutum	1e-39	165	804	26.37
ATR_00062G01260	Amborella trichopoda	1e-36	154	532	26.69
AT4G21820	Arabidopsis thaliana	1e-35	152	336	29.76
RCC4223.16g01040	Picochlorum_RCC4223	8e-35	149	772	26.30
OS07G33370	Oryza sativa	5e-33	143	383	28.72
FBgn0000140	Drosophila melanogaster	2e-32	142	370	27.03
PI00G67870	Picochlorum sp. SENEW3 (SE3)	3e-31	138	752	25.00
VC00G68250	Volvox carteri	3e-30	135	865	25.09
ES0037G00050	Ectocarpus siliculosus	1e-24	117	398	27.64
Naga_100044g28	Nannochloropsis gaditana	7e-23	110	380	25.79
CR06G09270	Chlamydomonas reinhardtii	8e-23	110	661	26.78
AP00G13770	Auxenochlorella protothecoides	3e-21	105	280	33.21
emh401500	Emiliania huxleyi	6e-20	101	251	30.68
phs325900	Phytophtora sojae	9e-18	94.4	380	28.95
FC002G06570	Fragilariopsis cylindrus	1e-13	80.5	445	27.64
phs262200	Phytophtora sojae	7e-13	78.2	1212	20.30
BPRRCC1105_17G01040	Bathycoccus prasinos	2e-11	73.6	331	28.40
MP09G00160	Micromonas pusilla strain CCMP1545	2e-11	73.2	346	29.77
AT1G17580	Arabidopsis thaliana	4e-11	72.4	217	31.80
PP00131G00700	Physcomitrella patens	6e-11	72.0	161	36.65
Naga_100017g9	Nannochloropsis gaditana	6e-11	72.0	392	27.55
PP00022G01080	Physcomitrella patens	7e-11	71.2	334	27.25
PTI_00G02680	Phaeodactylum tricornutum	7e-11	71.6	341	25.81
PTI_03G05390	Phaeodactylum tricornutum	2e-10	70.5	266	25.94
FBgn0014141	Drosophila melanogaster	6e-10	68.6	204	26.96
FC007G01910	Fragilariopsis cylindrus	6e-10	68.6	450	27.78
PP00066G01160	Physcomitrella patens	7e-10	68.2	183	32.79
TP02G10290	Thalassiosira pseudonana	1e-09	67.8	416	25.72
WBGene00006876	Caenorhabditis elegans	2e-09	67.0	203	29.06
VC00G51360	Volvox carteri	6e-09	65.5	246	31.71
ENSG00000128591	Homo sapiens	6e-09	65.1	198	28.28
WBGene00002036	Caenorhabditis elegans	9e-09	64.7	200	31.00
ATR_00024G02560	Amborella trichopoda	9e-09	64.7	136	36.03
AT1G04160	Arabidopsis thaliana	1e-08	64.3	216	31.94
ENSG00000178209	Homo sapiens	1e-08	63.9	262	22.90
ENSMUSG00000039585	Mus musculus	2e-08	63.9	150	30.67
ENSMUSG00000022565	Mus musculus	2e-08	63.9	262	22.52
ATR_00146G00340	Amborella trichopoda	7e-08	61.6	169	30.77
PI00G12000	Picochlorum sp. SENEW3 (SE3)	8e-08	61.6	310	25.16
RCC4223.11g00410	Picochlorum_RCC4223	1e-07	61.2	154	29.87
AT5G20490	Arabidopsis thaliana	2e-07	60.1	215	32.56
AT3G58160	Arabidopsis thaliana	2e-07	59.7	190	28.42
CR16G03650	Chlamydomonas reinhardtii	2e-07	60.1	149	33.56
AT5G43900	Arabidopsis thaliana	4e-07	59.3	216	32.41
BPRRCC1105_07G00530	Bathycoccus prasinos	5e-07	58.5	230	30.43
ENSMUSG00000025885	Mus musculus	7e-07	58.5	310	23.87
PTI_07G00500	Phaeodactylum tricornutum	8e-07	58.2	197	29.95
TP24G00180	Thalassiosira pseudonana	8e-07	58.2	375	24.53
ENSG00000128833	Homo sapiens	1e-06	57.8	178	28.65
ENSMUSG00000033590	Mus musculus	1e-06	57.8	178	28.65
phs359900	Phytophtora sojae	1e-06	57.8	286	28.67
ENSG00000151914	Homo sapiens	1e-06	57.8	195	26.15
ENSMUSG00000028649	Mus musculus	1e-06	57.8	267	25.84
AT2G20290	Arabidopsis thaliana	1e-06	57.4	166	33.13
CV00G45470	Coccomyxa subellipsoidea C-169	2e-06	57.4	180	30.56
gsu140770	Galdieria sulphuraria	2e-06	57.0	319	26.02
ENSMUSG00000096054	Mus musculus	2e-06	57.0	279	21.86
ENSMUSG00000103888	Mus musculus	2e-06	57.0	195	26.67
ENSG00000167306	Homo sapiens	3e-06	56.6	313	25.56
ENSMUSG00000034593	Mus musculus	3e-06	56.6	197	25.89
OS02G57190	Oryza sativa	4e-06	55.8	189	29.10
TP01G08920	Thalassiosira pseudonana	4e-06	55.8	260	26.92
ES0038G00280	Ectocarpus siliculosus	8e-06	55.1	191	30.89
PTI_01G02630	Phaeodactylum tricornutum	1e-05	54.7	279	25.81

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment