Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
MRCC299_10G04230	Micromonas sp RCC299	0.0	1019	488	100.00
MP16G01280	Micromonas pusilla strain CCMP1545	0.0	690	487	68.17
OM_17G00960	Ostreococcus mediterraneus	0.0	618	486	60.49
OL16G00900	Ostreococcus lucimarinus	0.0	596	487	59.14
OT_17G00830	Ostreococcus tauri	0.0	585	492	57.93
BPRRCC1105_06G01240	Bathycoccus prasinos	0.0	573	500	56.80
ORCC809_16G01780	Ostreococcus sp RCC809	0.0	545	488	55.33
AC00G27820	Asterochloris sp. Cgr-DA1pho v2.0	5e-175	510	489	51.33
CV00G12800	Coccomyxa subellipsoidea C-169	2e-171	502	488	50.61
PI00G51280	Picochlorum sp. SENEW3 (SE3)	1e-164	487	490	47.96
RCC4223.04g03450	Picochlorum_RCC4223	2e-162	482	498	47.39
AP00G21430	Auxenochlorella protothecoides	2e-162	481	492	50.00
HE0000G41170	Helicosporidium sp.	6e-155	462	490	49.59
CV00G12810	Coccomyxa subellipsoidea C-169	4e-150	443	440	52.50
CNC64A_025G01180	Chlorella sp NC64A	2e-133	407	494	45.14
PP00036G00370	Physcomitrella patens	1e-129	394	495	41.41
PP00065G00990	Physcomitrella patens	3e-129	393	495	40.81
PP00036G01070	Physcomitrella patens	6e-129	392	496	41.33
AT1G23480	Arabidopsis thaliana	6e-126	385	488	40.78
AT1G24070	Arabidopsis thaliana	7e-126	385	494	40.89
PP00162G00740	Physcomitrella patens	1e-124	386	517	41.39
PP00373G00150	Physcomitrella patens	2e-124	385	518	40.54
PP00224G00220	Physcomitrella patens	3e-124	385	521	40.12
PP00019G01110	Physcomitrella patens	1e-123	384	412	45.39
AT4G13410	Arabidopsis thaliana	1e-121	373	488	38.93
ATR_00040G02570	Amborella trichopoda	3e-121	372	488	39.55
OS07G43710	Oryza sativa	4e-121	374	489	39.88
AT5G22740	Arabidopsis thaliana	7e-121	371	494	38.66
AT5G03760	Arabidopsis thaliana	8e-121	371	488	38.93
PP00089G01080	Physcomitrella patens	5e-120	374	484	41.12
OS06G42020	Oryza sativa	3e-119	367	493	38.54
AT5G16190	Arabidopsis thaliana	2e-118	362	441	41.95
AT3G07330	Arabidopsis thaliana	3e-118	369	494	38.87
OS03G07350	Oryza sativa	1e-117	363	504	37.30
AT2G35650	Arabidopsis thaliana	1e-116	361	475	39.79
AT4G31590	Arabidopsis thaliana	3e-116	364	486	41.15
OS02G09930	Oryza sativa	3e-116	359	454	41.63
AT3G28180	Arabidopsis thaliana	2e-115	362	490	40.00
OS03G56060	Oryza sativa	2e-115	355	453	43.71
AT2G24630	Arabidopsis thaliana	1e-114	360	462	41.56
AT4G07960	Arabidopsis thaliana	1e-114	360	479	41.34
OS03G26044	Oryza sativa	2e-113	353	494	38.46
AT3G56000	Arabidopsis thaliana	2e-113	352	444	39.64
OS02G51060	Oryza sativa	3e-113	352	486	39.92
ATR_00065G00270	Amborella trichopoda	3e-113	357	410	43.90
OS08G33740	Oryza sativa	3e-113	353	535	37.38
ATR_00019G01680	Amborella trichopoda	4e-113	356	510	38.43
OS08G15420	Oryza sativa	2e-112	356	364	47.25
PP00015G00680	Physcomitrella patens	4e-112	353	412	42.48
OS05G43530	Oryza sativa	4e-112	353	479	41.75
OS07G03260	Oryza sativa	7e-112	353	509	40.47
OS01G56130	Oryza sativa	6e-111	350	457	43.33
OS09G25900	Oryza sativa	2e-110	349	388	43.56
PP00164G00010	Physcomitrella patens	1e-108	344	412	42.96
AT4G16590	Arabidopsis thaliana	3e-108	334	398	41.46
OS10G26630	Oryza sativa	8e-108	337	443	40.41
ATR_00013G02120	Amborella trichopoda	2e-103	330	384	42.45
OS06G12460	Oryza sativa	4e-93	301	377	40.58
ATR_00072G01360	Amborella trichopoda	5e-92	290	313	44.41
CR06G04470	Chlamydomonas reinhardtii	3e-82	274	369	39.57
VC00G68920	Volvox carteri	2e-81	270	367	38.42
OS09G26770	Oryza sativa	2e-50	185	345	33.62
emh181270	Emiliania huxleyi	2e-41	156	261	41.76
emh488170	Emiliania huxleyi	2e-41	156	261	41.76
OM_13G00450	Ostreococcus mediterraneus	9e-23	105	358	27.09
OL20G02910	Ostreococcus lucimarinus	2e-20	99.0	242	30.99
OT_14G02980	Ostreococcus tauri	2e-20	98.6	281	32.03
ORCC809_20G02860	Ostreococcus sp RCC809	7e-20	97.1	377	27.06
AC00G21830	Asterochloris sp. Cgr-DA1pho v2.0	3e-14	79.3	314	25.80
PP00372G00370	Physcomitrella patens	4e-12	72.4	318	24.53
ES0097G00210	Ectocarpus siliculosus	5e-12	72.8	301	26.58
ES0097G00300	Ectocarpus siliculosus	1e-11	71.6	287	25.78
emh647580	Emiliania huxleyi	2e-11	70.1	281	24.20
ES0200G00060	Ectocarpus siliculosus	4e-11	69.3	282	26.95
PI00G60790	Picochlorum sp. SENEW3 (SE3)	6e-11	68.9	267	24.34
DDB_G0269124	Dictyostelium discoideum	9e-09	62.0	172	26.16
CV00G28250	Coccomyxa subellipsoidea C-169	3e-08	60.5	355	23.66
AC00G54710	Asterochloris sp. Cgr-DA1pho v2.0	6e-08	59.3	336	24.40
CV00G13860	Coccomyxa subellipsoidea C-169	1e-07	58.5	355	23.66
PI00G34600	Picochlorum sp. SENEW3 (SE3)	2e-07	57.8	281	22.78
ES0185G00090	Ectocarpus siliculosus	3e-07	57.4	310	24.19
AC00G66050	Asterochloris sp. Cgr-DA1pho v2.0	6e-07	56.2	268	23.88
RCC4223.10g00870	Picochlorum_RCC4223	2e-06	54.7	249	22.49
PI00G46760	Picochlorum sp. SENEW3 (SE3)	4e-06	53.9	296	24.32
RCC4223.10g01020	Picochlorum_RCC4223	9e-06	52.8	218	24.31

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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