Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
MRCC299_04G04580	Micromonas sp RCC299	0.0	2153	1037	100.00
ORCC809_06G04200	Ostreococcus sp RCC809	0.0	1177	1059	59.11
OL03G03010	Ostreococcus lucimarinus	0.0	1171	1054	60.25
OM_09G03190	Ostreococcus mediterraneus	0.0	1164	1165	55.97
OT_03G03070	Ostreococcus tauri	0.0	1098	1035	58.36
MP05G03560	Micromonas pusilla strain CCMP1545	0.0	998	694	74.93
PP00112G00240	Physcomitrella patens	0.0	870	1028	48.35
ATR_00054G00710	Amborella trichopoda	0.0	870	1045	47.18
PP00070G01260	Physcomitrella patens	0.0	870	1047	47.47
OS03G48300	Oryza sativa	0.0	863	1045	48.04
PI00G33720	Picochlorum sp. SENEW3 (SE3)	0.0	860	1106	47.38
AC00G52180	Asterochloris sp. Cgr-DA1pho v2.0	0.0	851	1033	47.73
AT3G01310	Arabidopsis thaliana	0.0	851	1037	46.87
AT5G15070	Arabidopsis thaliana	0.0	850	1048	45.80
RCC4223.09g01180	Picochlorum_RCC4223	0.0	852	1102	46.73
CNC64A_005G01870	Chlorella sp NC64A	0.0	833	1061	46.94
OS01G56980	Oryza sativa	0.0	813	1069	45.37
CV00G92490	Coccomyxa subellipsoidea C-169	0.0	654	658	53.95
phs362880	Phytophtora sojae	0.0	641	1130	38.41
TP02G08430	Thalassiosira pseudonana	0.0	610	1049	37.56
FBgn0027279	Drosophila melanogaster	0.0	632	1037	40.31
ENSG00000145725	Homo sapiens	0.0	582	1045	38.47
WBGene00018508	Caenorhabditis elegans	0.0	581	1067	36.74
BPRRCC1105_09G03180	Bathycoccus prasinos	2e-172	550	477	61.01
FC005G10040	Fragilariopsis cylindrus	2e-163	510	821	39.46
VC00G146720	Volvox carteri	5e-160	520	515	55.34
CR03G09710	Chlamydomonas reinhardtii	3e-159	518	522	53.45
pte664940	Paramecium tetraurelia	6e-158	502	916	37.12
pte599340	Paramecium tetraurelia	1e-155	496	909	37.07
emh483710	Emiliania huxleyi	1e-147	474	660	41.67
AA0014G02190	Aureococcus anophagefferens	1e-145	461	672	41.37
HE0000G10040	Helicosporidium sp.	3e-142	442	462	54.11
emh565740	Emiliania huxleyi	4e-141	447	777	39.77
emh375850	Emiliania huxleyi	6e-118	386	533	44.84
CR01G11320	Chlamydomonas reinhardtii	1e-117	406	342	58.77
VC00G13030	Volvox carteri	1e-102	362	404	49.75
SPCC1672.06c	Schizosaccharomyces pombe	2e-99	341	624	36.86
phs223530	Phytophtora sojae	4e-95	330	290	56.90
PTI_11G00860	Phaeodactylum tricornutum	1e-91	325	335	50.15
emh92080	Emiliania huxleyi	7e-89	307	321	48.91
ES0425G00030	Ectocarpus siliculosus	1e-87	313	465	39.35
emh739850	Emiliania huxleyi	5e-85	302	319	48.59
CM09G02100	Cyanidioschyzon merolae	1e-77	263	351	44.16
CM09G02370	Cyanidioschyzon merolae	2e-77	263	318	47.17
gsu105930	Galdieria sulphuraria	8e-76	260	346	41.33
DDB_G0284617	Dictyostelium discoideum	7e-72	252	381	37.53
AP00G16430	Auxenochlorella protothecoides	5e-71	258	362	47.24
ccr179200	Chondrus crispus	2e-47	177	323	37.77
Naga_101571g1	Nannochloropsis gaditana	6e-38	148	149	51.68
OS01G56960	Oryza sativa	9e-24	108	206	34.95
emh07790	Emiliania huxleyi	6e-17	86.3	108	45.37
HE0000G36530	Helicosporidium sp.	1e-13	75.9	146	34.93
FC005G10050	Fragilariopsis cylindrus	8e-13	74.7	100	42.00

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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