Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
MP05G03560	Micromonas pusilla strain CCMP1545	0.0	3267	1597	100.00
MRCC299_04G04580	Micromonas sp RCC299	0.0	1004	694	74.93
ORCC809_06G04200	Ostreococcus sp RCC809	0.0	882	665	66.17
OM_09G03190	Ostreococcus mediterraneus	0.0	881	666	67.87
OL03G03010	Ostreococcus lucimarinus	0.0	852	653	65.70
OT_03G03070	Ostreococcus tauri	0.0	855	762	60.37
PI00G33720	Picochlorum sp. SENEW3 (SE3)	0.0	676	683	54.61
RCC4223.09g01180	Picochlorum_RCC4223	0.0	674	684	54.68
CV00G92490	Coccomyxa subellipsoidea C-169	0.0	666	668	55.09
AC00G52180	Asterochloris sp. Cgr-DA1pho v2.0	0.0	643	655	54.20
CNC64A_005G01870	Chlorella sp NC64A	0.0	641	681	53.16
ATR_00054G00710	Amborella trichopoda	0.0	638	666	51.35
AT5G15070	Arabidopsis thaliana	0.0	634	655	53.13
AT3G01310	Arabidopsis thaliana	0.0	632	661	53.25
OS03G48300	Oryza sativa	0.0	632	660	52.12
PP00070G01260	Physcomitrella patens	0.0	626	655	53.13
PP00112G00240	Physcomitrella patens	0.0	624	658	52.13
OS01G56980	Oryza sativa	0.0	620	664	52.26
CR03G09710	Chlamydomonas reinhardtii	0.0	601	722	48.34
BPRRCC1105_09G03180	Bathycoccus prasinos	1e-176	577	486	63.58
VC00G146720	Volvox carteri	1e-163	544	518	54.44
phs362880	Phytophtora sojae	2e-159	522	702	45.44
FBgn0027279	Drosophila melanogaster	3e-158	534	625	48.96
ENSG00000145725	Homo sapiens	9e-157	518	625	48.48
WBGene00018508	Caenorhabditis elegans	6e-155	514	656	45.88
TP02G08430	Thalassiosira pseudonana	7e-151	492	633	45.02
emh483710	Emiliania huxleyi	2e-148	488	680	42.50
FC005G10040	Fragilariopsis cylindrus	6e-147	479	637	43.33
AA0014G02190	Aureococcus anophagefferens	8e-144	468	691	42.11
HE0000G10040	Helicosporidium sp.	9e-141	449	459	54.47
emh92080	Emiliania huxleyi	3e-124	413	674	39.17
CR01G11320	Chlamydomonas reinhardtii	5e-119	421	339	60.47
emh375850	Emiliania huxleyi	3e-116	390	546	44.69
emh565740	Emiliania huxleyi	3e-116	390	546	44.69
pte599340	Paramecium tetraurelia	5e-112	387	509	44.40
pte664940	Paramecium tetraurelia	6e-111	384	508	44.88
VC00G13030	Volvox carteri	3e-102	369	412	50.00
SPCC1672.06c	Schizosaccharomyces pombe	2e-95	335	633	36.18
PTI_11G00860	Phaeodactylum tricornutum	4e-94	338	342	49.71
phs223530	Phytophtora sojae	3e-92	327	288	56.60
ES0425G00030	Ectocarpus siliculosus	1e-89	325	473	41.44
emh739850	Emiliania huxleyi	4e-89	319	317	49.53
CM09G02100	Cyanidioschyzon merolae	4e-81	277	363	44.35
CM09G02370	Cyanidioschyzon merolae	3e-80	274	322	47.83
gsu105930	Galdieria sulphuraria	4e-79	273	341	42.52
DDB_G0284617	Dictyostelium discoideum	2e-74	263	308	45.45
AP00G16430	Auxenochlorella protothecoides	1e-67	251	370	46.49
ccr179200	Chondrus crispus	2e-45	173	278	39.21
Naga_101571g1	Nannochloropsis gaditana	5e-39	152	116	58.62
HE0000G36530	Helicosporidium sp.	3e-20	97.1	160	39.38
emh07790	Emiliania huxleyi	6e-20	95.9	108	47.22
OS01G56960	Oryza sativa	3e-18	92.4	201	34.33
FC005G10050	Fragilariopsis cylindrus	2e-12	74.3	126	35.71

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment