Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
HE0000G41170	Helicosporidium sp.	0.0	1265	621	100.00
AP00G21430	Auxenochlorella protothecoides	0.0	787	526	73.76
PI00G51280	Picochlorum sp. SENEW3 (SE3)	0.0	728	554	60.65
RCC4223.04g03450	Picochlorum_RCC4223	0.0	725	561	60.43
CNC64A_025G01180	Chlorella sp NC64A	0.0	691	584	62.16
CV00G12800	Coccomyxa subellipsoidea C-169	0.0	650	511	59.88
AC00G27820	Asterochloris sp. Cgr-DA1pho v2.0	0.0	637	522	60.54
CV00G12810	Coccomyxa subellipsoidea C-169	0.0	565	440	63.18
MRCC299_10G04230	Micromonas sp RCC299	2e-159	474	490	50.00
MP16G01280	Micromonas pusilla strain CCMP1545	8e-154	459	452	50.88
OM_17G00960	Ostreococcus mediterraneus	1e-146	444	503	46.52
OL16G00900	Ostreococcus lucimarinus	2e-145	439	482	46.47
BPRRCC1105_06G01240	Bathycoccus prasinos	4e-143	437	432	48.84
OT_17G00830	Ostreococcus tauri	3e-138	421	501	45.31
ORCC809_16G01780	Ostreococcus sp RCC809	5e-132	405	490	43.27
PP00065G00990	Physcomitrella patens	4e-118	369	503	38.77
AT1G23480	Arabidopsis thaliana	1e-116	365	496	38.71
PP00036G01070	Physcomitrella patens	2e-116	365	499	38.28
AT1G24070	Arabidopsis thaliana	2e-116	365	500	37.60
PP00162G00740	Physcomitrella patens	2e-116	369	444	41.44
PP00036G00370	Physcomitrella patens	5e-116	363	503	38.57
OS02G09930	Oryza sativa	5e-116	363	442	42.53
AT5G22740	Arabidopsis thaliana	1e-115	363	496	39.11
PP00019G01110	Physcomitrella patens	1e-115	367	444	40.77
ATR_00040G02570	Amborella trichopoda	2e-115	362	501	38.92
PP00373G00150	Physcomitrella patens	2e-115	367	444	40.99
AT5G03760	Arabidopsis thaliana	9e-115	360	495	39.19
AT3G07330	Arabidopsis thaliana	3e-114	363	527	36.81
PP00015G00680	Physcomitrella patens	5e-114	363	443	41.76
PP00224G00220	Physcomitrella patens	7e-114	363	542	37.45
OS08G15420	Oryza sativa	3e-113	362	432	42.36
PP00089G01080	Physcomitrella patens	6e-112	358	470	38.72
PP00164G00010	Physcomitrella patens	7e-112	357	446	41.48
OS09G25900	Oryza sativa	3e-111	356	447	40.49
AT4G31590	Arabidopsis thaliana	4e-111	355	433	40.88
AT2G24630	Arabidopsis thaliana	6e-111	355	433	39.95
OS07G03260	Oryza sativa	7e-111	355	443	41.76
AT3G28180	Arabidopsis thaliana	9e-111	354	433	40.18
AT5G16190	Arabidopsis thaliana	2e-109	343	434	40.09
AT2G35650	Arabidopsis thaliana	4e-109	346	426	42.49
OS06G42020	Oryza sativa	2e-108	343	433	41.57
OS03G56060	Oryza sativa	3e-108	340	363	43.80
ATR_00065G00270	Amborella trichopoda	5e-108	348	434	40.32
ATR_00019G01680	Amborella trichopoda	6e-108	347	435	40.46
OS08G33740	Oryza sativa	1e-107	343	474	38.19
AT4G13410	Arabidopsis thaliana	1e-107	342	503	36.38
OS03G07350	Oryza sativa	8e-107	340	437	39.82
AT4G07960	Arabidopsis thaliana	1e-105	341	455	39.78
OS01G56130	Oryza sativa	2e-105	340	528	37.88
OS05G43530	Oryza sativa	2e-104	338	523	37.67
ATR_00013G02120	Amborella trichopoda	3e-103	334	446	40.58
AT3G56000	Arabidopsis thaliana	6e-103	329	499	35.27
OS03G26044	Oryza sativa	8e-102	328	441	39.91
AT4G16590	Arabidopsis thaliana	4e-101	320	394	40.86
OS07G43710	Oryza sativa	4e-100	323	438	37.67
OS10G26630	Oryza sativa	4e-99	319	438	39.04
OS02G51060	Oryza sativa	2e-97	315	433	38.80
VC00G68920	Volvox carteri	2e-94	308	375	44.80
OS06G12460	Oryza sativa	5e-94	308	503	36.38
CR06G04470	Chlamydomonas reinhardtii	7e-93	306	420	41.43
ATR_00072G01360	Amborella trichopoda	6e-89	286	294	45.58
emh181270	Emiliania huxleyi	2e-53	191	282	42.55
emh488170	Emiliania huxleyi	2e-53	191	282	42.55
OS09G26770	Oryza sativa	4e-50	186	315	33.97
OM_13G00450	Ostreococcus mediterraneus	7e-27	120	244	31.56
OL20G02910	Ostreococcus lucimarinus	7e-26	117	244	31.97
ORCC809_20G02860	Ostreococcus sp RCC809	4e-25	114	244	30.33
OT_14G02980	Ostreococcus tauri	6e-23	107	249	32.93
ES0200G00060	Ectocarpus siliculosus	1e-11	72.0	375	23.73
ES0097G00300	Ectocarpus siliculosus	1e-11	72.0	304	26.64
ES0097G00210	Ectocarpus siliculosus	1e-11	72.0	275	24.73
AC00G21830	Asterochloris sp. Cgr-DA1pho v2.0	3e-10	67.4	316	25.63
PP00372G00370	Physcomitrella patens	6e-10	66.2	273	24.91
emh647580	Emiliania huxleyi	7e-10	66.2	312	22.12
ES0185G00090	Ectocarpus siliculosus	1e-09	65.5	284	23.94
ccr13740	Chondrus crispus	2e-09	64.3	292	22.60
AC00G66050	Asterochloris sp. Cgr-DA1pho v2.0	5e-09	63.2	217	26.27
PI00G60790	Picochlorum sp. SENEW3 (SE3)	1e-08	62.4	274	22.99
PI00G46760	Picochlorum sp. SENEW3 (SE3)	2e-08	62.0	307	23.78
DDB_G0269124	Dictyostelium discoideum	4e-08	60.8	172	23.26
ES0097G00120	Ectocarpus siliculosus	4e-08	60.1	201	27.36
RCC4223.10g01020	Picochlorum_RCC4223	1e-07	58.9	239	26.36
CV00G40830	Coccomyxa subellipsoidea C-169	2e-07	58.2	333	24.32
AC00G29940	Asterochloris sp. Cgr-DA1pho v2.0	5e-07	57.4	216	25.00
CV00G83580	Coccomyxa subellipsoidea C-169	9e-07	56.2	216	25.93
AP00G07320	Auxenochlorella protothecoides	3e-06	54.7	259	25.48
Naga_100049g27	Nannochloropsis gaditana	5e-06	53.9	259	22.78
AC00G02440	Asterochloris sp. Cgr-DA1pho v2.0	8e-06	53.1	223	22.42

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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