Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ENSMUSG00000025423	Mus musculus	0.0	1261	622	100.00
ENSG00000078043	Homo sapiens	0.0	1243	622	98.07
ENSMUSG00000032405	Mus musculus	0.0	627	673	54.53
ENSG00000131788	Homo sapiens	0.0	618	583	59.01
FBgn0003612	Drosophila melanogaster	2e-114	362	448	44.42
WBGene00001574	Caenorhabditis elegans	2e-45	176	343	33.82
SPAC1687.05	Schizosaccharomyces pombe	1e-26	119	297	28.28
YOR156C	Saccharomyces cerevisiae strain S288C	6e-22	104	287	25.78
YDR409W	Saccharomyces cerevisiae strain S288C	1e-18	94.4	140	32.14
PP00215G00310	Physcomitrella patens	8e-18	91.7	97	39.18
Naga_100014g29	Nannochloropsis gaditana	8e-18	91.3	310	27.10
ENSG00000122515	Homo sapiens	5e-17	89.4	159	35.22
ENSMUSG00000041164	Mus musculus	8e-17	88.6	349	28.08
ATR_00053G01700	Amborella trichopoda	1e-16	88.2	151	31.13
AT5G41580	Arabidopsis thaliana	2e-16	87.0	285	23.51
PP00062G00250	Physcomitrella patens	7e-16	85.5	116	34.48
ccr87260	Chondrus crispus	1e-15	84.7	171	29.24
ENSMUSG00000007817	Mus musculus	1e-15	84.7	152	32.89
ENSG00000108175	Homo sapiens	1e-15	84.7	152	32.89
OS05G03430	Oryza sativa	2e-15	84.0	474	25.53
PP00016G01980	Physcomitrella patens	3e-15	83.6	120	35.00
ATR_00108G00140	Amborella trichopoda	4e-15	83.2	478	23.22
AT5G60410	Arabidopsis thaliana	6e-15	82.4	464	25.00
FBgn0026160	Drosophila melanogaster	9e-15	82.0	145	32.41
OS06G06870	Oryza sativa	1e-14	81.3	157	33.12
OS03G50980	Oryza sativa	2e-14	80.9	230	27.39
PP00094G00120	Physcomitrella patens	3e-13	77.0	496	22.58
PP00010G01740	Physcomitrella patens	5e-13	76.3	226	25.22
ES0060G00170	Ectocarpus siliculosus	6e-12	72.8	123	30.08
emh239750	Emiliania huxleyi	1e-11	68.6	97	35.05
pte165890	Paramecium tetraurelia	2e-11	70.9	229	26.20
DDB_G0274743	Dictyostelium discoideum	3e-11	70.9	313	25.24
VC00G100070	Volvox carteri	6e-11	69.3	185	27.57
pte498400	Paramecium tetraurelia	1e-10	68.2	229	25.76
pte382460	Paramecium tetraurelia	2e-09	64.7	94	32.98
CM07G00630	Cyanidioschyzon merolae	2e-09	65.1	187	29.41
pte475560	Paramecium tetraurelia	7e-09	63.2	145	26.90
pte113990	Paramecium tetraurelia	3e-08	60.8	302	23.84
OM_07G02520	Ostreococcus mediterraneus	5e-08	60.5	125	29.60
OL12G02570	Ostreococcus lucimarinus	5e-08	59.7	118	31.36
OT_12G02490	Ostreococcus tauri	6e-08	60.1	96	32.29
MP01G01650	Micromonas pusilla strain CCMP1545	7e-08	59.7	92	29.35
phs65970	Phytophtora sojae	9e-08	58.9	213	25.35
CR12G05450	Chlamydomonas reinhardtii	2e-07	58.5	109	28.44
OS07G25890	Oryza sativa	1e-06	52.8	72	29.17
DDB_G0280603	Dictyostelium discoideum	1e-06	55.8	68	35.29
pte75310	Paramecium tetraurelia	1e-06	55.5	80	32.50
pte155660	Paramecium tetraurelia	2e-06	55.1	127	29.13
pte15250	Paramecium tetraurelia	2e-06	54.7	74	32.43
AC00G42150	Asterochloris sp. Cgr-DA1pho v2.0	3e-06	54.7	113	28.32
DDB_G0280707	Dictyostelium discoideum	3e-06	51.6	57	38.60
AT1G08910	Arabidopsis thaliana	6e-06	53.5	94	29.79
ORCC809_12G02980	Ostreococcus sp RCC809	6e-06	52.8	100	31.00
pte789870	Paramecium tetraurelia	7e-06	53.1	96	33.33

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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