Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ENSG00000127511	Homo sapiens	0.0	2416	1163	100.00
ENSMUSG00000031622	Mus musculus	0.0	2030	1142	87.92
ENSMUSG00000042557	Mus musculus	0.0	1048	1023	53.76
ENSG00000169375	Homo sapiens	0.0	1038	1021	53.48
FBgn0022764	Drosophila melanogaster	2e-124	427	490	49.39
RCC4223.04g02910	Picochlorum_RCC4223	1e-101	353	1128	26.42
AC00G27900	Asterochloris sp. Cgr-DA1pho v2.0	9e-100	342	971	28.73
PI00G68970	Picochlorum sp. SENEW3 (SE3)	5e-99	345	1128	26.24
MP02G03020	Micromonas pusilla strain CCMP1545	3e-97	340	768	32.55
OT_01G04000	Ostreococcus tauri	4e-97	339	1115	27.35
OM_01G02760	Ostreococcus mediterraneus	2e-95	334	688	32.70
CV00G13480	Coccomyxa subellipsoidea C-169	6e-95	333	680	33.53
MRCC299_01G02440	Micromonas sp RCC299	1e-94	335	670	34.33
PTI_29G00720	Phaeodactylum tricornutum	7e-88	316	692	33.82
MRCC299_01G02450	Micromonas sp RCC299	1e-85	306	638	33.86
VC00G147530	Volvox carteri	3e-85	306	726	30.99
AT1G24190	Arabidopsis thaliana	3e-82	298	786	30.41
CR03G08780	Chlamydomonas reinhardtii	1e-81	295	664	31.02
AT5G15020	Arabidopsis thaliana	2e-81	296	770	29.87
AA0039G00150	Aureococcus anophagefferens	3e-79	285	719	32.27
emh754380	Emiliania huxleyi	6e-74	271	897	26.64
DDB_G0281045	Dictyostelium discoideum	2e-71	266	400	37.50
OS05G01020	Oryza sativa	4e-71	264	742	29.51
AT1G59890	Arabidopsis thaliana	3e-69	257	674	31.45
FC015G01010	Fragilariopsis cylindrus	2e-68	254	521	33.78
gsu57580	Galdieria sulphuraria	3e-67	252	511	35.23
FC008G06010	Fragilariopsis cylindrus	9e-67	239	610	31.31
BPRRCC1105_01G03950	Bathycoccus prasinos	8e-66	248	531	32.96
SPBC12C2.10c	Schizosaccharomyces pombe	9e-66	248	584	29.97
CM17G01250	Cyanidioschyzon merolae	2e-64	244	532	31.02
ORCC809_01G02570	Ostreococcus sp RCC809	3e-61	231	837	25.33
YOL004W	Saccharomyces cerevisiae strain S288C	3e-60	231	401	34.41
phs105200	Phytophtora sojae	2e-54	213	352	34.94
OL01G04190	Ostreococcus lucimarinus	3e-54	210	436	31.88
SPAC23C11.15	Schizosaccharomyces pombe	5e-51	200	639	26.76
SPBC1734.16c	Schizosaccharomyces pombe	2e-50	199	662	27.95
ccr107580	Chondrus crispus	6e-49	194	495	29.49
OS01G01960	Oryza sativa	9e-49	194	422	32.70
AT3G01320	Arabidopsis thaliana	1e-48	193	416	31.73
AT1G70060	Arabidopsis thaliana	4e-45	182	493	29.21
ATR_00090G01090	Amborella trichopoda	5e-45	182	404	32.18
TP07G04750	Thalassiosira pseudonana	1e-44	181	459	28.98
TP03G03670	Thalassiosira pseudonana	2e-44	164	196	48.98
PP00122G00540	Physcomitrella patens	2e-43	176	428	29.91
PP00101G00880	Physcomitrella patens	4e-42	172	407	31.45
ES0055G00610	Ectocarpus siliculosus	1e-39	164	373	31.90
PP00212G00120	Physcomitrella patens	7e-38	158	322	32.30
AT1G10450	Arabidopsis thaliana	1e-37	157	316	33.23
PP00363G00060	Physcomitrella patens	3e-37	157	362	30.66
PP00403G00290	Physcomitrella patens	2e-36	154	289	34.26
ES0042G00150	Ectocarpus siliculosus	2e-36	154	335	31.94
PP00178G00670	Physcomitrella patens	9e-36	151	290	33.79
WBGene00004117	Caenorhabditis elegans	4e-33	143	504	27.18
CNC64A_032G00370	Chlorella sp NC64A	1e-30	125	178	41.01
PP00178G00660	Physcomitrella patens	1e-30	128	255	36.47
HE0000G60260	Helicosporidium sp.	3e-30	124	184	42.93
AA0022G00930	Aureococcus anophagefferens	3e-26	118	287	32.06
AA0018G00030	Aureococcus anophagefferens	3e-25	106	73	69.86
AP00G33310	Auxenochlorella protothecoides	5e-25	108	169	40.83
AT1G24200	Arabidopsis thaliana	4e-23	104	248	31.85
AT1G70030	Arabidopsis thaliana	4e-23	103	194	34.54
Naga_100390g3	Nannochloropsis gaditana	1e-22	109	331	27.79
AA0022G00920	Aureococcus anophagefferens	2e-22	98.6	65	69.23
PTI_10G03700	Phaeodactylum tricornutum	5e-22	107	78	62.82
ccr54500	Chondrus crispus	2e-18	95.9	112	51.79
ccr11660	Chondrus crispus	4e-18	89.7	72	61.11
ATR_00036G01080	Amborella trichopoda	1e-17	86.3	121	47.11
pte189960	Paramecium tetraurelia	4e-17	91.3	342	24.56
pte597540	Paramecium tetraurelia	3e-16	88.2	337	23.74
pte717650	Paramecium tetraurelia	6e-16	87.4	337	23.44
AA0018G00020	Aureococcus anophagefferens	1e-15	79.0	79	53.16
MP03G06980	Micromonas pusilla strain CCMP1545	6e-15	83.2	188	29.79
OS05G51110	Oryza sativa	8e-15	83.6	314	24.52
pte266810	Paramecium tetraurelia	1e-14	82.8	188	29.26
pte313360	Paramecium tetraurelia	1e-14	82.8	176	29.55
MRCC299_05G02560	Micromonas sp RCC299	4e-13	77.8	186	30.11
BPRRCC1105_03G02470	Bathycoccus prasinos	6e-12	73.6	202	26.73
AT1G24230	Arabidopsis thaliana	1e-11	70.1	228	26.75
OT_05G01970	Ostreococcus tauri	8e-11	70.1	204	28.43
emh682350	Emiliania huxleyi	9e-11	66.2	41	73.17
AT1G27250	Arabidopsis thaliana	1e-10	66.2	64	46.88
AT1G27220	Arabidopsis thaliana	1e-10	66.6	65	49.23
OM_03G02080	Ostreococcus mediterraneus	1e-10	69.3	206	27.18
emh571180	Emiliania huxleyi	1e-10	67.8	79	44.30
AT1G27260	Arabidopsis thaliana	5e-10	64.7	211	26.07
AT4G12020	Arabidopsis thaliana	9e-10	67.4	74	45.95
AT5G15030	Arabidopsis thaliana	9e-10	65.5	78	44.87
FC014G03320	Fragilariopsis cylindrus	2e-09	66.2	64	50.00
emh95250	Emiliania huxleyi	6e-09	63.5	122	33.61
Naga_100500g4	Nannochloropsis gaditana	7e-09	60.8	81	43.21
OS08G25200	Oryza sativa	2e-08	58.9	66	40.91
AT1G10250	Arabidopsis thaliana	2e-08	58.2	69	42.03
AT5G35610	Arabidopsis thaliana	2e-08	59.3	150	29.33
Naga_102439g1	Nannochloropsis gaditana	2e-08	58.2	48	52.08
OL05G01930	Ostreococcus lucimarinus	3e-08	61.6	150	28.00
AT1G27280	Arabidopsis thaliana	4e-08	58.9	159	28.93
AT1G23810	Arabidopsis thaliana	1e-07	57.8	225	24.89
AT1G24250	Arabidopsis thaliana	3e-07	57.0	215	25.58
AT1G27240	Arabidopsis thaliana	2e-06	53.1	197	25.89
TP06G03150	Thalassiosira pseudonana	6e-06	55.1	65	38.46

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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