Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ENSG00000121774	Homo sapiens	0.0	890	444	100.00
ENSMUSG00000028790	Mus musculus	0.0	731	444	94.37
ENSG00000112232	Homo sapiens	6e-130	386	354	62.15
ENSMUSG00000026058	Mus musculus	5e-128	382	354	62.15
ENSG00000131773	Homo sapiens	2e-120	362	359	57.94
ENSMUSG00000022332	Mus musculus	3e-119	359	360	56.94
FBgn0022986	Drosophila melanogaster	2e-48	176	174	48.85
FBgn0022985	Drosophila melanogaster	1e-46	172	170	45.88
FBgn0034739	Drosophila melanogaster	3e-43	159	178	43.26
FBgn0022984	Drosophila melanogaster	4e-43	160	174	43.10
FBgn0034740	Drosophila melanogaster	3e-42	157	174	41.95
FBgn0034731	Drosophila melanogaster	3e-38	149	114	59.65
FBgn0034659	Drosophila melanogaster	5e-37	143	174	41.38
ENSG00000112531	Homo sapiens	3e-32	130	198	41.41
ENSMUSG00000062078	Mus musculus	3e-32	130	198	41.41
WBGene00001595	Caenorhabditis elegans	7e-30	124	228	34.65
WBGene00006423	Caenorhabditis elegans	9e-30	124	240	37.92
FBgn0264491	Drosophila melanogaster	2e-29	123	204	36.76
PP00068G01370	Physcomitrella patens	3e-22	99.8	125	40.00
PP00269G00230	Physcomitrella patens	4e-22	99.4	219	30.59
AT2G38610	Arabidopsis thaliana	4e-22	99.4	119	42.86
OS03G60110	Oryza sativa	2e-21	97.4	119	42.86
AT5G56140	Arabidopsis thaliana	1e-20	95.9	250	31.60
PP00226G00150	Physcomitrella patens	2e-20	94.7	239	29.71
AT3G08620	Arabidopsis thaliana	3e-20	94.4	120	40.83
CM01G00750	Cyanidioschyzon merolae	3e-20	97.4	133	42.86
ATR_00077G01490	Amborella trichopoda	3e-20	94.0	121	39.67
AT1G09660	Arabidopsis thaliana	5e-20	93.6	121	41.32
AT4G26480	Arabidopsis thaliana	1e-19	92.8	280	30.00
OS07G12490	Oryza sativa	1e-19	92.4	119	42.02
ATR_00061G00740	Amborella trichopoda	1e-19	92.4	240	29.17
ATR_00071G01990	Amborella trichopoda	2e-19	92.4	120	40.00
WBGene00022101	Caenorhabditis elegans	2e-19	93.6	149	34.90
OS02G49080	Oryza sativa	3e-19	91.7	242	28.51
OS05G40290	Oryza sativa	7e-19	90.1	119	40.34
OS01G66300	Oryza sativa	9e-19	90.1	120	38.33
OS05G34670	Oryza sativa	2e-18	89.4	120	38.33
gsu12660	Galdieria sulphuraria	2e-18	91.3	203	31.03
OS01G60260	Oryza sativa	4e-18	88.2	119	38.66
AT5G51300	Arabidopsis thaliana	6e-17	87.4	125	37.60
WBGene00019509	Caenorhabditis elegans	6e-17	84.3	134	37.31
phs321740	Phytophtora sojae	9e-17	86.7	125	37.60
ATR_00078G01350	Amborella trichopoda	2e-16	85.9	125	38.40
PP00087G00430	Physcomitrella patens	1e-15	83.6	131	38.17
PP00138G00850	Physcomitrella patens	2e-15	83.2	131	38.17
Naga_100170g9	Nannochloropsis gaditana	3e-15	82.0	255	30.59
SPCC962.06c	Schizosaccharomyces pombe	8e-14	77.4	129	30.23
PP00009G00770	Physcomitrella patens	2e-13	75.9	119	33.61
DDB_G0293554	Dictyostelium discoideum	3e-13	75.9	129	34.11
PI00G03500	Picochlorum sp. SENEW3 (SE3)	4e-13	75.5	131	34.35
AC00G25480	Asterochloris sp. Cgr-DA1pho v2.0	5e-13	70.1	78	46.15
ES0040G00330	Ectocarpus siliculosus	6e-13	75.1	121	36.36
FBgn0025571	Drosophila melanogaster	1e-12	74.3	126	38.10
ATR_00009G03460	Amborella trichopoda	1e-12	73.9	124	37.10
WBGene00013325	Caenorhabditis elegans	2e-12	72.0	201	27.86
RCC4223.05g04830	Picochlorum_RCC4223	3e-12	72.8	125	35.20
phs243720	Phytophtora sojae	5e-12	72.0	129	34.88
WBGene00013808	Caenorhabditis elegans	6e-12	71.6	133	35.34
MRCC299_12G04820	Micromonas sp RCC299	7e-12	71.6	140	34.29
CV00G10270	Coccomyxa subellipsoidea C-169	8e-12	67.0	74	47.30
ccr173500	Chondrus crispus	1e-11	70.5	128	32.03
CR09G00260	Chlamydomonas reinhardtii	1e-11	70.9	126	34.92
YLR116W	Saccharomyces cerevisiae strain S288C	1e-11	70.1	127	31.50
MP10G00190	Micromonas pusilla strain CCMP1545	2e-11	70.1	123	36.59
gsu82300	Galdieria sulphuraria	4e-11	68.2	128	32.03
CNC64A_026G00860	Chlorella sp NC64A	4e-11	68.9	75	44.00
BPRRCC1105_18G01380	Bathycoccus prasinos	7e-11	68.2	143	35.66
ENSG00000168066	Homo sapiens	7e-11	68.2	131	29.77
CR12G14200	Chlamydomonas reinhardtii	1e-10	68.2	125	32.00
PTI_12G03380	Phaeodactylum tricornutum	1e-10	67.4	131	32.82
BPRRCC1105_16G00170	Bathycoccus prasinos	1e-10	67.4	122	34.43
MRCC299_11G03120	Micromonas sp RCC299	3e-10	62.4	124	33.06
AP00G37080	Auxenochlorella protothecoides	5e-10	65.9	119	34.45
ES0159G00160	Ectocarpus siliculosus	6e-10	65.5	120	31.67
OT_12G00040	Ostreococcus tauri	7e-10	65.1	125	34.40
ORCC809_08G03630	Ostreococcus sp RCC809	8e-10	64.7	129	34.88
VC00G45400	Volvox carteri	1e-09	65.1	123	34.15
MP08G03030	Micromonas pusilla strain CCMP1545	2e-09	63.5	149	30.20
OM_07G00110	Ostreococcus mediterraneus	3e-09	63.2	120	34.17
MP05G01000	Micromonas pusilla strain CCMP1545	9e-09	61.6	129	33.33
AA0009G02850	Aureococcus anophagefferens	1e-08	57.8	120	32.50
ATR_00024G01380	Amborella trichopoda	2e-08	60.8	105	35.24
WBGene00044674	Caenorhabditis elegans	4e-08	58.2	120	28.33
ORCC809_11G01120	Ostreococcus sp RCC809	5e-08	58.9	126	36.51
OM_11G00290	Ostreococcus mediterraneus	6e-08	58.9	127	33.86
FC007G03570	Fragilariopsis cylindrus	6e-08	55.8	54	42.59
TP05G01980	Thalassiosira pseudonana	7e-08	58.9	277	27.08
OT_11G00280	Ostreococcus tauri	1e-07	58.2	124	33.87
MRCC299_06G06020	Micromonas sp RCC299	1e-07	57.8	128	34.38
OL12G00030	Ostreococcus lucimarinus	2e-07	54.3	44	52.27
OL11G00260	Ostreococcus lucimarinus	2e-07	53.9	46	47.83
Naga_100152g10	Nannochloropsis gaditana	4e-07	56.2	99	39.39
WBGene00010046	Caenorhabditis elegans	1e-06	53.9	110	28.18
AT3G32940	Arabidopsis thaliana	6e-06	52.8	79	36.71

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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