Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ENSG00000047315	Homo sapiens	0.0	2454	1175	100.00
ENSMUSG00000029250	Mus musculus	0.0	2453	1175	99.91
FBgn0262955	Drosophila melanogaster	0.0	2146	1173	86.10
WBGene00016140	Caenorhabditis elegans	0.0	2005	1181	78.32
ATR_00068G01380	Amborella trichopoda	0.0	1640	1179	67.18
PP00084G01210	Physcomitrella patens	0.0	1619	1162	67.64
DDB_G0288257	Dictyostelium discoideum	0.0	1609	1179	66.07
AT4G21710	Arabidopsis thaliana	0.0	1608	1184	66.72
OT_01G01700	Ostreococcus tauri	0.0	1586	1194	64.41
OL01G01770	Ostreococcus lucimarinus	0.0	1579	1184	64.61
OM_01G05360	Ostreococcus mediterraneus	0.0	1574	1191	64.06
ORCC809_01G04890	Ostreococcus sp RCC809	0.0	1572	1191	64.32
MRCC299_03G04130	Micromonas sp RCC299	0.0	1565	1176	63.27
MP02G04900	Micromonas pusilla strain CCMP1545	0.0	1548	1170	63.16
phs123170	Phytophtora sojae	0.0	1545	1162	64.20
CV00G95650	Coccomyxa subellipsoidea C-169	0.0	1542	1184	63.18
CNC64A_024G01420	Chlorella sp NC64A	0.0	1530	1182	62.01
SPAC23G3.01	Schizosaccharomyces pombe	0.0	1523	1217	60.15
RCC4223.16g01000	Picochlorum_RCC4223	0.0	1501	1163	62.17
PI00G44940	Picochlorum sp. SENEW3 (SE3)	0.0	1497	1163	61.99
AC00G13000	Asterochloris sp. Cgr-DA1pho v2.0	0.0	1477	1161	61.67
ES0115G00410	Ectocarpus siliculosus	0.0	1475	1185	60.17
TP06G01580	Thalassiosira pseudonana	0.0	1464	1200	59.33
gsu36050	Galdieria sulphuraria	0.0	1463	1199	59.80
YOR151C	Saccharomyces cerevisiae strain S288C	0.0	1449	1224	58.09
AA0026G00040	Aureococcus anophagefferens	0.0	1446	1125	61.69
FC028G00300	Fragilariopsis cylindrus	0.0	1446	1186	59.95
HE0000G47580	Helicosporidium sp.	0.0	1443	1190	60.25
PTI_05G00360	Phaeodactylum tricornutum	0.0	1442	1210	59.26
AP00G09650	Auxenochlorella protothecoides	0.0	1422	1189	58.87
VC00G24320	Volvox carteri	0.0	1404	1214	58.15
Naga_100071g5	Nannochloropsis gaditana	0.0	1383	1171	57.90
AA0020G00770	Aureococcus anophagefferens	0.0	1376	1074	61.64
CR02G00500	Chlamydomonas reinhardtii	0.0	1318	1110	59.01
CM08G01170	Cyanidioschyzon merolae	0.0	1308	1174	55.03
ccr188200	Chondrus crispus	0.0	1297	1140	56.58
emh299710	Emiliania huxleyi	0.0	1147	914	62.58
pte466290	Paramecium tetraurelia	0.0	942	1215	42.30
pte586220	Paramecium tetraurelia	0.0	936	1202	43.09
PP00013G01660	Physcomitrella patens	0.0	807	1190	39.08
ENSG00000013503	Homo sapiens	0.0	793	1165	38.54
ENSMUSG00000034453	Mus musculus	0.0	789	1165	38.45
gsu41020	Galdieria sulphuraria	0.0	788	1159	38.40
OL01G06240	Ostreococcus lucimarinus	0.0	786	1187	37.32
OM_01G00640	Ostreococcus mediterraneus	0.0	785	1173	37.51
Naga_100003g143	Nannochloropsis gaditana	0.0	773	1218	37.27
FBgn0004463	Drosophila melanogaster	0.0	770	1160	36.90
OT_01G06160	Ostreococcus tauri	0.0	769	1178	36.84
PP00019G01420	Physcomitrella patens	0.0	767	1180	36.61
SPAC4G9.08c	Schizosaccharomyces pombe	0.0	763	1166	36.79
WBGene00017300	Caenorhabditis elegans	0.0	763	1178	36.76
FC023G01460	Fragilariopsis cylindrus	0.0	763	1188	37.12
MP13G01230	Micromonas pusilla strain CCMP1545	0.0	758	1168	37.41
TP01G04670	Thalassiosira pseudonana	0.0	754	1159	37.10
ORCC809_01G00570	Ostreococcus sp RCC809	0.0	789	1166	37.65
YOR207C	Saccharomyces cerevisiae strain S288C	0.0	753	1163	37.06
MRCC299_10G01920	Micromonas sp RCC299	0.0	753	1170	37.78
AT5G45140	Arabidopsis thaliana	0.0	749	1170	36.15
PTI_05G00020	Phaeodactylum tricornutum	0.0	751	1186	36.68
CV00G77900	Coccomyxa subellipsoidea C-169	0.0	746	1183	36.86
AC00G33420	Asterochloris sp. Cgr-DA1pho v2.0	0.0	745	1182	37.23
phs209180	Phytophtora sojae	0.0	739	1184	36.15
ccr156300	Chondrus crispus	0.0	738	1182	35.96
PI00G10550	Picochlorum sp. SENEW3 (SE3)	0.0	727	1176	37.24
RCC4223.02g09760	Picochlorum_RCC4223	0.0	727	1176	37.33
PP00248G00160	Physcomitrella patens	0.0	726	1176	37.33
CNC64A_023G00780	Chlorella sp NC64A	0.0	723	1199	36.53
CR12G16700	Chlamydomonas reinhardtii	0.0	714	1208	35.26
AA0051G00320	Aureococcus anophagefferens	0.0	712	1197	34.75
CM05G01010	Cyanidioschyzon merolae	0.0	699	1303	33.15
emh585970	Emiliania huxleyi	0.0	671	1195	34.39
pte510940	Paramecium tetraurelia	0.0	667	1170	35.56
emh164130	Emiliania huxleyi	0.0	668	1214	34.35
emh509620	Emiliania huxleyi	0.0	645	478	65.48
ATR_00010G03420	Amborella trichopoda	0.0	652	1251	34.37
BPRRCC1105_15G02200	Bathycoccus prasinos	0.0	653	892	40.47
VC00G42770	Volvox carteri	0.0	628	1139	34.24
OS04G54840	Oryza sativa	0.0	620	1231	33.63
AT3G23780	Arabidopsis thaliana	0.0	610	1202	33.94
AT3G18090	Arabidopsis thaliana	0.0	580	1098	34.97
OS08G07480	Oryza sativa	0.0	578	1187	32.35
OS03G44484	Oryza sativa	1e-170	521	354	68.93
DDB_G0288449	Dictyostelium discoideum	6e-148	491	668	39.52
AA0053G00310	Aureococcus anophagefferens	2e-138	449	918	31.59
phs356280	Phytophtora sojae	1e-132	441	1197	29.99
AP00G48690	Auxenochlorella protothecoides	4e-132	437	577	40.55
WBGene00008781	Caenorhabditis elegans	2e-129	431	1205	29.21
BPRRCC1105_14G03380	Bathycoccus prasinos	2e-126	423	1223	29.03
DDB_G0293560	Dictyostelium discoideum	2e-125	420	1211	28.74
OM_04G01990	Ostreococcus mediterraneus	8e-125	418	1186	28.50
ccr92540	Chondrus crispus	5e-120	407	1244	29.58
SPBP23A10.07	Schizosaccharomyces pombe	8e-120	405	1161	29.11
FC006G05540	Fragilariopsis cylindrus	1e-119	406	1250	29.04
PI00G03350	Picochlorum sp. SENEW3 (SE3)	3e-117	399	1214	28.42
ENSG00000125630	Homo sapiens	3e-117	398	1188	28.62
ATR_00068G01350	Amborella trichopoda	9e-117	374	366	53.55
gsu140890	Galdieria sulphuraria	1e-116	397	1194	28.89
PP00169G00670	Physcomitrella patens	3e-116	396	1229	28.07
YPR010C	Saccharomyces cerevisiae strain S288C	8e-116	395	1121	29.97
RCC4223.04g06570	Picochlorum_RCC4223	6e-115	392	1229	28.32
pte133420	Paramecium tetraurelia	2e-114	390	1179	27.99
pte346420	Paramecium tetraurelia	4e-113	386	1179	28.16
gsu140910	Galdieria sulphuraria	8e-113	387	1205	28.55
ORCC809_02G01830	Ostreococcus sp RCC809	2e-111	380	1124	28.29
TP12G01380	Thalassiosira pseudonana	7e-111	379	1136	29.93
OL02G02870	Ostreococcus lucimarinus	2e-110	377	1135	29.69
AC00G67380	Asterochloris sp. Cgr-DA1pho v2.0	2e-110	379	1202	28.12
MP02G06310	Micromonas pusilla strain CCMP1545	1e-108	375	1251	27.90
FBgn0003278	Drosophila melanogaster	3e-108	372	1192	27.68
OT_02G02050	Ostreococcus tauri	4e-108	373	1209	28.78
ES0395G00110	Ectocarpus siliculosus	6e-108	353	451	40.80
MRCC299_01G03030	Micromonas sp RCC299	2e-107	371	1234	27.39
AT1G29940	Arabidopsis thaliana	5e-107	370	1150	27.74
OL02G02860	Ostreococcus lucimarinus	8e-106	366	1212	28.88
ATR_00020G01180	Amborella trichopoda	9e-103	344	481	37.84
HE0000G30250	Helicosporidium sp.	2e-102	357	1222	28.40
OS10G35290	Oryza sativa	9e-101	349	756	32.80
OS03G28960	Oryza sativa	6e-100	342	470	39.36
ATR_00186G00130	Amborella trichopoda	6e-98	332	528	37.31
CM19G01140	Cyanidioschyzon merolae	3e-97	342	1240	27.18
PP00029G00770	Physcomitrella patens	4e-97	330	576	35.76
Naga_100052g16	Nannochloropsis gaditana	3e-96	340	556	37.23
emh162240	Emiliania huxleyi	3e-92	328	1262	27.34
emh508710	Emiliania huxleyi	3e-92	328	1246	27.61
PP00541G00020	Physcomitrella patens	6e-92	314	689	32.80
MRCC299_01G03040	Micromonas sp RCC299	8e-91	320	993	27.90
AA0038G00180	Aureococcus anophagefferens	9e-90	320	1246	27.37
PTI_01G08590	Phaeodactylum tricornutum	1e-89	320	552	35.69
PP00120G00250	Physcomitrella patens	2e-88	308	808	29.70
PP00011G01780	Physcomitrella patens	1e-86	296	576	34.20
BPRRCC1105_01G01590	Bathycoccus prasinos	4e-86	288	308	53.90
ATR_00020G01150	Amborella trichopoda	4e-84	283	333	43.84
emh239810	Emiliania huxleyi	1e-83	280	268	50.75
PP00129G00480	Physcomitrella patens	5e-83	283	482	36.10
CV00G70810	Coccomyxa subellipsoidea C-169	4e-75	268	761	29.43
VC00G59030	Volvox carteri	4e-72	265	866	28.64
ATR_00068G01370	Amborella trichopoda	6e-71	239	168	62.50
gsu03000	Galdieria sulphuraria	1e-67	235	240	51.67
PP00013G02450	Physcomitrella patens	2e-60	216	336	38.39
PP00015G02010	Physcomitrella patens	2e-59	213	336	38.10
ATR_00068G01360	Amborella trichopoda	1e-53	193	228	48.25
CR07G02200	Chlamydomonas reinhardtii	1e-53	208	278	43.53
AACG00230	Aureococcus anophagefferens	4e-45	182	371	32.88
PP00206G00060	Physcomitrella patens	1e-44	177	502	28.88
TPCG00740	Thalassiosira pseudonana	3e-41	169	432	30.09
ES0182G00250	Ectocarpus siliculosus	3e-39	162	914	23.09
CV00G58140	Coccomyxa subellipsoidea C-169	5e-39	162	376	31.12
gsu54660	Galdieria sulphuraria	4e-38	160	370	30.54
CMCG02180	Cyanidioschyzon merolae	5e-38	159	372	28.76
ccr02940	Chondrus crispus	6e-37	155	373	30.29
Naga_1Chloroplast2	Nannochloropsis gaditana	3e-36	153	437	28.38
MRCC299_CG00630	Micromonas sp RCC299	9e-36	151	373	30.03
OS04G16820	Oryza sativa	2e-34	147	1056	23.58
OSCG00280	Oryza sativa	2e-34	147	1134	23.28
RCC4223.20g00070	Picochlorum_RCC4223	4e-33	143	385	28.57
PI00G30990	Picochlorum sp. SENEW3 (SE3)	5e-33	142	385	28.31
PP00171G00040	Physcomitrella patens	8e-33	130	118	57.63
PPCG00840	Physcomitrella patens	4e-32	139	370	30.27
HE0000G22850	Helicosporidium sp.	3e-31	131	269	30.86
ATR_CG00190	Amborella trichopoda	3e-30	134	369	28.46
PP00029G00790	Physcomitrella patens	3e-30	125	209	38.76
ATCG00190	Arabidopsis thaliana	8e-30	132	369	27.37
PP00695G00010	Physcomitrella patens	1e-29	126	314	30.25
PP00089G01130	Physcomitrella patens	2e-29	123	257	31.52
PP00130G00100	Physcomitrella patens	7e-29	123	344	29.07
OS05G22860	Oryza sativa	2e-27	121	351	27.07
HE0000G45380	Helicosporidium sp.	4e-26	112	153	43.79
ATR_00020G01200	Amborella trichopoda	7e-26	112	164	37.80
PP00329G00030	Physcomitrella patens	8e-25	107	135	43.70
PP00015G02020	Physcomitrella patens	2e-21	99.4	226	31.42
CNC64A_002G04810	Chlorella sp NC64A	4e-21	95.5	79	54.43
PP00096G00020	Physcomitrella patens	4e-20	93.6	120	44.17
ATR_01499G00010	Amborella trichopoda	4e-17	88.2	191	29.84
PP00377G00030	Physcomitrella patens	1e-16	84.0	147	35.37
PP00072G00150	Physcomitrella patens	3e-16	84.0	232	27.59
AP00G27450	Auxenochlorella protothecoides	4e-16	86.3	259	28.57
ES1847G00010	Ectocarpus siliculosus	3e-15	78.6	86	43.02
CNC64A_002G04820	Chlorella sp NC64A	4e-15	84.7	517	22.82
PP00377G00020	Physcomitrella patens	1e-14	79.3	234	29.06
ATR_00145G00340	Amborella trichopoda	1e-13	76.3	173	29.48
PP00130G00110	Physcomitrella patens	4e-13	75.1	246	26.83
ATR_00102G00580	Amborella trichopoda	1e-12	75.9	197	27.41
ES1346G00010	Ectocarpus siliculosus	2e-11	68.6	137	31.39
MRCC299_01G03020	Micromonas sp RCC299	1e-09	63.5	169	28.99
PP00106G00500	Physcomitrella patens	2e-09	65.1	234	26.92

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment