Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
CV00G12800	Coccomyxa subellipsoidea C-169	0.0	1175	565	100.00
AC00G27820	Asterochloris sp. Cgr-DA1pho v2.0	0.0	842	504	78.37
AP00G21430	Auxenochlorella protothecoides	0.0	691	514	65.56
PI00G51280	Picochlorum sp. SENEW3 (SE3)	0.0	674	541	59.70
CV00G12810	Coccomyxa subellipsoidea C-169	0.0	664	439	75.63
RCC4223.04g03450	Picochlorum_RCC4223	0.0	667	541	58.96
HE0000G41170	Helicosporidium sp.	0.0	632	511	59.30
CNC64A_025G01180	Chlorella sp NC64A	0.0	577	513	55.95
MRCC299_10G04230	Micromonas sp RCC299	1e-171	503	488	50.61
MP16G01280	Micromonas pusilla strain CCMP1545	4e-165	486	478	51.05
BPRRCC1105_06G01240	Bathycoccus prasinos	1e-164	490	502	48.61
OL16G00900	Ostreococcus lucimarinus	3e-159	472	489	48.47
OM_17G00960	Ostreococcus mediterraneus	4e-157	469	498	45.98
OT_17G00830	Ostreococcus tauri	7e-153	456	501	45.91
ORCC809_16G01780	Ostreococcus sp RCC809	2e-143	433	497	45.27
AT5G03760	Arabidopsis thaliana	8e-129	394	497	40.85
PP00036G00370	Physcomitrella patens	3e-128	393	501	41.32
ATR_00040G02570	Amborella trichopoda	7e-128	392	496	40.32
OS06G42020	Oryza sativa	8e-128	392	502	41.04
PP00065G00990	Physcomitrella patens	1e-127	391	501	41.12
PP00036G01070	Physcomitrella patens	7e-127	390	499	40.48
AT1G24070	Arabidopsis thaliana	9e-125	385	485	40.62
AT5G22740	Arabidopsis thaliana	7e-124	382	490	40.61
OS02G09930	Oryza sativa	9e-123	379	496	40.12
AT1G23480	Arabidopsis thaliana	5e-122	378	491	39.51
AT4G13410	Arabidopsis thaliana	2e-120	373	482	40.25
OS08G33740	Oryza sativa	8e-119	370	479	40.50
AT2G35650	Arabidopsis thaliana	1e-115	361	467	40.04
OS03G07350	Oryza sativa	1e-115	361	432	41.90
AT5G16190	Arabidopsis thaliana	5e-115	356	423	43.50
PP00224G00220	Physcomitrella patens	6e-115	363	530	36.79
AT4G31590	Arabidopsis thaliana	1e-113	360	424	41.98
OS07G43710	Oryza sativa	1e-113	357	510	38.82
PP00019G01110	Physcomitrella patens	4e-113	359	472	39.19
PP00373G00150	Physcomitrella patens	1e-112	357	426	41.31
PP00162G00740	Physcomitrella patens	3e-112	357	426	41.55
PP00089G01080	Physcomitrella patens	2e-111	355	470	37.45
AT3G07330	Arabidopsis thaliana	7e-111	353	519	37.38
AT2G24630	Arabidopsis thaliana	1e-110	352	424	40.33
AT3G56000	Arabidopsis thaliana	2e-110	347	497	37.42
AT3G28180	Arabidopsis thaliana	2e-110	351	376	44.95
OS08G15420	Oryza sativa	1e-109	351	428	41.82
OS03G26044	Oryza sativa	2e-109	346	497	38.03
OS07G03260	Oryza sativa	3e-109	348	428	42.99
OS05G43530	Oryza sativa	3e-109	348	514	39.49
ATR_00065G00270	Amborella trichopoda	9e-109	348	424	41.04
ATR_00019G01680	Amborella trichopoda	1e-108	347	424	40.80
OS03G56060	Oryza sativa	1e-108	340	363	44.90
OS02G51060	Oryza sativa	2e-108	342	497	37.42
OS09G25900	Oryza sativa	4e-108	346	421	39.90
PP00015G00680	Physcomitrella patens	3e-107	343	430	40.93
OS01G56130	Oryza sativa	1e-106	342	518	38.80
AT4G16590	Arabidopsis thaliana	3e-105	329	389	41.90
PP00164G00010	Physcomitrella patens	6e-105	337	430	40.93
OS10G26630	Oryza sativa	1e-104	332	436	40.37
AT4G07960	Arabidopsis thaliana	1e-103	334	476	37.82
ATR_00013G02120	Amborella trichopoda	2e-103	332	441	39.68
ATR_00072G01360	Amborella trichopoda	3e-98	308	314	45.86
OS06G12460	Oryza sativa	2e-91	299	388	39.69
CR06G04470	Chlamydomonas reinhardtii	2e-90	298	439	39.86
VC00G68920	Volvox carteri	2e-87	288	444	38.74
emh181270	Emiliania huxleyi	2e-58	204	318	40.57
emh488170	Emiliania huxleyi	2e-58	204	318	40.57
OS09G26770	Oryza sativa	8e-54	196	320	35.31
OM_13G00450	Ostreococcus mediterraneus	7e-34	141	291	32.30
ORCC809_20G02860	Ostreococcus sp RCC809	6e-33	138	242	33.88
OL20G02910	Ostreococcus lucimarinus	3e-32	136	242	34.30
OT_14G02980	Ostreococcus tauri	3e-25	114	246	33.33
AC00G21830	Asterochloris sp. Cgr-DA1pho v2.0	1e-15	84.0	264	27.27
ES0200G00060	Ectocarpus siliculosus	4e-15	82.8	295	27.80
ES0097G00300	Ectocarpus siliculosus	9e-15	81.6	259	30.89
ES0097G00210	Ectocarpus siliculosus	3e-14	80.5	238	29.41
Naga_100049g27	Nannochloropsis gaditana	2e-13	77.0	264	24.24
PI00G60790	Picochlorum sp. SENEW3 (SE3)	5e-13	76.3	265	24.15
emh647580	Emiliania huxleyi	2e-12	74.3	327	24.16
PP00372G00370	Physcomitrella patens	1e-11	71.2	254	24.80
Naga_100079g22	Nannochloropsis gaditana	4e-11	69.7	311	24.12
ES0185G00090	Ectocarpus siliculosus	1e-10	68.6	297	25.59
DDB_G0269124	Dictyostelium discoideum	5e-10	66.6	190	25.79
ccr65060	Chondrus crispus	2e-08	61.6	191	26.70
ES0097G00120	Ectocarpus siliculosus	1e-07	58.5	164	29.88
ENSG00000105509	Homo sapiens	3e-07	57.4	199	25.13
ENSMUSG00000003665	Mus musculus	3e-07	57.4	199	25.13
AC00G66050	Asterochloris sp. Cgr-DA1pho v2.0	5e-07	57.0	203	23.15
AC00G29940	Asterochloris sp. Cgr-DA1pho v2.0	1e-06	55.8	282	23.76
CV00G83580	Coccomyxa subellipsoidea C-169	1e-06	55.8	198	25.76
AC00G15120	Asterochloris sp. Cgr-DA1pho v2.0	5e-06	53.9	346	23.70

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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