Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
CR04G02050	Chlamydomonas reinhardtii	0.0	1022	524	100.00
CR04G02090	Chlamydomonas reinhardtii	1e-137	416	326	62.58
VC00G138900	Volvox carteri	4e-136	415	448	52.46
VC00G138920	Volvox carteri	7e-95	303	302	54.64
AC00G90710	Asterochloris sp. Cgr-DA1pho v2.0	4e-58	209	322	37.89
CNC64A_008G03360	Chlorella sp NC64A	2e-48	181	312	35.26
AP00G43440	Auxenochlorella protothecoides	6e-47	174	311	35.05
RCC4223.08g00790	Picochlorum_RCC4223	9e-44	167	320	33.44
PI00G68150	Picochlorum sp. SENEW3 (SE3)	3e-42	163	327	33.64
AT3G08040	Arabidopsis thaliana	1e-32	134	319	33.54
AC00G01430	Asterochloris sp. Cgr-DA1pho v2.0	3e-32	132	283	32.86
ATR_00022G03920	Amborella trichopoda	3e-28	121	303	34.32
ccr132100	Chondrus crispus	3e-28	119	311	29.90
AT1G51340	Arabidopsis thaliana	2e-27	119	292	34.59
OS10G13940	Oryza sativa	7e-27	117	316	29.75
OS03G11734	Oryza sativa	1e-26	117	314	33.76
gsu46120	Galdieria sulphuraria	8e-26	114	263	29.66
CV00G02400	Coccomyxa subellipsoidea C-169	2e-24	110	285	30.53
OS01G69010	Oryza sativa	2e-23	107	237	34.18
RCC4223.05g03110	Picochlorum_RCC4223	5e-21	100	252	32.14
ATR_00001G00540	Amborella trichopoda	7e-21	100	302	28.15
RCC4223.01g00960	Picochlorum_RCC4223	3e-20	98.6	305	28.52
gsu46140	Galdieria sulphuraria	4e-20	96.7	216	28.70
RCC4223.16g01830	Picochlorum_RCC4223	5e-20	97.4	316	28.48
PI00G22650	Picochlorum sp. SENEW3 (SE3)	7e-20	96.7	248	31.45
PI00G23630	Picochlorum sp. SENEW3 (SE3)	1e-19	96.3	372	27.69
PTI_05G02420	Phaeodactylum tricornutum	6e-19	94.0	322	29.19
PP00088G01140	Physcomitrella patens	1e-18	93.2	299	29.10
OS12G01580	Oryza sativa	1e-18	93.2	257	29.57
ORCC809_04G04310	Ostreococcus sp RCC809	1e-18	93.2	305	29.84
OM_02G01000	Ostreococcus mediterraneus	2e-18	92.4	315	29.52
OS09G37610	Oryza sativa	2e-18	92.4	301	27.24
PP00307G00460	Physcomitrella patens	6e-18	90.9	305	26.89
OT_04G00920	Ostreococcus tauri	6e-18	90.9	327	28.75
AC00G98560	Asterochloris sp. Cgr-DA1pho v2.0	3e-17	89.4	252	30.95
MP02G06270	Micromonas pusilla strain CCMP1545	5e-17	88.2	335	29.85
AT2G38330	Arabidopsis thaliana	7e-17	87.4	257	24.90
AT4G38380	Arabidopsis thaliana	6e-16	84.7	305	26.89
Naga_100034g7	Nannochloropsis gaditana	9e-16	84.3	303	27.72
AP00G56500	Auxenochlorella protothecoides	1e-15	84.0	331	29.91
ATR_00023G00030	Amborella trichopoda	2e-15	83.2	318	24.84
PI00G06430	Picochlorum sp. SENEW3 (SE3)	8e-15	81.3	249	30.92
Naga_100188g10	Nannochloropsis gaditana	2e-14	80.1	342	26.90
PTI_22G01840	Phaeodactylum tricornutum	3e-14	79.3	319	26.02
ES0061G00060	Ectocarpus siliculosus	4e-14	78.6	249	30.92
AT2G21340	Arabidopsis thaliana	6e-14	78.2	268	27.99
CV00G54780	Coccomyxa subellipsoidea C-169	7e-14	77.4	316	27.22
CM14G01150	Cyanidioschyzon merolae	7e-14	78.6	398	23.37
PTI_08G01330	Phaeodactylum tricornutum	8e-13	74.7	253	28.46
TP09G03050	Thalassiosira pseudonana	1e-12	74.3	289	24.57
BPRRCC1105_13G01990	Bathycoccus prasinos	8e-12	72.0	331	27.49
PP00058G00210	Physcomitrella patens	1e-11	71.6	304	26.64
AA0013G01820	Aureococcus anophagefferens	2e-11	70.1	317	29.02
OL04G00890	Ostreococcus lucimarinus	2e-11	70.5	324	28.70
PP00010G00180	Physcomitrella patens	2e-11	70.9	155	28.39
FC001G02410	Fragilariopsis cylindrus	2e-11	70.5	356	23.03
ES0282G00160	Ectocarpus siliculosus	3e-11	68.9	298	27.85
PP00142G00620	Physcomitrella patens	3e-11	69.7	231	29.44
CNC64A_006G00900	Chlorella sp NC64A	7e-11	68.9	238	31.51
TP08G04590	Thalassiosira pseudonana	2e-10	67.0	238	32.35
CV00G53940	Coccomyxa subellipsoidea C-169	7e-10	65.1	194	30.93
MRCC299_07G01230	Micromonas sp RCC299	7e-10	65.5	113	33.63
ATR_00001G02030	Amborella trichopoda	1e-09	64.7	322	26.40
OS02G58620	Oryza sativa	1e-09	65.1	323	23.84
FC009G02500	Fragilariopsis cylindrus	1e-09	64.3	225	31.56
BPRRCC1105_14G00830	Bathycoccus prasinos	2e-09	64.3	300	23.00
TP01G02090	Thalassiosira pseudonana	3e-09	63.5	118	32.20
RCC4223.02g03940	Picochlorum_RCC4223	6e-09	62.4	146	30.82
PI00G21330	Picochlorum sp. SENEW3 (SE3)	2e-08	60.5	148	33.11
AA0001G01050	Aureococcus anophagefferens	4e-08	60.1	268	27.24
Naga_100012g25	Nannochloropsis gaditana	9e-08	58.9	308	26.62
CNC64A_003G00990	Chlorella sp NC64A	1e-07	58.2	246	30.08
CR08G03260	Chlamydomonas reinhardtii	2e-07	57.8	302	27.48
AA0001G03460	Aureococcus anophagefferens	2e-07	57.0	261	28.74
FC005G05930	Fragilariopsis cylindrus	2e-07	57.0	118	33.05
CR17G09800	Chlamydomonas reinhardtii	3e-07	57.4	77	36.36
phs311920	Phytophtora sojae	3e-07	57.0	173	28.32
OS02G02980	Oryza sativa	5e-07	56.2	264	27.65
ES0086G00080	Ectocarpus siliculosus	5e-07	56.6	332	25.90
Naga_100006g98	Nannochloropsis gaditana	6e-07	56.2	296	25.68
PP00109G00260	Physcomitrella patens	7e-07	55.8	277	28.16
OL16G01470	Ostreococcus lucimarinus	1e-06	55.5	376	26.33
emh401640	Emiliania huxleyi	1e-06	55.1	218	27.52
AT4G39030	Arabidopsis thaliana	1e-06	55.1	252	25.40
PI00G61040	Picochlorum sp. SENEW3 (SE3)	2e-06	54.7	256	25.39
CV00G78640	Coccomyxa subellipsoidea C-169	2e-06	54.3	189	28.04
emh666280	Emiliania huxleyi	2e-06	54.3	181	33.70
TP04G05300	Thalassiosira pseudonana	2e-06	54.3	252	27.78
emh98570	Emiliania huxleyi	3e-06	53.9	181	33.70
RCC4223.02g08020	Picochlorum_RCC4223	9e-06	52.4	185	27.03

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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