Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
CNC64A_003G05440	Chlorella sp NC64A	6e-58	179	86	100.00
CV00G04830	Coccomyxa subellipsoidea C-169	2e-49	157	84	89.29
MRCC299_06G00410	Micromonas sp RCC299	1e-45	147	84	84.52
PP00017G01730	Physcomitrella patens	3e-45	147	75	90.67
PP00162G00900	Physcomitrella patens	5e-45	146	82	85.37
ATR_00156G00240	Amborella trichopoda	6e-45	146	75	90.67
MP09G00340	Micromonas pusilla strain CCMP1545	9e-45	145	86	81.40
AT2G43810	Arabidopsis thaliana	3e-44	144	80	83.75
OS04G31950	Oryza sativa	1e-43	143	75	88.00
OS02G30624	Oryza sativa	2e-43	142	75	88.00
AT3G59810	Arabidopsis thaliana	2e-43	142	73	90.41
CR03G02360	Chlamydomonas reinhardtii	5e-43	141	84	80.95
BPRRCC1105_07G04700	Bathycoccus prasinos	7e-43	140	81	81.48
ORCC809_14G00220	Ostreococcus sp RCC809	1e-42	140	77	84.42
OM_15G02540	Ostreococcus mediterraneus	3e-42	139	77	84.42
RCC4223.03g00500	Picochlorum_RCC4223	2e-41	137	74	85.14
ENSG00000164167	Homo sapiens	7e-41	135	74	83.78
ENSMUSG00000031683	Mus musculus	7e-41	135	74	83.78
WBGene00003080	Caenorhabditis elegans	4e-39	130	73	83.56
OT_16G00390	Ostreococcus tauri	7e-39	130	74	79.73
emh186280	Emiliania huxleyi	3e-37	126	75	77.33
emh352900	Emiliania huxleyi	3e-37	126	75	77.33
AP00G34660	Auxenochlorella protothecoides	2e-36	125	65	86.15
gsu83300	Galdieria sulphuraria	3e-36	124	69	81.16
AC00G05060	Asterochloris sp. Cgr-DA1pho v2.0	1e-35	121	75	80.00
PTI_02G04920	Phaeodactylum tricornutum	3e-35	122	74	72.97
ccr153460	Chondrus crispus	4e-35	121	78	69.23
FBgn0034564	Drosophila melanogaster	5e-35	120	77	71.43
AA0003G01780	Aureococcus anophagefferens	2e-34	120	91	65.93
FC023G02130	Fragilariopsis cylindrus	2e-34	119	77	71.43
gsu83320	Galdieria sulphuraria	5e-33	115	64	81.25
DDB_G0275719	Dictyostelium discoideum	4e-29	105	66	74.24
CM16G01390	Cyanidioschyzon merolae	9e-29	105	78	55.13
SPAC2F3.17c	Schizosaccharomyces pombe	1e-28	103	70	64.29
VC00G85400	Volvox carteri	4e-24	95.1	55	81.82
ES0054G00010	Ectocarpus siliculosus	2e-20	84.3	53	66.04
gsu82000	Galdieria sulphuraria	2e-20	83.6	66	53.03
gsu81980	Galdieria sulphuraria	2e-20	83.6	66	53.03
AC00G05050	Asterochloris sp. Cgr-DA1pho v2.0	2e-20	84.3	96	50.00
pte398610	Paramecium tetraurelia	2e-20	83.2	69	55.07
pte607980	Paramecium tetraurelia	3e-20	82.8	69	55.07
ccr22780	Chondrus crispus	6e-20	82.0	71	50.70
ENSMUSG00000020018	Mus musculus	1e-17	76.3	74	48.65
ATR_00029G03530	Amborella trichopoda	1e-17	75.9	69	49.28
OS11G43620	Oryza sativa	2e-17	75.5	69	47.83
CV00G07960	Coccomyxa subellipsoidea C-169	3e-17	75.1	79	41.77
AT4G30220	Arabidopsis thaliana	5e-17	74.7	69	49.28
OT_09G03860	Ostreococcus tauri	7e-17	73.9	77	41.56
MRCC299_14G02880	Micromonas sp RCC299	9e-17	73.6	73	43.84
OL09G03490	Ostreococcus lucimarinus	2e-16	72.8	71	46.48
CR05G04640	Chlamydomonas reinhardtii	3e-16	72.4	72	43.06
VC00G60500	Volvox carteri	4e-16	72.0	72	43.06
phs265020	Phytophtora sojae	6e-16	76.3	66	46.97
ES0305G00030	Ectocarpus siliculosus	7e-16	71.6	72	47.22
CNC64A_010G02140	Chlorella sp NC64A	7e-16	71.2	66	46.97
PTI_08G00280	Phaeodactylum tricornutum	8e-16	71.6	67	47.76
OM_10G03550	Ostreococcus mediterraneus	9e-16	70.9	71	45.07
AP00G21710	Auxenochlorella protothecoides	9e-16	70.9	66	45.45
PP00046G01070	Physcomitrella patens	9e-16	71.2	69	44.93
PP00219G00180	Physcomitrella patens	9e-16	71.2	69	44.93
FBgn0000426	Drosophila melanogaster	2e-15	70.5	66	48.48
ORCC809_09G02570	Ostreococcus sp RCC809	2e-15	70.1	66	45.45
RCC4223.07g01170	Picochlorum_RCC4223	2e-15	70.1	66	45.45
PI00G05130	Picochlorum sp. SENEW3 (SE3)	2e-15	70.1	66	45.45
TP06G06860	Thalassiosira pseudonana	2e-15	70.5	66	46.97
Naga_100120g20	Nannochloropsis gaditana	3e-15	69.7	66	43.94
MP03G01170	Micromonas pusilla strain CCMP1545	6e-15	68.9	66	43.94
WBGene00004918	Caenorhabditis elegans	7e-15	68.9	69	44.93
DDB_G0278821	Dictyostelium discoideum	1e-14	68.2	74	43.24
AC00G62270	Asterochloris sp. Cgr-DA1pho v2.0	1e-13	65.1	74	35.14
pte539220	Paramecium tetraurelia	2e-13	64.7	66	45.45
pte530990	Paramecium tetraurelia	2e-13	64.7	66	45.45
BPRRCC1105_10G00710	Bathycoccus prasinos	7e-13	63.5	70	45.71
FC005G01900	Fragilariopsis cylindrus	2e-12	62.8	72	40.28
SPBC3E7.14	Schizosaccharomyces pombe	2e-12	62.0	71	43.66
OS02G08090	Oryza sativa	5e-12	60.8	54	46.30
YDR378C	Saccharomyces cerevisiae strain S288C	1e-10	57.4	80	41.25
emh111420	Emiliania huxleyi	2e-10	56.6	66	37.88
CM17G01710	Cyanidioschyzon merolae	6e-10	55.8	75	37.33
AA0005G02850	Aureococcus anophagefferens	6e-10	55.8	81	34.57
AT2G14285	Arabidopsis thaliana	9e-10	54.7	49	48.98
YPR182W	Saccharomyces cerevisiae strain S288C	2e-09	53.9	67	43.28
ENSG00000139343	Homo sapiens	5e-07	47.8	51	47.06
SPBC30D10.06	Schizosaccharomyces pombe	1e-06	47.0	67	32.84
emh379530	Emiliania huxleyi	2e-06	45.8	66	33.33
gsu20830	Galdieria sulphuraria	2e-06	46.2	67	35.82
PP00475G00040	Physcomitrella patens	2e-06	45.8	74	36.49
AA0008G00280	Aureococcus anophagefferens	2e-06	46.2	67	32.84
gsu20810	Galdieria sulphuraria	2e-06	45.8	67	35.82
OT_06G01480	Ostreococcus tauri	3e-06	45.4	67	31.34
BPRRCC1105_01G01540	Bathycoccus prasinos	3e-06	45.1	66	34.85
OL06G01450	Ostreococcus lucimarinus	5e-06	44.7	67	31.34
Naga_100065g3	Nannochloropsis gaditana	6e-06	44.7	67	32.84
PP00218G00460	Physcomitrella patens	6e-06	44.3	74	36.49
ORCC809_06G01370	Ostreococcus sp RCC809	8e-06	44.3	67	29.85
MP06G02280	Micromonas pusilla strain CCMP1545	9e-06	44.3	67	29.85

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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