Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00166G00270	Amborella trichopoda	0.0	774	373	100.00
ATR_00111G00950	Amborella trichopoda	2e-142	412	248	81.85
ATR_00111G00310	Amborella trichopoda	2e-103	313	273	59.34
ATR_00149G00620	Amborella trichopoda	1e-78	247	144	81.94
ATR_00149G00630	Amborella trichopoda	4e-69	223	137	80.29
AT3G60450	Arabidopsis thaliana	3e-56	191	244	43.44
AT3G60440	Arabidopsis thaliana	5e-56	191	245	44.90
AT3G60420	Arabidopsis thaliana	7e-48	171	223	43.50
OS03G01180	Oryza sativa	1e-41	152	242	37.19
PP00109G00860	Physcomitrella patens	4e-26	110	244	33.61
ATR_00157G00160	Amborella trichopoda	1e-13	71.2	41	73.17
gsu51700	Galdieria sulphuraria	1e-12	70.1	233	29.18
CV00G01790	Coccomyxa subellipsoidea C-169	4e-11	67.4	75	42.67
CR03G05450	Chlamydomonas reinhardtii	9e-11	66.2	221	25.34
ccr39920	Chondrus crispus	6e-10	62.4	245	24.49
CM11G01730	Cyanidioschyzon merolae	4e-09	60.8	108	35.19
VC00G04470	Volvox carteri	1e-08	58.9	244	23.77
ccr178780	Chondrus crispus	4e-07	54.3	73	35.62
WBGene00022752	Caenorhabditis elegans	4e-06	50.1	76	34.21
PTI_05G00180	Phaeodactylum tricornutum	5e-06	52.0	179	30.73

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment