Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00062G00050	Amborella trichopoda	0.0	591	284	100.00
ATR_00062G00020	Amborella trichopoda	0.0	539	290	93.10
ATR_00019G03570	Amborella trichopoda	3e-159	452	279	77.42
ATR_00019G03590	Amborella trichopoda	5e-152	435	293	70.65
AT5G57550	Arabidopsis thaliana	3e-135	391	276	65.94
AT4G25810	Arabidopsis thaliana	1e-133	387	268	68.66
AT5G57560	Arabidopsis thaliana	2e-133	387	270	67.78
OS06G48200	Oryza sativa	1e-132	385	280	62.86
AT3G23730	Arabidopsis thaliana	2e-132	384	290	62.76
AT4G14130	Arabidopsis thaliana	4e-131	381	286	63.99
AT4G30270	Arabidopsis thaliana	1e-129	376	270	67.41
OS06G48180	Oryza sativa	2e-126	369	264	61.74
OS06G48160	Oryza sativa	2e-125	366	289	59.52
ATR_00065G01750	Amborella trichopoda	4e-124	363	287	60.63
ATR_00065G01770	Amborella trichopoda	6e-123	360	285	60.00
AT2G18800	Arabidopsis thaliana	8e-123	360	279	61.65
AT5G48070	Arabidopsis thaliana	4e-120	352	256	63.67
ATR_00062G00060	Amborella trichopoda	2e-118	345	196	90.82
AT5G57540	Arabidopsis thaliana	2e-118	348	260	63.08
AT5G57530	Arabidopsis thaliana	2e-118	348	260	63.46
AT4G25820	Arabidopsis thaliana	7e-115	339	268	61.94
AT4G30280	Arabidopsis thaliana	3e-108	322	257	62.26
AT4G30290	Arabidopsis thaliana	4e-108	322	257	62.65
AT1G65310	Arabidopsis thaliana	1e-107	321	256	61.33
AT5G13870	Arabidopsis thaliana	4e-106	317	285	55.44
ATR_00016G02940	Amborella trichopoda	7e-106	317	259	58.30
OS04G51460	Oryza sativa	8e-103	308	277	53.07
OS04G51520	Oryza sativa	2e-102	309	284	51.06
OS11G33270	Oryza sativa	2e-102	308	259	55.98
PP00168G00050	Physcomitrella patens	1e-99	302	281	53.38
OS06G48170	Oryza sativa	2e-99	300	261	52.87
AT2G06850	Arabidopsis thaliana	3e-99	300	288	53.82
PP00168G00160	Physcomitrella patens	6e-99	299	280	51.43
ATR_00019G03550	Amborella trichopoda	6e-99	298	277	52.35
PP00309G00230	Physcomitrella patens	1e-95	291	279	49.10
ATR_00026G01160	Amborella trichopoda	7e-95	288	264	49.62
PP00004G00260	Physcomitrella patens	7e-95	289	276	49.28
OS08G14210	Oryza sativa	1e-94	291	278	49.28
AT4G03210	Arabidopsis thaliana	9e-94	285	243	54.73
AT4G28850	Arabidopsis thaliana	1e-93	285	287	48.78
AT5G65730	Arabidopsis thaliana	2e-92	282	280	46.43
AT4G37800	Arabidopsis thaliana	2e-92	282	287	47.39
PP00309G00220	Physcomitrella patens	3e-92	283	262	50.38
OS04G51450	Oryza sativa	3e-92	283	258	52.33
OS08G14200	Oryza sativa	4e-92	281	287	48.78
PP00004G00240	Physcomitrella patens	1e-91	280	287	47.39
PP00026G00650	Physcomitrella patens	1e-90	278	248	52.82
ATR_00026G01070	Amborella trichopoda	2e-88	271	266	50.00
ATR_00453G00010	Amborella trichopoda	3e-88	273	282	47.16
OS08G13920	Oryza sativa	2e-87	269	263	50.19
AT2G14620	Arabidopsis thaliana	2e-86	267	267	48.31
PP00309G00140	Physcomitrella patens	4e-85	264	273	47.25
AT1G11545	Arabidopsis thaliana	1e-84	263	299	47.49
PP00272G00150	Physcomitrella patens	1e-84	262	262	50.00
ATR_00004G02430	Amborella trichopoda	1e-82	258	267	47.94
OS07G34580	Oryza sativa	2e-81	255	268	48.51
PP00195G00150	Physcomitrella patens	6e-81	253	264	47.35
OS02G17880	Oryza sativa	2e-80	252	263	47.53
AT4G13090	Arabidopsis thaliana	6e-80	250	288	44.44
PP00193G00050	Physcomitrella patens	3e-79	250	253	48.22
OS08G13980	Oryza sativa	5e-79	248	268	46.64
OS06G22919	Oryza sativa	5e-79	248	285	44.21
OS02G17900	Oryza sativa	2e-78	246	267	46.07
PP00291G00470	Physcomitrella patens	2e-78	247	251	47.01
ATR_00026G01110	Amborella trichopoda	1e-77	241	210	52.38
PP00618G00010	Physcomitrella patens	4e-76	244	251	46.22
AT4G13080	Arabidopsis thaliana	5e-76	240	262	47.33
AT3G25050	Arabidopsis thaliana	7e-75	237	271	44.65
ATR_00109G01360	Amborella trichopoda	1e-73	231	195	54.87
ATR_00026G01130	Amborella trichopoda	6e-72	226	184	55.43
ATR_00019G03580	Amborella trichopoda	1e-68	216	148	67.57
OS04G51510	Oryza sativa	5e-68	218	274	42.70
PP00213G00650	Physcomitrella patens	4e-67	218	290	41.38
PP00410G00130	Physcomitrella patens	2e-65	213	288	38.89
ATR_00062G00030	Amborella trichopoda	1e-64	204	102	96.08
OS06G13040	Oryza sativa	1e-64	211	270	43.33
PP00122G00290	Physcomitrella patens	5e-64	209	245	44.49
PP00309G00200	Physcomitrella patens	4e-63	205	228	45.18
PP00156G00440	Physcomitrella patens	2e-62	205	287	39.02
PP00156G00420	Physcomitrella patens	2e-62	205	287	39.02
OS07G29750	Oryza sativa	3e-61	202	268	41.04
AT2G36870	Arabidopsis thaliana	7e-61	201	287	41.11
ATR_00337G00020	Amborella trichopoda	2e-60	194	108	88.89
PP00019G00220	Physcomitrella patens	3e-60	199	252	42.46
AT3G44990	Arabidopsis thaliana	3e-59	197	261	42.53
PP00486G00100	Physcomitrella patens	4e-59	196	237	41.35
PP00486G00080	Physcomitrella patens	4e-59	196	237	41.35
PP00011G01530	Physcomitrella patens	5e-59	197	254	40.94
ATR_00082G00420	Amborella trichopoda	2e-58	195	270	41.48
OS10G39840	Oryza sativa	2e-58	195	264	40.15
OS03G01800	Oryza sativa	2e-56	190	262	40.46
PP00081G01240	Physcomitrella patens	4e-56	188	240	42.08
ATR_00013G00910	Amborella trichopoda	8e-55	183	221	42.53
OS02G57770	Oryza sativa	1e-54	186	267	40.07
PP00074G00080	Physcomitrella patens	1e-54	189	254	38.98
OS03G13570	Oryza sativa	2e-54	186	271	35.06
AT1G32170	Arabidopsis thaliana	3e-54	185	245	40.00
OS10G02770	Oryza sativa	6e-54	184	264	35.23
AT1G10550	Arabidopsis thaliana	1e-53	183	275	36.36
PP00005G00910	Physcomitrella patens	2e-53	185	255	37.25
ATR_00026G01150	Amborella trichopoda	5e-53	176	146	54.11
ATR_00024G00080	Amborella trichopoda	2e-52	180	272	34.56
PP00048G00500	Physcomitrella patens	4e-51	176	271	37.27
PP00089G00910	Physcomitrella patens	5e-51	176	271	38.75
PP00141G00620	Physcomitrella patens	4e-50	173	286	36.01
AT1G14720	Arabidopsis thaliana	5e-50	174	267	35.58
ATR_00062G00010	Amborella trichopoda	1e-49	168	88	92.05
AT3G48580	Arabidopsis thaliana	2e-49	171	255	37.25
AT2G01850	Arabidopsis thaliana	2e-48	170	265	34.34
OS09G23220	Oryza sativa	3e-48	169	273	34.43
AT4G18990	Arabidopsis thaliana	1e-46	166	259	35.91
PP00346G00070	Physcomitrella patens	5e-46	164	268	36.57
OS02G03550	Oryza sativa	1e-44	160	243	36.63
OS03G63760	Oryza sativa	4e-42	154	279	31.54
OS02G46910	Oryza sativa	5e-42	153	294	32.65
ATR_00048G00580	Amborella trichopoda	2e-41	150	225	36.00
OS10G42670	Oryza sativa	2e-37	140	295	31.19
PP00089G00960	Physcomitrella patens	4e-37	137	154	46.75
ATR_00069G00950	Amborella trichopoda	9e-22	95.5	178	32.02
PP00002G02710	Physcomitrella patens	1e-19	85.9	76	55.26
ATR_00055G01550	Amborella trichopoda	2e-19	86.3	113	40.71
PP00353G00180	Physcomitrella patens	6e-19	87.4	158	34.81
OS03G02610	Oryza sativa	5e-18	85.5	177	35.03
ATR_01729G00020	Amborella trichopoda	3e-17	79.0	63	55.56
PP00024G01140	Physcomitrella patens	3e-17	85.5	179	33.52
ATR_00065G01730	Amborella trichopoda	6e-17	78.2	69	53.62
PP00037G01500	Physcomitrella patens	4e-15	79.0	171	28.07
ATR_00004G02620	Amborella trichopoda	1e-14	72.4	71	49.30
YLR213C	Saccharomyces cerevisiae strain S288C	3e-14	75.9	207	31.88
YGR189C	Saccharomyces cerevisiae strain S288C	3e-11	67.0	181	28.73
ATR_00065G01780	Amborella trichopoda	2e-10	60.8	88	36.36
ATR_00065G01720	Amborella trichopoda	3e-07	52.0	22	86.36
OS04G53950	Oryza sativa	1e-06	53.1	68	39.71
YEL040W	Saccharomyces cerevisiae strain S288C	6e-06	51.2	153	28.10

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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