Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00054G00710	Amborella trichopoda	0.0	2199	1063	100.00
OS03G48300	Oryza sativa	0.0	1815	1037	84.96
AT5G15070	Arabidopsis thaliana	0.0	1785	1064	81.77
AT3G01310	Arabidopsis thaliana	0.0	1756	1064	81.20
OS01G56980	Oryza sativa	0.0	1551	1069	71.94
PP00070G01260	Physcomitrella patens	0.0	1536	1058	71.27
PP00112G00240	Physcomitrella patens	0.0	1527	1034	73.21
AC00G52180	Asterochloris sp. Cgr-DA1pho v2.0	0.0	933	1008	50.99
CNC64A_005G01870	Chlorella sp NC64A	0.0	895	1077	48.56
MRCC299_04G04580	Micromonas sp RCC299	0.0	860	1050	46.57
OL03G03010	Ostreococcus lucimarinus	0.0	858	1010	47.33
ORCC809_06G04200	Ostreococcus sp RCC809	0.0	851	1131	43.68
OM_09G03190	Ostreococcus mediterraneus	0.0	822	1145	42.45
OT_03G03070	Ostreococcus tauri	0.0	792	1025	44.88
FBgn0027279	Drosophila melanogaster	0.0	736	978	43.87
ENSG00000145725	Homo sapiens	0.0	720	982	44.50
TP02G08430	Thalassiosira pseudonana	0.0	678	975	41.64
phs362880	Phytophtora sojae	0.0	679	1093	40.35
CV00G92490	Coccomyxa subellipsoidea C-169	0.0	657	632	55.38
RCC4223.09g01180	Picochlorum_RCC4223	0.0	655	628	56.05
PI00G33720	Picochlorum sp. SENEW3 (SE3)	0.0	650	628	56.21
WBGene00018508	Caenorhabditis elegans	0.0	641	1002	40.42
MP05G03560	Micromonas pusilla strain CCMP1545	0.0	628	660	51.97
FC005G10040	Fragilariopsis cylindrus	0.0	566	767	43.29
emh483710	Emiliania huxleyi	0.0	570	1063	35.37
pte664940	Paramecium tetraurelia	1e-169	533	879	39.36
pte599340	Paramecium tetraurelia	9e-168	528	851	39.72
emh565740	Emiliania huxleyi	9e-165	510	740	43.51
AA0014G02190	Aureococcus anophagefferens	1e-163	509	641	45.55
emh375850	Emiliania huxleyi	1e-157	492	741	43.05
VC00G146720	Volvox carteri	4e-155	507	495	54.75
CR03G09710	Chlamydomonas reinhardtii	1e-152	501	506	52.96
HE0000G10040	Helicosporidium sp.	4e-148	457	445	55.73
emh92080	Emiliania huxleyi	1e-144	458	772	38.47
SPCC1672.06c	Schizosaccharomyces pombe	7e-137	443	878	34.97
BPRRCC1105_09G03180	Bathycoccus prasinos	2e-118	404	467	49.89
CR01G11320	Chlamydomonas reinhardtii	7e-112	390	322	59.01
phs223530	Phytophtora sojae	1e-101	348	272	60.29
ES0425G00030	Ectocarpus siliculosus	2e-98	345	431	45.01
PTI_11G00860	Phaeodactylum tricornutum	3e-97	342	347	50.43
VC00G13030	Volvox carteri	4e-94	337	406	46.31
OS01G56960	Oryza sativa	9e-91	300	263	59.70
CM09G02100	Cyanidioschyzon merolae	8e-90	298	311	50.48
CM09G02370	Cyanidioschyzon merolae	6e-89	295	311	50.48
emh739850	Emiliania huxleyi	4e-88	311	305	50.49
AP00G16430	Auxenochlorella protothecoides	3e-78	279	367	47.41
DDB_G0284617	Dictyostelium discoideum	1e-75	263	312	45.51
gsu105930	Galdieria sulphuraria	5e-72	249	332	40.96
ccr179200	Chondrus crispus	2e-53	194	251	44.22
Naga_101571g1	Nannochloropsis gaditana	2e-31	129	135	48.89
HE0000G36530	Helicosporidium sp.	7e-24	106	196	37.24
emh07790	Emiliania huxleyi	9e-20	94.7	196	32.14
FC005G10050	Fragilariopsis cylindrus	1e-14	80.5	119	35.29

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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