Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00028G00950	Amborella trichopoda	0.0	588	287	100.00
ATR_00028G00930	Amborella trichopoda	0.0	508	276	89.13
ATR_00025G03910	Amborella trichopoda	4e-139	410	244	82.79
ATR_00028G00960	Amborella trichopoda	1e-117	343	207	83.09
ATR_00028G00940	Amborella trichopoda	3e-85	260	206	66.99
AT1G73050	Arabidopsis thaliana	3e-62	212	244	47.54
ATR_00028G00970	Amborella trichopoda	1e-54	183	104	84.62
ATR_00028G00920	Amborella trichopoda	7e-50	167	93	78.49
OS06G44540	Oryza sativa	6e-49	176	253	42.69
ATR_00069G01340	Amborella trichopoda	7e-43	159	288	36.46
AT1G12570	Arabidopsis thaliana	2e-39	149	278	35.61
OS04G48400	Oryza sativa	2e-39	149	287	36.59
PP00078G00400	Physcomitrella patens	8e-37	142	271	35.42
AT1G72970	Arabidopsis thaliana	2e-36	141	274	33.21
OS02G45530	Oryza sativa	2e-36	140	287	34.49
OS09G19930	Oryza sativa	2e-36	140	278	36.33
OS08G31030	Oryza sativa	4e-36	140	278	33.45
AT5G51950	Arabidopsis thaliana	1e-34	135	289	35.29
OS03G02700	Oryza sativa	6e-34	134	292	31.85
OS10G38050	Oryza sativa	6e-34	134	302	33.11
AT5G51930	Arabidopsis thaliana	5e-33	131	299	31.77
ATR_00036G00190	Amborella trichopoda	7e-33	130	279	32.97
PP00003G02580	Physcomitrella patens	4e-32	129	313	32.27
PP00472G00030	Physcomitrella patens	5e-31	124	255	33.73
AT3G56060	Arabidopsis thaliana	5e-30	122	276	31.52
AT1G14190	Arabidopsis thaliana	1e-25	109	229	35.37
AT1G14185	Arabidopsis thaliana	1e-24	107	229	34.06
PP00085G00680	Physcomitrella patens	1e-23	105	321	31.15
FC007G06160	Fragilariopsis cylindrus	2e-16	83.2	281	26.69
ATR_00010G04850	Amborella trichopoda	7e-14	74.3	219	27.85
ES0003G00250	Ectocarpus siliculosus	8e-14	75.1	284	23.94
phs197510	Phytophtora sojae	2e-13	74.3	241	27.39
PTI_02G04580	Phaeodactylum tricornutum	1e-12	71.2	260	27.69
phs198830	Phytophtora sojae	2e-12	71.2	242	26.03
ENSG00000016391	Homo sapiens	1e-11	68.9	249	26.91
VC00G100730	Volvox carteri	1e-11	68.6	284	26.06
FBgn0030592	Drosophila melanogaster	2e-11	68.2	272	27.21
CR12G06760	Chlamydomonas reinhardtii	9e-11	65.9	270	24.81
PP00078G00390	Physcomitrella patens	2e-10	65.1	198	27.27
FBgn0030590	Drosophila melanogaster	3e-10	64.7	280	28.93
phs198930	Phytophtora sojae	4e-10	63.9	200	29.50
FBgn0266435	Drosophila melanogaster	1e-09	62.8	281	27.76
FBgn0030596	Drosophila melanogaster	2e-09	62.0	282	24.82
CNC64A_037G00370	Chlorella sp NC64A	2e-09	62.0	263	25.86
emh310600	Emiliania huxleyi	4e-09	61.2	273	24.54
CM16G00880	Cyanidioschyzon merolae	7e-09	60.5	216	27.31
gsu91210	Galdieria sulphuraria	8e-09	59.7	74	50.00
Naga_100099g13	Nannochloropsis gaditana	8e-09	60.5	284	25.70
CV00G70600	Coccomyxa subellipsoidea C-169	4e-08	58.2	61	50.82
FBgn0030593	Drosophila melanogaster	1e-07	56.2	260	26.15
phs157680	Phytophtora sojae	2e-07	56.2	136	31.62
AA0010G01840	Aureococcus anophagefferens	2e-07	55.8	49	55.10
AC00G81700	Asterochloris sp. Cgr-DA1pho v2.0	2e-07	55.8	60	46.67
TP08G04640	Thalassiosira pseudonana	4e-07	55.1	267	23.60
FC014G01320	Fragilariopsis cylindrus	4e-07	55.1	51	49.02
WBGene00007917	Caenorhabditis elegans	5e-07	54.7	200	25.50
emh610010	Emiliania huxleyi	2e-06	53.1	59	45.76
Naga_100105g4	Nannochloropsis gaditana	4e-06	52.0	50	50.00
FBgn0030587	Drosophila melanogaster	6e-06	51.2	48	60.42
emh381540	Emiliania huxleyi	1e-05	50.8	48	50.00

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment