Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00028G00930	Amborella trichopoda	0.0	605	296	100.00
ATR_00028G00950	Amborella trichopoda	2e-179	504	274	89.05
ATR_00025G03910	Amborella trichopoda	9e-139	410	244	83.20
ATR_00028G00960	Amborella trichopoda	4e-116	340	207	82.61
ATR_00028G00940	Amborella trichopoda	1e-86	264	206	69.42
AT1G73050	Arabidopsis thaliana	8e-62	211	244	48.36
ATR_00028G00970	Amborella trichopoda	1e-52	178	104	84.62
ATR_00028G00920	Amborella trichopoda	9e-49	164	93	79.57
OS06G44540	Oryza sativa	1e-47	173	255	44.31
ATR_00069G01340	Amborella trichopoda	7e-43	159	288	36.81
OS04G48400	Oryza sativa	2e-40	152	287	36.59
AT1G12570	Arabidopsis thaliana	3e-40	152	278	35.61
AT1G72970	Arabidopsis thaliana	9e-37	142	274	35.04
OS02G45530	Oryza sativa	1e-36	141	287	35.19
OS09G19930	Oryza sativa	2e-36	141	278	35.25
PP00078G00400	Physcomitrella patens	5e-36	140	271	36.90
OS03G02700	Oryza sativa	6e-35	137	287	32.06
OS08G31030	Oryza sativa	1e-34	135	272	33.09
ATR_00036G00190	Amborella trichopoda	6e-34	134	259	33.98
OS10G38050	Oryza sativa	8e-34	134	302	32.45
AT5G51930	Arabidopsis thaliana	2e-33	133	281	33.81
AT5G51950	Arabidopsis thaliana	6e-33	131	291	35.05
PP00003G02580	Physcomitrella patens	2e-32	130	302	32.12
PP00472G00030	Physcomitrella patens	8e-31	124	255	34.51
AT3G56060	Arabidopsis thaliana	5e-30	123	276	32.61
PP00085G00680	Physcomitrella patens	3e-25	109	292	33.22
AT1G14190	Arabidopsis thaliana	1e-24	107	229	34.93
AT1G14185	Arabidopsis thaliana	1e-24	107	229	34.50
FC007G06160	Fragilariopsis cylindrus	2e-16	83.2	279	26.16
ES0003G00250	Ectocarpus siliculosus	5e-16	82.0	277	26.71
ATR_00010G04850	Amborella trichopoda	1e-14	76.6	255	27.84
phs197510	Phytophtora sojae	4e-13	73.2	256	27.73
FBgn0030596	Drosophila melanogaster	6e-12	69.7	283	26.15
PTI_02G04580	Phaeodactylum tricornutum	6e-12	69.7	270	25.93
FBgn0030592	Drosophila melanogaster	9e-12	69.3	274	27.74
FBgn0030598	Drosophila melanogaster	2e-11	68.2	290	26.21
FBgn0030590	Drosophila melanogaster	5e-11	67.0	283	27.56
phs198830	Phytophtora sojae	7e-11	66.6	270	25.56
VC00G100730	Volvox carteri	1e-10	65.5	281	24.91
PP00078G00390	Physcomitrella patens	2e-10	65.1	198	29.80
FBgn0039415	Drosophila melanogaster	2e-10	65.1	291	26.12
ENSG00000016391	Homo sapiens	3e-10	64.7	247	27.53
FBgn0266435	Drosophila melanogaster	4e-10	64.3	284	26.76
Naga_100099g13	Nannochloropsis gaditana	8e-10	63.5	279	25.09
phs198930	Phytophtora sojae	1e-09	62.8	251	27.49
FBgn0030593	Drosophila melanogaster	3e-09	61.6	283	25.44
CV00G70600	Coccomyxa subellipsoidea C-169	5e-09	60.8	272	26.47
AC00G81700	Asterochloris sp. Cgr-DA1pho v2.0	1e-08	59.7	275	25.45
TP08G04640	Thalassiosira pseudonana	2e-08	58.9	269	25.65
gsu91210	Galdieria sulphuraria	6e-08	57.0	244	26.64
CM16G00880	Cyanidioschyzon merolae	6e-08	57.8	74	43.24
emh310600	Emiliania huxleyi	2e-07	56.2	273	23.81
FBgn0030587	Drosophila melanogaster	1e-06	53.9	295	25.42
AA0010G01840	Aureococcus anophagefferens	1e-06	53.5	273	22.34
phs157680	Phytophtora sojae	2e-06	53.1	136	30.15
emh610010	Emiliania huxleyi	2e-06	53.1	60	43.33

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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