Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00022G02410	Amborella trichopoda	0.0	629	307	100.00
ATR_00022G02450	Amborella trichopoda	0.0	597	307	94.14
ATR_00022G02400	Amborella trichopoda	0.0	579	307	89.90
AT3G45140	Arabidopsis thaliana	5e-139	422	307	65.80
OS02G10120	Oryza sativa	2e-135	414	307	63.19
ATR_00049G02180	Amborella trichopoda	3e-126	389	309	59.22
OS08G39840	Oryza sativa	8e-124	383	308	61.04
OS08G39850	Oryza sativa	1e-122	380	308	60.71
AT1G67560	Arabidopsis thaliana	1e-118	369	309	56.96
AT1G72520	Arabidopsis thaliana	1e-115	362	308	56.17
OS12G37350	Oryza sativa	9e-112	338	314	55.41
ATR_00024G02970	Amborella trichopoda	9e-112	345	308	51.95
AT1G17420	Arabidopsis thaliana	4e-109	344	308	53.90
PP00070G00750	Physcomitrella patens	3e-106	338	308	51.30
OS12G37260	Oryza sativa	9e-106	335	316	56.01
OS03G08220	Oryza sativa	8e-105	333	310	53.23
PP00021G01990	Physcomitrella patens	2e-101	325	307	50.49
PP00171G00680	Physcomitrella patens	2e-100	322	307	50.49
AT1G55020	Arabidopsis thaliana	3e-100	320	307	51.14
PP00232G00410	Physcomitrella patens	2e-99	320	307	50.16
PP00097G01010	Physcomitrella patens	5e-98	314	307	48.53
AT3G22400	Arabidopsis thaliana	2e-96	310	312	48.40
PP00312G00290	Physcomitrella patens	1e-93	290	308	47.08
PP00505G00140	Physcomitrella patens	1e-93	287	307	47.56
PP00434G00160	Physcomitrella patens	3e-92	299	307	48.53
ATR_00066G00560	Amborella trichopoda	3e-90	292	312	47.44
OS03G49260	Oryza sativa	1e-89	291	313	46.65
OS03G49350	Oryza sativa	2e-89	287	314	48.41
OS03G52860	Oryza sativa	7e-88	287	313	46.01
OS03G49380	Oryza sativa	2e-86	283	318	45.60
PP00419G00050	Physcomitrella patens	2e-86	284	309	46.60
PP00419G00010	Physcomitrella patens	4e-86	283	309	45.95
PP00419G00020	Physcomitrella patens	2e-85	281	307	42.35
PP00419G00030	Physcomitrella patens	2e-85	281	307	42.35
PP00036G01900	Physcomitrella patens	1e-80	268	303	45.21
OS11G36719	Oryza sativa	4e-80	266	313	45.69
OS05G23880	Oryza sativa	7e-78	259	314	43.63
ATR_00103G00230	Amborella trichopoda	2e-69	223	257	44.36
CV00G19880	Coccomyxa subellipsoidea C-169	2e-68	231	309	42.07
ATR_00022G02900	Amborella trichopoda	2e-67	218	257	45.14
PP00190G00290	Physcomitrella patens	9e-66	226	179	54.19
AC00G29780	Asterochloris sp. Cgr-DA1pho v2.0	3e-60	202	272	40.81
CV00G27150	Coccomyxa subellipsoidea C-169	5e-58	206	315	40.00
CR12G02920	Chlamydomonas reinhardtii	1e-51	188	326	37.73
CNC64A_001G03010	Chlorella sp NC64A	2e-50	176	326	36.20
VC00G96890	Volvox carteri	5e-49	181	327	36.39
VC00G96880	Volvox carteri	3e-48	178	327	35.47
VC00G90070	Volvox carteri	4e-45	169	342	35.67
VC00G90100	Volvox carteri	9e-37	145	229	39.30
VC00G90090	Volvox carteri	6e-21	98.2	119	43.70
ENSG00000179477	Homo sapiens	4e-20	95.1	295	25.08
ENSMUSG00000000320	Mus musculus	6e-20	94.4	290	27.93
OS02G19790	Oryza sativa	1e-19	90.5	152	32.89
ENSMUSG00000032807	Mus musculus	2e-19	92.8	295	25.08
ENSG00000275565	Homo sapiens	4e-18	89.0	309	25.89
ENSG00000012779	Homo sapiens	4e-18	89.0	309	25.89
OL07G01910	Ostreococcus lucimarinus	4e-18	89.0	301	24.25
ENSMUSG00000018924	Mus musculus	4e-17	85.5	291	24.40
ENSG00000179593	Homo sapiens	6e-16	82.0	289	25.61
OS04G37430	Oryza sativa	9e-13	72.4	54	57.41
OS06G04420	Oryza sativa	1e-11	65.1	98	37.76
ccr28460	Chondrus crispus	1e-10	66.2	321	24.92
ES0424G00020	Ectocarpus siliculosus	1e-10	66.2	196	30.10
ES0424G00010	Ectocarpus siliculosus	2e-10	65.5	318	26.42
ES0010G00190	Ectocarpus siliculosus	8e-10	63.5	271	26.20
ES0010G00330	Ectocarpus siliculosus	3e-09	62.0	320	24.69
ATR_00022G02890	Amborella trichopoda	1e-08	59.7	52	53.85
OS05G28770	Oryza sativa	9e-08	57.0	55	43.64
PP00209G00410	Physcomitrella patens	2e-06	50.8	102	30.39

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment