Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00019G03590	Amborella trichopoda	0.0	650	313	100.00
ATR_00019G03570	Amborella trichopoda	1e-160	457	306	71.90
ATR_00062G00050	Amborella trichopoda	3e-151	433	293	70.65
ATR_00062G00020	Amborella trichopoda	3e-149	428	295	70.85
AT4G25810	Arabidopsis thaliana	6e-127	371	292	60.62
AT5G57550	Arabidopsis thaliana	2e-124	365	275	62.18
AT5G57560	Arabidopsis thaliana	6e-124	363	296	58.11
OS06G48200	Oryza sativa	9e-122	358	291	57.39
AT4G30270	Arabidopsis thaliana	6e-120	353	276	60.14
AT3G23730	Arabidopsis thaliana	5e-119	351	305	57.38
OS06G48180	Oryza sativa	5e-117	346	295	55.25
ATR_00065G01750	Amborella trichopoda	8e-117	346	290	57.59
AT2G18800	Arabidopsis thaliana	9e-117	346	296	57.77
OS06G48160	Oryza sativa	3e-116	344	314	53.18
AT4G14130	Arabidopsis thaliana	7e-116	343	301	56.15
AT5G57530	Arabidopsis thaliana	5e-115	341	277	58.84
AT5G57540	Arabidopsis thaliana	1e-114	340	277	58.12
ATR_00065G01770	Amborella trichopoda	6e-113	336	288	56.60
AT5G48070	Arabidopsis thaliana	9e-111	330	302	52.32
AT4G25820	Arabidopsis thaliana	2e-110	329	286	56.29
OS04G51520	Oryza sativa	2e-101	308	298	48.32
OS04G51460	Oryza sativa	1e-100	304	310	48.06
AT4G30280	Arabidopsis thaliana	3e-99	301	299	51.84
AT4G30290	Arabidopsis thaliana	4e-99	300	277	54.51
OS06G48170	Oryza sativa	2e-98	299	282	47.87
AT1G65310	Arabidopsis thaliana	4e-98	298	277	53.43
ATR_00062G00060	Amborella trichopoda	3e-96	290	193	71.50
ATR_00016G02940	Amborella trichopoda	1e-93	286	277	50.90
AT4G03210	Arabidopsis thaliana	1e-93	286	291	49.83
PP00309G00230	Physcomitrella patens	5e-91	280	307	46.91
OS08G14210	Oryza sativa	1e-90	281	272	48.53
AT5G13870	Arabidopsis thaliana	2e-90	278	301	47.84
PP00168G00160	Physcomitrella patens	3e-90	278	301	47.84
ATR_00019G03550	Amborella trichopoda	5e-90	277	297	48.15
OS11G33270	Oryza sativa	5e-90	277	277	49.46
ATR_00026G01160	Amborella trichopoda	7e-90	276	303	45.54
AT4G28850	Arabidopsis thaliana	2e-89	276	297	48.15
OS04G51450	Oryza sativa	6e-89	275	261	50.96
PP00309G00220	Physcomitrella patens	7e-88	273	265	50.19
PP00168G00050	Physcomitrella patens	3e-87	271	298	46.64
AT2G06850	Arabidopsis thaliana	3e-87	270	271	50.18
AT5G65730	Arabidopsis thaliana	9e-87	269	298	43.96
OS08G14200	Oryza sativa	2e-86	268	285	46.67
ATR_00453G00010	Amborella trichopoda	2e-85	267	306	43.79
AT4G37800	Arabidopsis thaliana	3e-85	265	298	43.96
OS08G13920	Oryza sativa	8e-85	264	278	45.68
PP00004G00260	Physcomitrella patens	1e-84	264	264	49.24
PP00026G00650	Physcomitrella patens	5e-84	262	266	49.62
PP00004G00240	Physcomitrella patens	8e-83	259	272	48.53
ATR_00026G01070	Amborella trichopoda	1e-81	255	282	46.45
AT2G14620	Arabidopsis thaliana	2e-81	255	308	41.88
AT1G11545	Arabidopsis thaliana	3e-80	253	301	44.19
PP00195G00150	Physcomitrella patens	5e-80	252	308	43.83
PP00272G00150	Physcomitrella patens	2e-79	249	270	47.04
PP00309G00140	Physcomitrella patens	8e-77	244	303	43.23
OS07G34580	Oryza sativa	2e-76	243	312	40.38
ATR_00004G02430	Amborella trichopoda	6e-76	241	279	42.65
ATR_00109G01360	Amborella trichopoda	7e-76	238	201	55.22
AT4G13090	Arabidopsis thaliana	8e-76	241	277	45.13
PP00291G00470	Physcomitrella patens	1e-74	238	303	41.58
PP00193G00050	Physcomitrella patens	9e-74	237	266	43.61
OS08G13980	Oryza sativa	2e-73	235	284	42.96
ATR_00026G01110	Amborella trichopoda	4e-73	231	230	48.70
PP00618G00010	Physcomitrella patens	2e-72	236	308	40.26
OS02G17900	Oryza sativa	2e-72	232	283	41.70
AT4G13080	Arabidopsis thaliana	3e-72	231	284	44.01
OS06G22919	Oryza sativa	8e-71	228	302	39.74
OS02G17880	Oryza sativa	2e-70	227	286	41.61
AT3G25050	Arabidopsis thaliana	1e-69	224	306	40.85
ATR_00026G01130	Amborella trichopoda	1e-68	219	200	53.00
ATR_00019G03580	Amborella trichopoda	2e-64	207	170	60.00
PP00213G00650	Physcomitrella patens	4e-64	211	268	42.54
PP00156G00440	Physcomitrella patens	8e-60	199	297	38.38
PP00156G00420	Physcomitrella patens	8e-60	199	297	38.38
PP00309G00200	Physcomitrella patens	5e-59	195	245	43.27
OS06G13040	Oryza sativa	6e-59	197	281	39.15
PP00011G01530	Physcomitrella patens	3e-58	196	271	41.70
OS04G51510	Oryza sativa	5e-58	194	282	37.94
PP00019G00220	Physcomitrella patens	7e-57	192	265	38.87
PP00410G00130	Physcomitrella patens	1e-56	191	306	37.91
PP00122G00290	Physcomitrella patens	2e-55	188	300	37.00
PP00486G00100	Physcomitrella patens	4e-54	184	255	41.57
PP00486G00080	Physcomitrella patens	4e-54	184	255	41.57
PP00081G01240	Physcomitrella patens	1e-53	183	258	41.09
AT2G36870	Arabidopsis thaliana	2e-52	180	270	37.04
ATR_00013G00910	Amborella trichopoda	2e-51	175	240	38.33
ATR_00082G00420	Amborella trichopoda	2e-51	177	271	38.75
ATR_00026G01150	Amborella trichopoda	2e-51	173	159	50.94
OS10G39840	Oryza sativa	4e-51	177	279	35.13
OS10G02770	Oryza sativa	5e-51	178	287	34.49
AT3G44990	Arabidopsis thaliana	6e-51	176	269	36.06
PP00005G00910	Physcomitrella patens	9e-51	179	268	35.82
OS07G29750	Oryza sativa	1e-50	176	269	34.57
ATR_00337G00020	Amborella trichopoda	2e-50	169	115	73.04
PP00074G00080	Physcomitrella patens	2e-50	178	276	38.41
AT1G32170	Arabidopsis thaliana	3e-50	176	258	36.82
PP00048G00500	Physcomitrella patens	3e-50	175	286	36.71
ATR_00024G00080	Amborella trichopoda	1e-47	169	271	35.06
OS03G01800	Oryza sativa	5e-47	166	278	33.81
PP00141G00620	Physcomitrella patens	1e-46	165	255	38.04
AT1G10550	Arabidopsis thaliana	4e-46	164	267	34.46
OS09G23220	Oryza sativa	6e-45	161	287	32.40
OS03G13570	Oryza sativa	2e-44	160	287	34.15
PP00089G00910	Physcomitrella patens	3e-44	159	258	37.21
OS02G57770	Oryza sativa	5e-44	159	288	33.68
AT1G14720	Arabidopsis thaliana	6e-44	159	268	34.70
PP00346G00070	Physcomitrella patens	3e-43	158	287	34.84
AT2G01850	Arabidopsis thaliana	1e-42	155	278	32.73
AT3G48580	Arabidopsis thaliana	2e-42	153	275	35.27
ATR_00062G00010	Amborella trichopoda	9e-42	149	101	75.25
AT4G18990	Arabidopsis thaliana	3e-41	152	269	33.46
OS02G03550	Oryza sativa	7e-41	150	265	33.21
OS03G63760	Oryza sativa	1e-40	150	290	32.07
ATR_00048G00580	Amborella trichopoda	4e-38	142	237	34.18
OS02G46910	Oryza sativa	5e-35	135	310	30.65
PP00089G00960	Physcomitrella patens	2e-34	131	171	41.52
ATR_00062G00030	Amborella trichopoda	5e-34	125	103	64.08
OS10G42670	Oryza sativa	3e-33	130	263	32.32
ATR_00055G01550	Amborella trichopoda	9e-19	84.7	113	41.59
ATR_00069G00950	Amborella trichopoda	2e-18	85.9	192	29.17
PP00002G02710	Physcomitrella patens	4e-18	81.6	93	46.24
PP00353G00180	Physcomitrella patens	2e-16	80.9	143	33.57
ATR_00065G01730	Amborella trichopoda	5e-16	75.9	56	60.71
ATR_01729G00020	Amborella trichopoda	1e-15	75.1	64	48.44
ATR_00004G02620	Amborella trichopoda	2e-15	75.1	70	44.29
PP00024G01140	Physcomitrella patens	4e-15	79.7	185	32.43
OS03G02610	Oryza sativa	5e-15	77.8	167	33.53
PP00037G01500	Physcomitrella patens	8e-13	72.8	188	26.06
YLR213C	Saccharomyces cerevisiae strain S288C	1e-11	68.9	226	27.43
OS04G53950	Oryza sativa	7e-10	63.2	69	43.48
ATR_00065G01780	Amborella trichopoda	8e-09	56.6	88	30.68
YGR189C	Saccharomyces cerevisiae strain S288C	2e-07	55.8	168	30.95

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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