Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00008G02130	Amborella trichopoda	4e-163	456	220	100.00
ATR_00006G00140	Amborella trichopoda	6e-76	235	202	63.37
ATR_00008G02090	Amborella trichopoda	1e-70	218	127	85.83
ATR_00008G02110	Amborella trichopoda	2e-48	162	99	78.79
ATR_00038G00200	Amborella trichopoda	1e-30	119	150	45.33
PP00137G00580	Physcomitrella patens	1e-29	116	150	43.33
AT5G65430	Arabidopsis thaliana	2e-29	115	150	40.00
AT5G38480	Arabidopsis thaliana	3e-29	115	150	43.33
OS02G36974	Oryza sativa	3e-29	115	150	42.00
OS08G33370	Oryza sativa	3e-29	115	150	42.67
ATR_00008G02120	Amborella trichopoda	4e-29	110	90	64.44
ENSMUSG00000018326	Mus musculus	6e-29	114	147	41.50
AT3G02520	Arabidopsis thaliana	6e-29	114	150	42.00
AT5G16050	Arabidopsis thaliana	7e-29	114	149	41.61
FC007G03020	Fragilariopsis cylindrus	1e-28	113	200	35.50
phs201970	Phytophtora sojae	1e-28	113	206	35.44
gsu62950	Galdieria sulphuraria	1e-28	114	149	40.27
OS04G38870	Oryza sativa	1e-28	114	149	40.94
SPAC8E11.02c	Schizosaccharomyces pombe	1e-28	114	149	40.94
PTI_16G00710	Phaeodactylum tricornutum	1e-28	113	146	41.10
ATR_00135G00260	Amborella trichopoda	1e-28	113	150	40.67
PP00073G00560	Physcomitrella patens	2e-28	113	149	40.94
OS11G34450	Oryza sativa	4e-28	112	152	44.08
gsu56600	Galdieria sulphuraria	4e-28	112	150	40.67
PP00073G00440	Physcomitrella patens	4e-28	112	150	41.33
ES0175G00030	Ectocarpus siliculosus	5e-28	112	146	40.41
AT5G10450	Arabidopsis thaliana	7e-28	112	150	38.00
AT1G78300	Arabidopsis thaliana	1e-27	110	150	42.00
PP00137G00700	Physcomitrella patens	2e-27	110	149	40.27
ENSMUSG00000047281	Mus musculus	3e-27	109	151	40.40
ENSG00000175793	Homo sapiens	3e-27	109	151	40.40
AA0114G00030	Aureococcus anophagefferens	3e-27	109	156	37.18
WBGene00001502	Caenorhabditis elegans	4e-27	109	147	38.10
AT1G35160	Arabidopsis thaliana	6e-27	109	150	40.67
OS03G50290	Oryza sativa	7e-27	108	149	41.61
DDB_G0269138	Dictyostelium discoideum	7e-27	108	150	40.67
PP00201G00130	Physcomitrella patens	7e-27	108	149	38.93
ENSMUSG00000022285	Mus musculus	7e-27	108	147	40.14
ENSG00000164924	Homo sapiens	8e-27	108	155	40.00
AT4G09000	Arabidopsis thaliana	8e-27	109	150	40.00
ENSG00000134308	Homo sapiens	9e-27	108	147	40.82
PP00140G00180	Physcomitrella patens	1e-26	108	149	40.27
PP00067G00780	Physcomitrella patens	1e-26	108	149	38.26
TP03G01060	Thalassiosira pseudonana	1e-26	107	199	35.18
AT1G26480	Arabidopsis thaliana	2e-26	108	149	38.26
YDR099W	Saccharomyces cerevisiae strain S288C	2e-26	108	150	39.33
ENSMUSG00000076432	Mus musculus	2e-26	108	147	40.82
WBGene00003920	Caenorhabditis elegans	2e-26	107	147	38.78
YER177W	Saccharomyces cerevisiae strain S288C	3e-26	107	160	38.12
PP00046G00510	Physcomitrella patens	3e-26	107	149	38.26
FBgn0004907	Drosophila melanogaster	3e-26	107	188	35.64
ES0049G00480	Ectocarpus siliculosus	5e-26	106	189	33.86
ENSG00000108953	Homo sapiens	7e-26	106	149	39.60
ENSMUSG00000020849	Mus musculus	7e-26	106	149	39.60
PP00348G00040	Physcomitrella patens	9e-26	105	149	37.58
PP00140G00200	Physcomitrella patens	9e-26	105	151	43.71
CM16G02410	Cyanidioschyzon merolae	1e-25	105	149	38.93
PP00348G00030	Physcomitrella patens	1e-25	104	143	37.06
ATR_00038G01460	Amborella trichopoda	1e-25	105	149	38.26
Naga_100026g40	Nannochloropsis gaditana	1e-25	105	190	34.74
SPAC17A2.13c	Schizosaccharomyces pombe	2e-25	105	152	39.47
RCC4223.19g00240	Picochlorum_RCC4223	3e-25	104	149	40.27
PI00G01860	Picochlorum sp. SENEW3 (SE3)	3e-25	104	149	40.27
ccr192240	Chondrus crispus	3e-25	104	159	40.25
AA0012G00890	Aureococcus anophagefferens	5e-25	103	142	39.44
FBgn0020238	Drosophila melanogaster	7e-25	103	149	38.26
CNC64A_014G02140	Chlorella sp NC64A	8e-25	103	150	40.67
VC00G20730	Volvox carteri	1e-24	102	150	40.67
CR12G13050	Chlamydomonas reinhardtii	2e-24	102	150	40.67
ATR_00110G00970	Amborella trichopoda	2e-24	102	149	37.58
CV00G03610	Coccomyxa subellipsoidea C-169	2e-24	102	150	40.67
OS01G11110	Oryza sativa	4e-24	100	151	37.75
HE0000G29150	Helicosporidium sp.	8e-24	100	149	36.91
AT1G34760	Arabidopsis thaliana	1e-23	99.8	149	38.26
ENSG00000170027	Homo sapiens	1e-23	99.8	195	33.85
VC00G73830	Volvox carteri	3e-23	99.0	140	42.86
ATR_00008G02000	Amborella trichopoda	3e-23	99.0	165	38.79
ccr101920	Chondrus crispus	4e-23	98.6	195	35.90
MP17G00870	Micromonas pusilla strain CCMP1545	1e-22	97.4	151	37.75
gsu14370	Galdieria sulphuraria	1e-22	97.4	149	35.57
ENSG00000128245	Homo sapiens	1e-22	97.1	192	33.85
MRCC299_03G06740	Micromonas sp RCC299	1e-22	97.1	151	37.09
AT2G42590	Arabidopsis thaliana	2e-22	97.1	149	36.91
OM_18G01200	Ostreococcus mediterraneus	2e-22	96.7	151	37.75
ENSMUSG00000018965	Mus musculus	4e-22	95.9	192	33.85
pte712520	Paramecium tetraurelia	6e-22	95.1	189	32.80
pte593080	Paramecium tetraurelia	6e-22	95.1	189	32.80
OS08G37490	Oryza sativa	1e-21	94.7	149	38.26
OT_18G00970	Ostreococcus tauri	1e-21	94.4	151	36.42
pte382540	Paramecium tetraurelia	2e-21	93.2	200	31.00
AT1G22300	Arabidopsis thaliana	3e-21	93.2	149	35.57
MRCC299_04G04590	Micromonas sp RCC299	4e-21	92.8	154	35.71
pte251710	Paramecium tetraurelia	4e-21	92.8	189	32.28
ORCC809_17G00990	Ostreococcus sp RCC809	1e-20	92.0	151	35.76
pte437900	Paramecium tetraurelia	1e-20	91.7	152	35.53
OL17G00990	Ostreococcus lucimarinus	2e-20	90.9	151	35.76
emh640060	Emiliania huxleyi	4e-20	90.1	153	39.22
BPRRCC1105_06G01690	Bathycoccus prasinos	2e-19	89.0	157	36.94
MP05G03550	Micromonas pusilla strain CCMP1545	3e-19	87.8	165	35.76
CR06G02090	Chlamydomonas reinhardtii	8e-19	86.3	149	40.27
emh577110	Emiliania huxleyi	1e-18	85.5	189	34.92
emh227500	Emiliania huxleyi	1e-18	85.5	189	34.92
AT1G78220	Arabidopsis thaliana	6e-18	83.6	148	32.43
OM_17G00380	Ostreococcus mediterraneus	1e-17	83.2	155	33.55
pte442890	Paramecium tetraurelia	1e-15	77.0	149	32.21
BPRRCC1105_09G01130	Bathycoccus prasinos	2e-15	76.3	162	33.95
pte253910	Paramecium tetraurelia	8e-15	74.3	149	32.21
OL16G00330	Ostreococcus lucimarinus	1e-14	74.3	155	32.26
pte687770	Paramecium tetraurelia	2e-14	73.6	149	31.54
pte762160	Paramecium tetraurelia	2e-14	75.5	149	32.21
ORCC809_16G02320	Ostreococcus sp RCC809	2e-13	70.5	155	30.97
emh397860	Emiliania huxleyi	1e-12	68.6	149	32.89
emh533080	Emiliania huxleyi	1e-12	68.6	149	32.89
ATR_00008G02080	Amborella trichopoda	6e-12	63.2	73	53.42
pte478200	Paramecium tetraurelia	2e-11	64.7	152	26.32
ATR_00090G00550	Amborella trichopoda	3e-11	64.7	141	31.91
ATR_00008G00860	Amborella trichopoda	8e-11	60.8	53	52.83
OS11G39540	Oryza sativa	3e-10	61.2	95	32.63
pte44220	Paramecium tetraurelia	7e-10	61.6	155	29.68
pte69630	Paramecium tetraurelia	1e-09	60.1	160	30.00
OM_08G00660	Ostreococcus mediterraneus	6e-09	58.5	152	28.95
ATR_00349G00030	Amborella trichopoda	6e-09	58.5	120	34.17
BPRRCC1105_04G00680	Bathycoccus prasinos	3e-07	53.9	84	33.33
OL08G00660	Ostreococcus lucimarinus	3e-06	50.4	153	28.10
AT1G22290	Arabidopsis thaliana	3e-06	50.1	172	27.33
ATR_00073G00340	Amborella trichopoda	4e-06	50.4	138	28.26
WBGene00010919	Caenorhabditis elegans	1e-05	47.4	72	36.11

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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