Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00008G02110	Amborella trichopoda	7e-109	313	155	100.00
ATR_00006G00140	Amborella trichopoda	1e-70	219	123	83.74
ATR_00008G02130	Amborella trichopoda	2e-48	162	99	78.79
ATR_00038G00200	Amborella trichopoda	3e-33	124	138	44.93
PP00137G00580	Physcomitrella patens	1e-32	122	140	42.86
PP00137G00700	Physcomitrella patens	2e-32	121	139	41.73
PP00073G00440	Physcomitrella patens	5e-32	120	140	42.14
PP00073G00560	Physcomitrella patens	7e-32	120	139	41.01
ATR_00008G02100	Amborella trichopoda	8e-32	114	63	84.13
OS08G33370	Oryza sativa	1e-31	119	138	41.30
PP00140G00200	Physcomitrella patens	1e-31	119	139	43.17
OS04G38870	Oryza sativa	2e-31	119	144	39.58
OS03G50290	Oryza sativa	3e-31	118	137	42.34
OS02G36974	Oryza sativa	4e-31	118	138	40.58
AT5G38480	Arabidopsis thaliana	6e-31	117	136	44.12
AT3G02520	Arabidopsis thaliana	2e-30	116	138	41.30
ATR_00008G02090	Amborella trichopoda	1e-28	108	62	83.87
AT1G78300	Arabidopsis thaliana	3e-28	110	140	40.00
PP00140G00180	Physcomitrella patens	3e-28	110	139	39.57
ATR_00135G00260	Amborella trichopoda	6e-28	109	136	37.50
AT5G16050	Arabidopsis thaliana	7e-28	109	137	41.61
ES0175G00030	Ectocarpus siliculosus	4e-27	107	136	38.97
AT1G35160	Arabidopsis thaliana	5e-27	107	149	37.58
AT5G65430	Arabidopsis thaliana	6e-27	107	141	37.59
VC00G73830	Volvox carteri	2e-26	105	139	39.57
AT4G09000	Arabidopsis thaliana	3e-26	106	140	37.14
gsu62950	Galdieria sulphuraria	3e-26	105	144	38.89
OT_18G00970	Ostreococcus tauri	4e-26	105	141	36.88
AT5G10450	Arabidopsis thaliana	4e-26	105	143	35.66
SPAC8E11.02c	Schizosaccharomyces pombe	6e-26	104	139	38.13
OM_18G01200	Ostreococcus mediterraneus	8e-26	103	138	37.68
HE0000G29150	Helicosporidium sp.	2e-25	102	138	36.23
OS11G34450	Oryza sativa	2e-25	102	143	39.16
YDR099W	Saccharomyces cerevisiae strain S288C	3e-25	102	141	35.46
YER177W	Saccharomyces cerevisiae strain S288C	3e-25	102	140	35.71
gsu56600	Galdieria sulphuraria	5e-25	102	144	38.89
SPAC17A2.13c	Schizosaccharomyces pombe	8e-25	101	139	35.97
AA0012G00890	Aureococcus anophagefferens	9e-25	100	138	37.68
RCC4223.19g00240	Picochlorum_RCC4223	1e-24	100	136	38.24
ccr192240	Chondrus crispus	1e-24	100	139	38.13
PI00G01860	Picochlorum sp. SENEW3 (SE3)	1e-24	100	136	38.24
VC00G20730	Volvox carteri	1e-24	100	137	38.69
ENSG00000134308	Homo sapiens	1e-24	100	125	41.60
CR12G13050	Chlamydomonas reinhardtii	1e-24	100	137	38.69
CM16G02410	Cyanidioschyzon merolae	2e-24	100	141	37.59
Naga_100026g40	Nannochloropsis gaditana	2e-24	100	138	37.68
CV00G03610	Coccomyxa subellipsoidea C-169	2e-24	100	137	38.69
MRCC299_03G06740	Micromonas sp RCC299	3e-24	99.8	144	36.81
ENSMUSG00000076432	Mus musculus	3e-24	100	125	41.60
MP17G00870	Micromonas pusilla strain CCMP1545	3e-24	99.8	145	34.48
CNC64A_014G02140	Chlorella sp NC64A	6e-24	99.0	137	38.69
ATR_00008G02000	Amborella trichopoda	9e-24	98.6	141	40.43
PTI_16G00710	Phaeodactylum tricornutum	1e-23	98.2	132	39.39
phs201970	Phytophtora sojae	1e-23	98.2	135	38.52
FBgn0004907	Drosophila melanogaster	1e-23	97.8	136	38.97
DDB_G0269138	Dictyostelium discoideum	1e-23	97.8	137	40.15
ORCC809_17G00990	Ostreococcus sp RCC809	1e-23	98.2	138	36.96
FC007G03020	Fragilariopsis cylindrus	1e-23	97.8	135	39.26
AT1G26480	Arabidopsis thaliana	1e-23	97.8	138	36.23
ENSMUSG00000018326	Mus musculus	2e-23	97.4	129	39.53
ENSG00000170027	Homo sapiens	2e-23	97.1	140	37.86
CR06G02090	Chlamydomonas reinhardtii	3e-23	96.7	134	37.31
WBGene00001502	Caenorhabditis elegans	3e-23	96.7	138	36.23
PP00201G00130	Physcomitrella patens	3e-23	97.1	136	36.76
PP00067G00780	Physcomitrella patens	5e-23	96.3	136	36.03
FBgn0020238	Drosophila melanogaster	7e-23	95.9	136	38.24
MRCC299_04G04590	Micromonas sp RCC299	8e-23	95.9	133	38.35
WBGene00003920	Caenorhabditis elegans	1e-22	95.1	129	36.43
ENSG00000164924	Homo sapiens	1e-22	95.1	125	39.20
OL17G00990	Ostreococcus lucimarinus	1e-22	95.5	137	36.50
ATR_00110G00970	Amborella trichopoda	1e-22	95.1	137	36.50
PP00046G00510	Physcomitrella patens	2e-22	95.1	136	36.03
PP00348G00030	Physcomitrella patens	3e-22	93.2	137	35.04
ENSMUSG00000022285	Mus musculus	5e-22	93.6	125	38.40
ccr101920	Chondrus crispus	6e-22	93.2	139	40.29
TP03G01060	Thalassiosira pseudonana	7e-22	93.2	132	37.88
AA0114G00030	Aureococcus anophagefferens	9e-22	92.8	133	37.59
PP00348G00040	Physcomitrella patens	1e-21	92.8	136	35.29
gsu14370	Galdieria sulphuraria	2e-21	92.0	143	30.07
ENSG00000108953	Homo sapiens	3e-21	91.3	136	36.76
ENSMUSG00000020849	Mus musculus	3e-21	91.3	136	36.76
ENSMUSG00000047281	Mus musculus	3e-21	91.3	131	35.11
emh640060	Emiliania huxleyi	5e-21	90.5	139	38.13
ATR_00038G01460	Amborella trichopoda	6e-21	90.5	136	35.29
AT1G34760	Arabidopsis thaliana	7e-21	90.5	136	34.56
MP05G03550	Micromonas pusilla strain CCMP1545	1e-20	90.1	139	37.41
ENSG00000175793	Homo sapiens	1e-20	89.7	131	35.11
ENSG00000128245	Homo sapiens	1e-20	89.4	140	35.71
AT1G22300	Arabidopsis thaliana	2e-20	89.4	136	32.35
ENSMUSG00000018965	Mus musculus	2e-20	89.0	140	35.71
AT2G42590	Arabidopsis thaliana	3e-20	89.0	136	34.56
BPRRCC1105_09G01130	Bathycoccus prasinos	3e-20	89.0	122	36.07
pte712520	Paramecium tetraurelia	9e-20	87.0	143	32.17
pte593080	Paramecium tetraurelia	9e-20	87.0	143	32.17
OS08G37490	Oryza sativa	9e-20	87.4	139	34.53
OS01G11110	Oryza sativa	1e-19	86.3	133	35.34
pte251710	Paramecium tetraurelia	3e-19	85.5	138	32.61
OM_17G00380	Ostreococcus mediterraneus	3e-19	85.9	143	34.27
emh577110	Emiliania huxleyi	4e-19	85.5	133	36.84
emh227500	Emiliania huxleyi	4e-19	85.5	133	36.84
pte69630	Paramecium tetraurelia	3e-18	82.8	134	32.84
OL16G00330	Ostreococcus lucimarinus	6e-18	82.0	142	32.39
ES0049G00480	Ectocarpus siliculosus	1e-17	80.9	104	39.42
pte442890	Paramecium tetraurelia	2e-17	80.9	139	33.09
pte687770	Paramecium tetraurelia	6e-17	79.3	139	32.37
pte253910	Paramecium tetraurelia	7e-17	79.0	139	33.09
pte44220	Paramecium tetraurelia	9e-17	80.9	134	32.84
pte437900	Paramecium tetraurelia	1e-16	78.6	164	28.05
OS11G39540	Oryza sativa	1e-16	78.2	136	30.15
pte762160	Paramecium tetraurelia	2e-16	80.1	139	33.09
BPRRCC1105_06G01690	Bathycoccus prasinos	6e-16	76.6	103	40.78
AC00G68670	Asterochloris sp. Cgr-DA1pho v2.0	1e-15	75.1	119	34.45
emh397860	Emiliania huxleyi	2e-14	72.4	150	31.33
emh533080	Emiliania huxleyi	2e-14	72.4	150	31.33
AT1G78220	Arabidopsis thaliana	1e-13	69.7	138	30.43
ORCC809_16G02320	Ostreococcus sp RCC809	5e-13	68.2	135	29.63
pte478200	Paramecium tetraurelia	3e-11	63.2	141	25.53
ATR_00008G00110	Amborella trichopoda	2e-10	60.1	132	32.58
ATR_00090G00550	Amborella trichopoda	2e-10	61.2	100	34.00
pte382540	Paramecium tetraurelia	2e-10	60.1	93	31.18
OL08G00660	Ostreococcus lucimarinus	6e-10	58.9	142	31.69
AP00G15100	Auxenochlorella protothecoides	9e-10	56.6	70	37.14
ATR_00008G00860	Amborella trichopoda	2e-09	56.2	52	48.08
ATR_00349G00030	Amborella trichopoda	1e-08	56.6	123	31.71
pte353230	Paramecium tetraurelia	2e-07	50.4	82	34.15
AT1G22290	Arabidopsis thaliana	1e-06	49.7	92	28.26
ATR_00073G00340	Amborella trichopoda	3e-06	49.3	101	30.69
OM_08G00660	Ostreococcus mediterraneus	9e-06	47.8	101	31.68

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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