Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00008G02080	Amborella trichopoda	2e-47	151	75	100.00
ATR_00008G02120	Amborella trichopoda	1e-15	70.9	59	69.49
ATR_00008G02130	Amborella trichopoda	2e-12	63.2	73	53.42
ATR_00008G02090	Amborella trichopoda	4e-11	58.9	36	80.56
AT5G65430	Arabidopsis thaliana	1e-09	56.6	75	40.00
ATR_00135G00260	Amborella trichopoda	2e-09	55.8	75	40.00
OS08G37490	Oryza sativa	3e-09	55.1	75	42.67
AT5G16050	Arabidopsis thaliana	3e-09	55.5	75	41.33
PP00137G00580	Physcomitrella patens	4e-09	55.1	75	42.67
OS02G36974	Oryza sativa	5e-09	54.7	75	42.67
OS04G38870	Oryza sativa	5e-09	54.7	75	42.67
phs201970	Phytophtora sojae	6e-09	54.3	75	42.67
ATR_00038G00200	Amborella trichopoda	6e-09	54.7	75	42.67
CM16G02410	Cyanidioschyzon merolae	7e-09	54.3	75	42.67
SPAC8E11.02c	Schizosaccharomyces pombe	8e-09	54.3	74	43.24
ENSG00000164924	Homo sapiens	9e-09	53.9	73	41.10
ENSMUSG00000022285	Mus musculus	1e-08	53.5	73	41.10
AT5G10450	Arabidopsis thaliana	1e-08	53.5	74	39.19
FBgn0004907	Drosophila melanogaster	1e-08	53.1	74	39.19
AT1G78300	Arabidopsis thaliana	2e-08	53.5	74	43.24
OS08G33370	Oryza sativa	2e-08	53.1	75	41.33
AT1G35160	Arabidopsis thaliana	2e-08	53.5	74	43.24
PP00073G00440	Physcomitrella patens	2e-08	53.1	75	41.33
PP00073G00560	Physcomitrella patens	2e-08	53.1	75	41.33
AT5G38480	Arabidopsis thaliana	2e-08	53.1	74	41.89
OS11G34450	Oryza sativa	2e-08	53.1	75	41.33
AC00G68670	Asterochloris sp. Cgr-DA1pho v2.0	2e-08	52.4	75	40.00
ENSG00000134308	Homo sapiens	2e-08	52.8	73	41.10
ccr192240	Chondrus crispus	3e-08	52.8	75	40.00
ENSMUSG00000047281	Mus musculus	3e-08	52.4	73	41.10
ENSMUSG00000018326	Mus musculus	3e-08	52.4	73	39.73
CR12G13050	Chlamydomonas reinhardtii	3e-08	52.4	75	40.00
VC00G20730	Volvox carteri	3e-08	52.4	75	40.00
OM_18G01200	Ostreococcus mediterraneus	3e-08	52.4	74	40.54
ATR_00038G01460	Amborella trichopoda	3e-08	52.4	73	41.10
SPAC17A2.13c	Schizosaccharomyces pombe	4e-08	52.4	75	41.33
PP00140G00180	Physcomitrella patens	4e-08	52.0	75	40.00
ENSG00000175793	Homo sapiens	4e-08	52.0	73	41.10
WBGene00003920	Caenorhabditis elegans	4e-08	52.0	73	38.36
AT4G09000	Arabidopsis thaliana	4e-08	52.8	74	41.89
pte382540	Paramecium tetraurelia	5e-08	51.6	74	36.49
PP00046G00510	Physcomitrella patens	5e-08	52.0	75	40.00
CNC64A_014G02140	Chlorella sp NC64A	5e-08	52.0	75	40.00
AT3G02520	Arabidopsis thaliana	5e-08	52.0	75	40.00
CV00G03610	Coccomyxa subellipsoidea C-169	5e-08	52.0	75	40.00
ENSMUSG00000076432	Mus musculus	5e-08	52.4	73	41.10
PP00201G00130	Physcomitrella patens	6e-08	51.6	75	40.00
ENSG00000108953	Homo sapiens	6e-08	51.6	75	41.33
ENSMUSG00000020849	Mus musculus	6e-08	51.6	75	41.33
pte353250	Paramecium tetraurelia	6e-08	50.1	74	35.14
AT2G42590	Arabidopsis thaliana	6e-08	52.0	74	39.19
AT1G34760	Arabidopsis thaliana	7e-08	51.6	73	42.47
pte712520	Paramecium tetraurelia	7e-08	51.2	74	36.49
pte593080	Paramecium tetraurelia	7e-08	51.2	74	36.49
DDB_G0269138	Dictyostelium discoideum	7e-08	51.6	75	41.33
PP00348G00040	Physcomitrella patens	8e-08	51.2	73	41.10
pte251710	Paramecium tetraurelia	9e-08	51.2	73	36.99
WBGene00001502	Caenorhabditis elegans	9e-08	51.2	73	38.36
PP00067G00780	Physcomitrella patens	9e-08	51.2	73	41.10
RCC4223.19g00240	Picochlorum_RCC4223	9e-08	51.2	75	38.67
PP00137G00700	Physcomitrella patens	1e-07	51.2	75	40.00
PI00G01860	Picochlorum sp. SENEW3 (SE3)	1e-07	50.8	75	38.67
AT1G22300	Arabidopsis thaliana	1e-07	50.8	72	40.28
ENSG00000128245	Homo sapiens	1e-07	50.4	73	36.99
PTI_16G00710	Phaeodactylum tricornutum	2e-07	50.1	74	37.84
ENSMUSG00000018965	Mus musculus	2e-07	50.1	72	37.50
OT_18G00970	Ostreococcus tauri	3e-07	50.1	74	39.19
MP17G00870	Micromonas pusilla strain CCMP1545	3e-07	50.1	73	39.73
gsu56600	Galdieria sulphuraria	3e-07	50.1	73	39.73
pte437900	Paramecium tetraurelia	3e-07	50.1	74	35.14
MRCC299_03G06740	Micromonas sp RCC299	3e-07	50.1	73	39.73
FC007G03020	Fragilariopsis cylindrus	3e-07	49.7	74	36.49
FBgn0020238	Drosophila melanogaster	3e-07	49.7	75	40.00
ORCC809_17G00990	Ostreococcus sp RCC809	5e-07	49.3	74	39.19
OL17G00990	Ostreococcus lucimarinus	6e-07	48.9	74	39.19
TP03G01060	Thalassiosira pseudonana	6e-07	48.9	74	37.84
CR06G02090	Chlamydomonas reinhardtii	6e-07	48.9	73	38.36
ES0175G00030	Ectocarpus siliculosus	7e-07	48.5	73	39.73
MRCC299_04G04590	Micromonas sp RCC299	7e-07	48.5	74	39.19
YER177W	Saccharomyces cerevisiae strain S288C	8e-07	48.5	73	39.73
AA0012G00890	Aureococcus anophagefferens	8e-07	48.5	73	38.36
Naga_100026g40	Nannochloropsis gaditana	9e-07	48.5	73	39.73
AA0114G00030	Aureococcus anophagefferens	9e-07	48.5	73	38.36
YDR099W	Saccharomyces cerevisiae strain S288C	9e-07	48.5	73	39.73
MP05G03550	Micromonas pusilla strain CCMP1545	9e-07	48.5	72	37.50
gsu62950	Galdieria sulphuraria	1e-06	48.5	73	38.36
AT1G26480	Arabidopsis thaliana	1e-06	48.5	73	39.73
ES0049G00480	Ectocarpus siliculosus	1e-06	48.1	73	36.99
BPRRCC1105_06G01690	Bathycoccus prasinos	1e-06	48.1	72	37.50
VC00G73830	Volvox carteri	2e-06	47.8	73	38.36
ENSG00000170027	Homo sapiens	2e-06	47.4	72	36.11
gsu14370	Galdieria sulphuraria	2e-06	47.4	73	39.73
ATR_00110G00970	Amborella trichopoda	2e-06	47.4	73	38.36
ccr101920	Chondrus crispus	3e-06	47.0	75	37.33
OS03G50290	Oryza sativa	3e-06	47.0	75	38.67

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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