Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
ATR_00006G02240	Amborella trichopoda	2e-160	449	218	100.00
ATR_00035G00470	Amborella trichopoda	3e-106	320	220	73.18
ATR_00035G00260	Amborella trichopoda	2e-96	288	220	68.18
ATR_00035G00400	Amborella trichopoda	6e-46	163	218	43.12
ATR_04066G00010	Amborella trichopoda	3e-42	148	220	40.00
AT5G07860	Arabidopsis thaliana	6e-38	142	217	39.63
AT5G07870	Arabidopsis thaliana	4e-37	140	221	38.01
AT5G42830	Arabidopsis thaliana	1e-36	138	214	39.72
AT5G07850	Arabidopsis thaliana	7e-35	133	210	37.62
AT2G39980	Arabidopsis thaliana	1e-30	122	187	39.04
AT5G01210	Arabidopsis thaliana	5e-30	120	257	29.57
AT5G67150	Arabidopsis thaliana	2e-29	117	214	33.64
OS01G63480	Oryza sativa	2e-27	112	236	33.90
OS08G02020	Oryza sativa	2e-26	110	223	34.53
OS05G37660	Oryza sativa	2e-26	109	240	32.50
AT3G50280	Arabidopsis thaliana	9e-26	107	225	33.78
OS06G01350	Oryza sativa	1e-25	107	223	33.63
AT3G50270	Arabidopsis thaliana	1e-25	107	227	34.80
AT3G50300	Arabidopsis thaliana	3e-25	106	194	36.08
ATR_00029G03400	Amborella trichopoda	3e-25	107	184	35.33
OS08G02030	Oryza sativa	6e-25	105	222	34.23
OS11G13970	Oryza sativa	9e-24	102	224	33.48
OS08G01960	Oryza sativa	4e-22	98.2	221	32.58
OS08G01950	Oryza sativa	1e-21	96.3	214	33.64
OS08G01980	Oryza sativa	2e-21	95.5	225	34.22
OS07G04970	Oryza sativa	7e-21	94.4	220	35.00
AT3G50290	Arabidopsis thaliana	1e-20	91.7	140	35.00
OS08G44840	Oryza sativa	1e-20	93.2	214	32.24
AT5G67160	Arabidopsis thaliana	7e-20	91.3	228	29.82
PP00022G00830	Physcomitrella patens	4e-19	88.6	156	33.97
OS04G30570	Oryza sativa	2e-18	87.4	180	34.44
AT5G38130	Arabidopsis thaliana	5e-18	86.3	210	31.43
ATR_00009G01680	Amborella trichopoda	6e-18	86.3	216	25.93
ATR_04066G00020	Amborella trichopoda	9e-18	84.7	105	46.67
AT5G23940	Arabidopsis thaliana	2e-16	81.6	218	27.52
PP00150G00620	Physcomitrella patens	1e-14	76.3	115	40.87
ATR_00002G04110	Amborella trichopoda	4e-14	74.3	132	35.61
ATR_00019G02930	Amborella trichopoda	6e-14	71.6	135	35.56
PP00097G01170	Physcomitrella patens	1e-13	73.2	151	29.80
ATR_00002G04060	Amborella trichopoda	3e-13	72.0	210	27.62
ATR_00002G04080	Amborella trichopoda	3e-13	71.6	136	29.41
OS09G25460	Oryza sativa	7e-13	70.9	127	32.28
OS03G08720	Oryza sativa	7e-12	67.8	121	34.71
ATR_00002G04090	Amborella trichopoda	2e-11	65.5	125	32.00
PP00275G00350	Physcomitrella patens	2e-11	66.6	126	31.75
AT5G48930	Arabidopsis thaliana	2e-11	66.6	159	30.19
PP00266G00190	Physcomitrella patens	2e-11	66.2	126	30.95
AT2G40230	Arabidopsis thaliana	2e-11	66.2	120	34.17
ATR_00002G04070	Amborella trichopoda	2e-11	66.2	123	34.15
PP00064G00170	Physcomitrella patens	3e-11	65.9	126	30.16
AT2G19070	Arabidopsis thaliana	3e-11	65.9	145	31.03
ATR_00137G00320	Amborella trichopoda	3e-11	65.9	119	32.77
ATR_00002G04100	Amborella trichopoda	4e-11	65.5	125	32.00
PP00465G00160	Physcomitrella patens	4e-11	65.5	224	22.77
ATR_00038G00220	Amborella trichopoda	5e-11	65.1	121	29.75
ATR_00727G00010	Amborella trichopoda	5e-11	64.3	210	25.71
OS03G47860	Oryza sativa	1e-10	63.9	215	28.84
ATR_00058G01950	Amborella trichopoda	2e-10	63.2	131	28.24
ATR_00058G01940	Amborella trichopoda	4e-10	62.4	131	28.24
ATR_04066G00030	Amborella trichopoda	4e-10	58.2	55	45.45
PP00004G00910	Physcomitrella patens	7e-10	61.6	129	32.56
OS10G23310	Oryza sativa	1e-09	61.2	204	25.00
ATR_00038G00270	Amborella trichopoda	1e-09	60.1	121	28.93
OS08G43040	Oryza sativa	2e-09	60.5	127	28.35
OS09G37200	Oryza sativa	2e-09	60.5	118	34.75
AT5G41040	Arabidopsis thaliana	5e-09	59.3	142	32.39
ATR_00047G00390	Amborella trichopoda	1e-08	58.2	131	29.77
OS09G37180	Oryza sativa	1e-08	58.2	161	31.06
OS04G42250	Oryza sativa	1e-08	58.2	156	28.85
ATR_00016G01840	Amborella trichopoda	1e-08	57.8	135	31.85
ATR_00063G00490	Amborella trichopoda	2e-08	57.4	68	42.65
OS02G39850	Oryza sativa	4e-08	56.2	211	25.59
ATR_00058G01960	Amborella trichopoda	7e-08	55.8	126	27.78
PP00054G01450	Physcomitrella patens	8e-08	55.5	128	27.34
OS10G23820	Oryza sativa	2e-07	54.3	204	23.53
OS04G56910	Oryza sativa	4e-07	53.5	117	30.77
ATR_00002G04130	Amborella trichopoda	6e-07	53.1	110	28.18
OS06G49660	Oryza sativa	9e-07	52.4	115	32.17
ATR_00038G00230	Amborella trichopoda	1e-06	50.1	80	30.00
AT1G27620	Arabidopsis thaliana	1e-06	52.0	92	29.35
ATR_00014G00500	Amborella trichopoda	2e-06	51.6	114	27.19
ATR_00086G01160	Amborella trichopoda	3e-06	50.8	94	32.98
OS08G10420	Oryza sativa	4e-06	50.8	112	31.25
ATR_00025G03470	Amborella trichopoda	5e-06	50.4	140	26.43
AT1G28680	Arabidopsis thaliana	9e-06	49.7	119	28.57

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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