Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT5G67580	Arabidopsis thaliana	0.0	611	300	100.00
AT3G49850	Arabidopsis thaliana	3e-104	313	302	66.23
ATR_00007G01610	Amborella trichopoda	2e-62	207	241	48.13
AT1G49950	Arabidopsis thaliana	3e-56	190	247	44.94
OS01G40670	Oryza sativa	1e-50	175	251	42.63
OS12G41920	Oryza sativa	6e-50	173	244	41.80
PP00001G01530	Physcomitrella patens	1e-36	139	196	42.86
PP00176G00470	Physcomitrella patens	2e-35	136	205	41.46
ATR_00036G00800	Amborella trichopoda	2e-33	129	291	35.05
OS01G51154	Oryza sativa	3e-33	129	217	38.25
AT1G72740	Arabidopsis thaliana	5e-29	117	290	33.79
AT1G17520	Arabidopsis thaliana	3e-28	115	300	34.67
PP00176G00330	Physcomitrella patens	1e-27	110	155	45.81
AC00G65680	Asterochloris sp. Cgr-DA1pho v2.0	3e-16	75.9	60	58.33
OM_08G03750	Ostreococcus mediterraneus	4e-16	79.0	61	60.66
OL13G00710	Ostreococcus lucimarinus	8e-16	77.8	56	64.29
MRCC299_05G00790	Micromonas sp RCC299	1e-15	79.7	56	64.29
ORCC809_13G02330	Ostreococcus sp RCC809	1e-15	77.4	82	53.66
MP03G08610	Micromonas pusilla strain CCMP1545	4e-14	75.9	56	64.29
OT_13G00730	Ostreococcus tauri	4e-14	73.2	54	62.96
CV00G44310	Coccomyxa subellipsoidea C-169	8e-13	71.6	65	55.38
BPRRCC1105_05G03670	Bathycoccus prasinos	3e-11	65.1	50	58.00
OM_05G03440	Ostreococcus mediterraneus	2e-09	60.1	66	43.94
RCC4223.15g01290	Picochlorum_RCC4223	3e-09	61.2	53	54.72
OM_07G01470	Ostreococcus mediterraneus	8e-09	60.1	50	58.00
phs325420	Phytophtora sojae	1e-08	59.3	70	44.29
PI00G48540	Picochlorum sp. SENEW3 (SE3)	2e-08	58.5	53	50.94
ORCC809_06G03180	Ostreococcus sp RCC809	2e-08	57.0	47	53.19
AP00G62620	Auxenochlorella protothecoides	5e-08	57.4	49	55.10
OM_11G03300	Ostreococcus mediterraneus	5e-08	57.8	56	48.21
OT_11G03130	Ostreococcus tauri	6e-08	57.8	56	51.79
PP00072G01020	Physcomitrella patens	8e-08	56.6	66	36.36
PP00053G00620	Physcomitrella patens	9e-08	56.2	66	34.85
CR04G03190	Chlamydomonas reinhardtii	1e-07	57.4	49	55.10
MRCC299_12G00390	Micromonas sp RCC299	1e-07	56.6	49	51.02
VC00G138810	Volvox carteri	2e-07	56.6	49	57.14
MRCC299_10G02540	Micromonas sp RCC299	2e-07	56.6	56	46.43
ORCC809_11G03910	Ostreococcus sp RCC809	2e-07	55.8	49	53.06
OL11G03070	Ostreococcus lucimarinus	2e-07	55.8	49	53.06
AC00G71780	Asterochloris sp. Cgr-DA1pho v2.0	3e-07	55.8	87	40.23
MP14G01740	Micromonas pusilla strain CCMP1545	3e-07	55.5	50	52.00
OT_01G06090	Ostreococcus tauri	4e-07	55.1	52	51.92
PP00226G00020	Physcomitrella patens	6e-07	54.3	52	48.08
PP00966G00010	Physcomitrella patens	6e-07	54.3	52	48.08
PP00176G00020	Physcomitrella patens	6e-07	53.9	52	48.08
PP00074G01150	Physcomitrella patens	7e-07	54.3	55	49.09
OL01G06170	Ostreococcus lucimarinus	7e-07	54.3	63	47.62
ORCC809_01G00630	Ostreococcus sp RCC809	7e-07	53.5	61	45.90
OT_01G04160	Ostreococcus tauri	1e-06	52.4	47	48.94
PP00027G00630	Physcomitrella patens	1e-06	53.1	63	38.10
PP00033G01410	Physcomitrella patens	1e-06	53.1	66	34.85
PP00471G00010	Physcomitrella patens	1e-06	53.1	52	48.08
BPRRCC1105_02G02440	Bathycoccus prasinos	2e-06	53.1	56	53.57
AC00G80790	Asterochloris sp. Cgr-DA1pho v2.0	4e-06	51.6	50	46.00
PP00208G00010	Physcomitrella patens	4e-06	52.0	52	46.15
PP00003G01510	Physcomitrella patens	6e-06	50.8	147	27.89

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment