Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT5G62220	Arabidopsis thaliana	0.0	1075	518	100.00
ATR_00069G02020	Amborella trichopoda	6e-174	511	404	57.43
OS04G48480	Oryza sativa	1e-158	468	471	48.41
OS06G23420	Oryza sativa	3e-147	441	466	48.93
ATR_00039G00600	Amborella trichopoda	1e-107	339	399	43.36
PP00530G00010	Physcomitrella patens	2e-107	339	393	44.02
AT4G13990	Arabidopsis thaliana	1e-104	330	403	42.68
AT2G20370	Arabidopsis thaliana	5e-104	331	392	42.35
OS03G05110	Oryza sativa	1e-103	330	404	40.84
PP00081G01160	Physcomitrella patens	2e-103	327	399	43.36
ATR_00012G01990	Amborella trichopoda	1e-101	325	448	37.28
AT2G32750	Arabidopsis thaliana	2e-101	321	394	39.85
PP00088G00740	Physcomitrella patens	4e-101	321	396	41.16
PP00001G01950	Physcomitrella patens	2e-100	322	434	39.17
PP00530G00030	Physcomitrella patens	2e-100	319	365	44.11
OS03G05070	Oryza sativa	4e-99	315	399	40.10
PP00236G00110	Physcomitrella patens	7e-99	318	416	39.66
AT2G29040	Arabidopsis thaliana	2e-98	319	405	40.25
AT1G63450	Arabidopsis thaliana	5e-98	317	391	38.36
PP00026G00040	Physcomitrella patens	5e-98	317	404	38.61
PP00036G01220	Physcomitrella patens	8e-98	317	433	36.72
OS10G32170	Oryza sativa	3e-97	313	399	41.10
AT1G68470	Arabidopsis thaliana	5e-96	305	411	40.63
OS03G05060	Oryza sativa	4e-95	305	401	39.90
PP00020G00530	Physcomitrella patens	5e-95	305	428	38.08
PP00158G00900	Physcomitrella patens	2e-93	307	396	38.89
PP00047G01370	Physcomitrella patens	3e-93	301	399	37.59
OS10G32160	Oryza sativa	1e-92	301	399	41.10
PP00005G01510	Physcomitrella patens	4e-91	294	428	36.92
AT5G41250	Arabidopsis thaliana	2e-90	294	391	37.08
OS12G38450	Oryza sativa	2e-90	293	419	39.14
PP00512G00020	Physcomitrella patens	3e-90	294	438	37.67
PP00021G00120	Physcomitrella patens	2e-89	301	405	36.79
PP00005G01490	Physcomitrella patens	4e-89	290	393	37.91
AT2G31990	Arabidopsis thaliana	4e-89	288	413	39.47
ATR_00001G00920	Amborella trichopoda	2e-88	291	398	35.93
ATR_00001G00910	Amborella trichopoda	4e-88	290	451	33.92
AT2G32740	Arabidopsis thaliana	2e-86	281	397	37.53
OS10G32080	Oryza sativa	1e-85	280	463	36.93
PP00060G01320	Physcomitrella patens	3e-85	277	402	35.82
OS10G32110	Oryza sativa	9e-85	276	392	41.33
ATR_00068G01830	Amborella trichopoda	2e-83	273	399	37.84
PP00003G01530	Physcomitrella patens	2e-73	249	435	32.64
ATR_00133G00100	Amborella trichopoda	8e-71	239	431	33.18
OS12G12290	Oryza sativa	2e-70	240	499	33.47
AT4G22580	Arabidopsis thaliana	2e-69	235	435	33.79
OS10G40559	Oryza sativa	4e-61	214	412	32.28
PP00001G01650	Physcomitrella patens	3e-54	197	526	27.76
PP01264G00010	Physcomitrella patens	8e-27	109	117	43.59
emh634020	Emiliania huxleyi	3e-18	92.0	342	25.15
ATR_00095G01100	Amborella trichopoda	6e-17	87.4	302	26.82
OS01G59630	Oryza sativa	6e-14	78.2	304	25.99
PP00044G01750	Physcomitrella patens	1e-11	67.0	104	34.62
PP00195G00460	Physcomitrella patens	2e-11	65.5	92	35.87
BPRRCC1105_01G06390	Bathycoccus prasinos	2e-10	67.8	347	24.50
AT5G11130	Arabidopsis thaliana	1e-09	64.3	301	25.58
BPRRCC1105_04G01270	Bathycoccus prasinos	2e-09	63.9	251	26.29
CNC64A_001G06310	Chlorella sp NC64A	3e-09	63.9	384	24.48
AT5G16890	Arabidopsis thaliana	5e-09	62.8	305	24.59
AA0013G01180	Aureococcus anophagefferens	2e-08	61.2	443	21.22
ATR_00062G01920	Amborella trichopoda	2e-08	60.5	365	22.19
CNC64A_011G01900	Chlorella sp NC64A	1e-07	58.2	203	27.59
PP00048G00420	Physcomitrella patens	2e-07	57.8	324	21.91
PP00195G00450	Physcomitrella patens	2e-07	57.0	132	25.76
AT4G32790	Arabidopsis thaliana	2e-07	57.8	305	21.97
VC00G144730	Volvox carteri	1e-06	55.5	399	22.31
PP00169G00450	Physcomitrella patens	1e-06	55.1	315	21.90
VC00G45520	Volvox carteri	1e-06	55.1	258	24.03
AT3G07620	Arabidopsis thaliana	4e-06	53.1	254	25.59
AT5G03795	Arabidopsis thaliana	5e-06	53.1	304	24.67
ATR_00005G01690	Amborella trichopoda	6e-06	52.4	332	23.80

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment