Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT5G59430	Arabidopsis thaliana	0.0	1200	579	100.00
AT3G46590	Arabidopsis thaliana	0.0	608	581	60.76
AT1G07540	Arabidopsis thaliana	2e-100	324	442	47.51
AT3G12560	Arabidopsis thaliana	3e-97	316	621	39.77
OS03G16700	Oryza sativa	1e-90	300	560	40.54
AT5G13820	Arabidopsis thaliana	1e-85	285	421	43.94
ATR_00012G02050	Amborella trichopoda	2e-81	273	617	37.28
OS02G57270	Oryza sativa	1e-75	259	439	41.00
ATR_00009G00500	Amborella trichopoda	2e-68	241	454	38.55
AT3G53790	Arabidopsis thaliana	3e-60	210	271	44.65
PP00098G00050	Physcomitrella patens	3e-43	158	92	79.35
PP00132G00360	Physcomitrella patens	4e-42	159	93	77.42
OT_03G00850	Ostreococcus tauri	2e-11	70.5	99	37.37
OL03G00840	Ostreococcus lucimarinus	5e-11	69.3	78	43.59
ORCC809_03G02170	Ostreococcus sp RCC809	6e-11	68.9	78	43.59
OM_09G00940	Ostreococcus mediterraneus	7e-11	68.9	78	43.59
MRCC299_16G00250	Micromonas sp RCC299	9e-11	66.6	101	37.62
CV00G45040	Coccomyxa subellipsoidea C-169	1e-10	67.8	85	43.53
AC00G69690	Asterochloris sp. Cgr-DA1pho v2.0	2e-10	65.9	85	42.35
AC00G69700	Asterochloris sp. Cgr-DA1pho v2.0	2e-10	65.9	85	42.35
MRCC299_01G02000	Micromonas sp RCC299	2e-10	67.0	90	38.89
OT_15G00740	Ostreococcus tauri	3e-10	67.0	154	29.22
AT1G17460	Arabidopsis thaliana	4e-10	66.6	58	46.55
BPRRCC1105_05G04430	Bathycoccus prasinos	5e-10	67.0	93	36.56
BPRRCC1105_06G02260	Bathycoccus prasinos	7e-10	65.9	100	33.00
MP02G04990	Micromonas pusilla strain CCMP1545	2e-09	63.9	87	39.08
OL14G00690	Ostreococcus lucimarinus	3e-09	63.9	74	41.89
PP00165G00360	Physcomitrella patens	5e-09	63.2	87	37.93
PP00043G00700	Physcomitrella patens	6e-09	62.8	87	37.93
BPRRCC1105_02G02440	Bathycoccus prasinos	2e-08	60.8	127	32.28
MP09G05040	Micromonas pusilla strain CCMP1545	4e-08	60.1	73	39.73
ORCC809_14G01100	Ostreococcus sp RCC809	4e-08	60.1	74	39.19
OM_14G02390	Ostreococcus mediterraneus	6e-08	59.7	73	41.10
ATR_00024G02000	Amborella trichopoda	2e-07	58.5	87	35.63
AT1G72650	Arabidopsis thaliana	2e-07	58.2	63	39.68
HE0000G26670	Helicosporidium sp.	7e-07	53.1	82	40.24
OS02G53670	Oryza sativa	1e-06	55.8	95	29.47
ATR_00009G00470	Amborella trichopoda	2e-06	54.7	109	30.28
AT2G37025	Arabidopsis thaliana	3e-06	53.9	96	28.12
OT_03G02160	Ostreococcus tauri	9e-06	51.6	58	44.83

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment