Pico-PLAZA 3.0 : Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT5G57540	Arabidopsis thaliana	0.0	588	285	100.00
AT5G57530	Arabidopsis thaliana	0.0	532	286	92.66
AT4G25820	Arabidopsis thaliana	4e-165	467	287	79.79
AT4G25810	Arabidopsis thaliana	2e-125	367	275	63.27
AT5G57550	Arabidopsis thaliana	7e-125	365	284	60.56
ATR_00019G03570	Amborella trichopoda	1e-123	362	267	63.67
OS06G48200	Oryza sativa	1e-123	362	277	61.73
AT5G57560	Arabidopsis thaliana	1e-120	354	274	61.68
AT3G23730	Arabidopsis thaliana	5e-120	352	279	59.50
AT4G14130	Arabidopsis thaliana	9e-120	352	282	58.87
ATR_00062G00050	Amborella trichopoda	4e-119	350	277	61.37
OS06G48160	Oryza sativa	1e-118	349	290	56.55
ATR_00062G00020	Amborella trichopoda	2e-117	346	280	61.79
ATR_00065G01750	Amborella trichopoda	4e-117	345	288	57.99
OS06G48180	Oryza sativa	3e-116	343	279	55.91
AT4G30270	Arabidopsis thaliana	3e-115	340	267	59.55
ATR_00065G01770	Amborella trichopoda	1e-114	339	287	57.49
ATR_00019G03590	Amborella trichopoda	6e-114	338	291	56.01
AT5G48070	Arabidopsis thaliana	4e-113	335	286	55.24
AT2G18800	Arabidopsis thaliana	1e-108	324	285	54.39
AT4G30290	Arabidopsis thaliana	3e-104	312	278	56.47
AT1G65310	Arabidopsis thaliana	2e-103	310	264	58.71
AT4G30280	Arabidopsis thaliana	4e-102	306	284	54.58
OS04G51520	Oryza sativa	4e-100	303	280	51.79
OS06G48170	Oryza sativa	2e-99	300	266	50.75
OS04G51460	Oryza sativa	7e-98	296	276	49.64
OS11G33270	Oryza sativa	2e-95	290	296	48.99
AT5G13870	Arabidopsis thaliana	2e-94	287	289	51.21
ATR_00016G02940	Amborella trichopoda	2e-93	285	260	53.46
AT5G65730	Arabidopsis thaliana	3e-90	277	277	46.93
OS08G14200	Oryza sativa	4e-90	276	280	49.29
AT4G37800	Arabidopsis thaliana	5e-90	276	293	46.42
AT4G28850	Arabidopsis thaliana	3e-89	274	290	47.24
ATR_00026G01160	Amborella trichopoda	3e-89	274	277	45.49
AT2G06850	Arabidopsis thaliana	6e-89	273	288	48.96
OS08G14210	Oryza sativa	1e-88	275	285	46.67
OS04G51450	Oryza sativa	4e-88	272	269	50.93
PP00168G00050	Physcomitrella patens	4e-88	272	264	51.52
PP00004G00260	Physcomitrella patens	9e-88	271	267	51.31
PP00309G00220	Physcomitrella patens	9e-88	271	283	49.82
OS08G13920	Oryza sativa	6e-87	268	262	48.09
PP00004G00240	Physcomitrella patens	2e-86	267	250	52.80
PP00309G00230	Physcomitrella patens	3e-86	266	286	47.20
ATR_00019G03550	Amborella trichopoda	4e-86	266	281	48.04
PP00168G00160	Physcomitrella patens	6e-86	266	251	52.59
AT4G03210	Arabidopsis thaliana	2e-85	265	281	45.55
ATR_00026G01070	Amborella trichopoda	2e-84	261	266	48.12
PP00026G00650	Physcomitrella patens	2e-84	262	283	49.12
AT2G14620	Arabidopsis thaliana	6e-84	261	282	46.45
ATR_00453G00010	Amborella trichopoda	3e-83	260	267	46.44
OS02G17880	Oryza sativa	1e-80	252	267	48.31
ATR_00004G02430	Amborella trichopoda	1e-80	252	268	47.01
PP00309G00140	Physcomitrella patens	1e-80	253	279	47.67
OS08G13980	Oryza sativa	4e-80	251	269	47.21
PP00195G00150	Physcomitrella patens	8e-80	251	263	46.77
AT1G11545	Arabidopsis thaliana	1e-79	250	291	45.36
OS02G17900	Oryza sativa	1e-79	249	267	47.94
PP00272G00150	Physcomitrella patens	2e-79	248	279	47.31
ATR_00062G00060	Amborella trichopoda	3e-79	245	194	60.82
OS06G22919	Oryza sativa	5e-78	246	290	44.83
AT4G13090	Arabidopsis thaliana	9e-77	242	284	44.01
OS07G34580	Oryza sativa	2e-74	236	270	45.93
PP00193G00050	Physcomitrella patens	2e-73	235	271	42.07
ATR_00109G01360	Amborella trichopoda	1e-72	228	196	55.10
AT3G25050	Arabidopsis thaliana	2e-72	231	261	45.21
PP00291G00470	Physcomitrella patens	4e-72	231	274	41.61
ATR_00026G01110	Amborella trichopoda	1e-70	223	214	50.00
AT4G13080	Arabidopsis thaliana	4e-70	225	269	43.12
ATR_00026G01130	Amborella trichopoda	8e-70	221	183	55.74
PP00618G00010	Physcomitrella patens	9e-69	225	270	40.74
OS04G51510	Oryza sativa	2e-64	209	278	41.01
OS06G13040	Oryza sativa	3e-62	205	271	40.22
OS07G29750	Oryza sativa	4e-61	202	267	40.07
PP00213G00650	Physcomitrella patens	2e-60	200	248	42.74
ATR_00019G03580	Amborella trichopoda	3e-60	195	145	61.38
ATR_00082G00420	Amborella trichopoda	1e-58	196	260	41.54
AT2G36870	Arabidopsis thaliana	5e-58	194	264	40.91
PP00122G00290	Physcomitrella patens	5e-58	194	290	38.28
PP00309G00200	Physcomitrella patens	3e-57	190	234	43.16
OS03G01800	Oryza sativa	5e-57	192	275	39.64
OS02G57770	Oryza sativa	6e-57	192	278	39.93
ATR_00013G00910	Amborella trichopoda	3e-56	187	224	42.86
AT3G44990	Arabidopsis thaliana	6e-56	188	299	38.13
AT1G32170	Arabidopsis thaliana	7e-56	189	288	38.54
PP00081G01240	Physcomitrella patens	6e-55	186	249	43.37
PP00156G00440	Physcomitrella patens	1e-54	185	248	38.71
PP00156G00420	Physcomitrella patens	1e-54	185	248	38.71
PP00410G00130	Physcomitrella patens	2e-54	184	287	36.93
PP00486G00100	Physcomitrella patens	4e-54	184	239	40.59
PP00486G00080	Physcomitrella patens	4e-54	184	239	40.59
PP00141G00620	Physcomitrella patens	2e-53	181	279	39.78
PP00048G00500	Physcomitrella patens	3e-53	182	270	38.52
OS10G39840	Oryza sativa	4e-53	181	256	37.50
PP00019G00220	Physcomitrella patens	6e-53	181	269	36.43
PP00011G01530	Physcomitrella patens	5e-52	179	279	37.63
AT1G10550	Arabidopsis thaliana	3e-51	176	262	38.93
ATR_00026G01150	Amborella trichopoda	3e-50	169	143	53.85
PP00346G00070	Physcomitrella patens	6e-50	175	269	37.17
ATR_00024G00080	Amborella trichopoda	9e-50	173	266	34.59
OS10G02770	Oryza sativa	1e-49	173	265	34.72
PP00089G00910	Physcomitrella patens	2e-49	172	256	39.45
AT1G14720	Arabidopsis thaliana	3e-48	169	291	34.71
PP00005G00910	Physcomitrella patens	8e-48	171	254	35.04
OS03G13570	Oryza sativa	1e-46	166	278	33.81
AT2G01850	Arabidopsis thaliana	3e-46	164	281	33.81
PP00074G00080	Physcomitrella patens	2e-45	164	260	35.00
OS03G63760	Oryza sativa	1e-44	160	300	32.33
OS09G23220	Oryza sativa	5e-44	158	276	33.33
AT4G18990	Arabidopsis thaliana	7e-44	158	269	35.69
OS02G03550	Oryza sativa	8e-44	158	259	34.36
AT3G48580	Arabidopsis thaliana	8e-40	145	254	34.25
ATR_00048G00580	Amborella trichopoda	1e-39	145	225	36.00
PP00089G00960	Physcomitrella patens	2e-38	141	207	39.13
OS10G42670	Oryza sativa	9e-38	141	283	32.86
OS02G46910	Oryza sativa	6e-37	140	271	32.47
ATR_00337G00020	Amborella trichopoda	1e-33	124	91	67.03
ATR_00062G00010	Amborella trichopoda	1e-31	121	86	69.77
ATR_00062G00030	Amborella trichopoda	9e-25	100	109	47.71
ATR_00055G01550	Amborella trichopoda	1e-20	89.4	112	48.21
PP00353G00180	Physcomitrella patens	2e-19	89.4	154	38.31
PP00037G01500	Physcomitrella patens	6e-18	87.8	170	29.41
ATR_00069G00950	Amborella trichopoda	2e-17	82.8	170	31.18
PP00002G02710	Physcomitrella patens	4e-16	75.9	76	50.00
ATR_00004G02620	Amborella trichopoda	7e-16	75.5	53	54.72
PP00024G01140	Physcomitrella patens	2e-15	80.1	194	26.80
ATR_01729G00020	Amborella trichopoda	1e-14	72.0	67	50.75
YLR213C	Saccharomyces cerevisiae strain S288C	7e-14	75.1	207	29.95
OS03G02610	Oryza sativa	1e-13	73.6	185	31.89
ATR_00065G01730	Amborella trichopoda	2e-13	68.6	72	45.83
YGR189C	Saccharomyces cerevisiae strain S288C	6e-10	63.2	152	30.26
OS04G53950	Oryza sativa	2e-09	61.6	67	46.27
ATR_00065G01780	Amborella trichopoda	1e-08	55.8	89	37.08

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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