Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT5G43980	Arabidopsis thaliana	0.0	617	304	100.00
AT2G33330	Arabidopsis thaliana	2e-83	261	310	45.81
AT1G04520	Arabidopsis thaliana	2e-81	255	296	46.96
ATR_00153G00150	Amborella trichopoda	1e-52	179	235	41.70
AT3G04370	Arabidopsis thaliana	6e-39	145	323	31.58
OS04G45460	Oryza sativa	3e-27	112	270	30.37
OS02G43000	Oryza sativa	6e-26	108	283	28.98
AT5G37660	Arabidopsis thaliana	9e-26	108	270	28.52
AT3G60720	Arabidopsis thaliana	1e-24	105	279	28.67
ATR_00011G01470	Amborella trichopoda	3e-24	103	228	33.77
OS06G14280	Oryza sativa	2e-23	102	224	29.02
AT1G70690	Arabidopsis thaliana	2e-22	99.0	222	29.73
ATR_00010G01130	Amborella trichopoda	6e-22	97.4	300	26.00
OS02G50200	Oryza sativa	5e-21	94.4	223	30.49
AT2G01660	Arabidopsis thaliana	2e-19	90.1	303	24.09
AT5G40380	Arabidopsis thaliana	2e-15	80.9	301	26.25
AT5G48540	Arabidopsis thaliana	5e-14	74.3	237	22.78
ATR_00085G00920	Amborella trichopoda	2e-12	71.6	263	27.38
AT1G61750	Arabidopsis thaliana	5e-12	69.3	206	26.21
ATR_00045G01860	Amborella trichopoda	1e-11	69.3	286	26.57
AT5G41290	Arabidopsis thaliana	2e-11	67.0	239	25.10
ATR_00085G00940	Amborella trichopoda	1e-10	65.9	308	22.73
ATR_00060G00290	Amborella trichopoda	8e-10	62.4	218	24.31
OS03G16950	Oryza sativa	9e-10	62.0	226	24.78
OS05G02200	Oryza sativa	1e-09	61.6	216	25.46
ATR_00029G01480	Amborella trichopoda	5e-09	60.8	279	25.09
ATR_00085G00960	Amborella trichopoda	7e-09	60.5	207	25.60
OS03G16960	Oryza sativa	1e-08	58.9	210	23.81
AT4G21410	Arabidopsis thaliana	1e-08	60.1	322	22.36
OS08G04210	Oryza sativa	2e-08	58.5	179	26.82
ATR_01216G00010	Amborella trichopoda	2e-08	59.3	207	27.54
ATR_00060G00320	Amborella trichopoda	3e-08	57.8	222	22.52
ATR_00085G00930	Amborella trichopoda	3e-08	58.9	238	26.47
ATR_00079G00630	Amborella trichopoda	3e-08	58.5	204	24.51
OS01G36790	Oryza sativa	8e-08	57.4	275	25.82
ATR_00007G03410	Amborella trichopoda	1e-07	56.2	202	24.26
OS08G04250	Oryza sativa	1e-07	55.8	178	27.53
OS12G41410	Oryza sativa	1e-07	56.2	208	21.15
ATR_00106G00160	Amborella trichopoda	2e-07	55.8	204	25.98
ATR_00106G00110	Amborella trichopoda	2e-07	55.5	200	25.00
OS08G04240	Oryza sativa	3e-07	55.1	192	25.00
AT4G23160	Arabidopsis thaliana	5e-07	55.1	196	22.45
AT1G63550	Arabidopsis thaliana	5e-07	54.3	219	22.83
ATR_00035G00120	Amborella trichopoda	5e-07	53.9	203	26.60
OS08G04230	Oryza sativa	6e-07	53.9	180	25.56
AT4G38830	Arabidopsis thaliana	1e-06	53.9	217	23.96
ATR_00019G03710	Amborella trichopoda	3e-06	52.4	279	25.09
AT1G19090	Arabidopsis thaliana	3e-06	52.4	185	23.24
ATR_00010G01140	Amborella trichopoda	5e-06	50.1	164	21.95
OS07G35140	Oryza sativa	8e-06	51.2	252	24.60

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment