Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT5G20830	Arabidopsis thaliana	0.0	1674	809	100.00
AT3G43190	Arabidopsis thaliana	0.0	1520	809	89.00
OS06G09450	Oryza sativa	0.0	1254	800	73.62
OS07G42490	Oryza sativa	0.0	1244	805	72.55
OS03G28330	Oryza sativa	0.0	1232	805	71.80
ATR_00106G00050	Amborella trichopoda	0.0	1213	806	71.09
AT4G02280	Arabidopsis thaliana	0.0	1163	812	67.73
OS03G22120	Oryza sativa	0.0	1151	802	67.83
AT5G49190	Arabidopsis thaliana	0.0	1139	802	66.96
PP00028G02030	Physcomitrella patens	0.0	1046	804	61.57
PP00093G00500	Physcomitrella patens	0.0	1040	811	60.67
PP00120G00370	Physcomitrella patens	0.0	1009	777	61.52
PP00303G00240	Physcomitrella patens	0.0	1008	810	60.37
ATR_00044G00210	Amborella trichopoda	0.0	948	813	56.70
AT1G73370	Arabidopsis thaliana	0.0	924	812	55.05
OS04G24430	Oryza sativa	0.0	914	804	55.60
OS02G58480	Oryza sativa	0.0	904	803	55.17
AT5G37180	Arabidopsis thaliana	0.0	894	793	54.22
CV00G95450	Coccomyxa subellipsoidea C-169	0.0	880	728	57.97
RCC4223.04g06590	Picochlorum_RCC4223	0.0	879	807	53.16
PI00G03370	Picochlorum sp. SENEW3 (SE3)	0.0	867	810	52.22
OS04G17650	Oryza sativa	0.0	860	753	56.18
HE0000G56330	Helicosporidium sp.	0.0	789	805	50.43
CNC64A_002G04500	Chlorella sp NC64A	0.0	701	738	49.86
AC00G61310	Asterochloris sp. Cgr-DA1pho v2.0	0.0	690	800	46.38
AP00G37470	Auxenochlorella protothecoides	0.0	617	507	58.38
AP00G37480	Auxenochlorella protothecoides	5e-103	332	405	45.68
AC00G44410	Asterochloris sp. Cgr-DA1pho v2.0	3e-41	164	546	26.37
AT4G10120	Arabidopsis thaliana	3e-39	160	525	27.81
OS01G69030	Oryza sativa	1e-38	159	507	29.19
ATR_00099G00850	Amborella trichopoda	8e-38	156	537	27.56
OS02G09170	Oryza sativa	9e-38	156	524	27.29
PP00066G01210	Physcomitrella patens	3e-37	154	529	28.17
PP00131G00600	Physcomitrella patens	7e-37	153	528	28.03
OS06G43630	Oryza sativa	5e-36	150	568	26.23
OS08G20660	Oryza sativa	5e-35	147	527	26.57
AT5G11110	Arabidopsis thaliana	3e-34	145	535	26.54
ATR_00033G01740	Amborella trichopoda	9e-34	144	519	26.78
gsu138950	Galdieria sulphuraria	1e-33	142	502	25.30
OS11G12810	Oryza sativa	1e-33	143	532	27.26
AT1G04920	Arabidopsis thaliana	2e-33	142	527	26.94
CV00G68630	Coccomyxa subellipsoidea C-169	3e-32	139	589	25.81
AT5G20280	Arabidopsis thaliana	4e-30	132	542	25.65
RCC4223.05g02250	Picochlorum_RCC4223	3e-27	122	198	34.85
CNC64A_014G03230	Chlorella sp NC64A	9e-27	120	200	36.00
PI00G14670	Picochlorum sp. SENEW3 (SE3)	1e-26	121	198	34.85
HE0000G57540	Helicosporidium sp.	4e-26	117	196	34.69
AP00G64190	Auxenochlorella protothecoides	8e-24	112	196	33.67
CR12G08850	Chlamydomonas reinhardtii	6e-23	109	192	34.90
DDB_G0272730	Dictyostelium discoideum	8e-10	65.9	209	25.36
PTI_18G01360	Phaeodactylum tricornutum	2e-09	65.1	201	26.87
ES0097G00100	Ectocarpus siliculosus	9e-09	62.8	199	26.13
PP00246G00410	Physcomitrella patens	1e-08	62.4	205	24.88
ENSG00000119523	Homo sapiens	2e-08	61.6	199	28.14
CM20G01680	Cyanidioschyzon merolae	5e-08	60.5	205	25.37

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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