Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT5G10220	Arabidopsis thaliana	0.0	656	319	100.00
AT5G10230	Arabidopsis thaliana	0.0	551	319	82.45
AT5G65020	Arabidopsis thaliana	6e-180	507	320	75.00
AT1G35720	Arabidopsis thaliana	2e-137	399	320	60.94
ATR_00060G01140	Amborella trichopoda	2e-131	384	315	59.05
ATR_00060G01130	Amborella trichopoda	3e-131	384	315	58.73
OS02G51750	Oryza sativa	8e-123	362	314	59.87
OS06G11800	Oryza sativa	2e-122	361	319	58.31
ATR_00097G00160	Amborella trichopoda	6e-110	329	314	51.91
AT5G12380	Arabidopsis thaliana	6e-101	306	315	50.16
OS01G31270	Oryza sativa	5e-86	267	315	46.03
OS05G31760	Oryza sativa	6e-81	257	319	43.26
AT2G38760	Arabidopsis thaliana	7e-75	239	320	41.56
OS09G23160	Oryza sativa	4e-67	219	315	38.10
AT1G68090	Arabidopsis thaliana	3e-66	217	315	36.51
PP00037G01320	Physcomitrella patens	1e-65	215	315	37.14
PP00219G00010	Physcomitrella patens	6e-64	211	315	36.83
ATR_00024G00250	Amborella trichopoda	3e-63	209	314	35.99
OS08G32970	Oryza sativa	4e-62	206	321	37.69
PP00006G01290	Physcomitrella patens	9e-53	184	343	33.82
PP00102G00690	Physcomitrella patens	6e-52	182	345	33.62
PP00001G02760	Physcomitrella patens	1e-50	179	345	32.75
PP00038G00320	Physcomitrella patens	7e-50	176	348	31.32
ENSG00000138772	Homo sapiens	7e-49	172	308	35.71
FBgn0000084	Drosophila melanogaster	2e-48	171	302	34.11
ENSG00000138279	Homo sapiens	4e-46	168	310	34.52
ENSMUSG00000029484	Mus musculus	6e-46	164	308	34.09
ENSMUSG00000021814	Mus musculus	2e-44	163	310	33.87
OS07G46550	Oryza sativa	2e-43	157	333	34.23
ENSG00000122359	Homo sapiens	2e-43	160	308	33.12
ENSG00000196975	Homo sapiens	3e-43	157	303	32.34
ENSMUSG00000029994	Mus musculus	6e-43	156	303	32.01
ENSMUSG00000021866	Mus musculus	2e-42	158	308	32.79
AT2G38750	Arabidopsis thaliana	3e-41	151	323	33.44
ENSMUSG00000055114	Mus musculus	4e-41	151	299	32.78
ENSMUSG00000021950	Mus musculus	1e-40	150	305	32.46
ENSG00000197043	Homo sapiens	5e-40	152	315	29.84
FBgn0000083	Drosophila melanogaster	4e-39	146	313	34.50
ATR_00004G01110	Amborella trichopoda	5e-38	143	315	31.11
FBgn0030749	Drosophila melanogaster	7e-38	145	304	32.57
OS05G31750	Oryza sativa	2e-37	141	320	32.81
ENSG00000264230	Homo sapiens	2e-37	142	301	32.23
ENSG00000265190	Homo sapiens	3e-37	142	301	32.23
ENSMUSG00000027712	Mus musculus	4e-37	140	303	32.67
ENSG00000135046	Homo sapiens	3e-35	136	303	31.68
ENSMUSG00000031635	Mus musculus	4e-35	135	313	29.71
WBGene00003588	Caenorhabditis elegans	1e-34	134	306	30.72
WBGene00003589	Caenorhabditis elegans	5e-34	134	305	30.49
PP00061G01290	Physcomitrella patens	7e-33	131	341	27.57
ENSMUSG00000024659	Mus musculus	3e-32	127	309	30.74
ENSG00000182718	Homo sapiens	2e-31	125	309	30.74
ENSMUSG00000032231	Mus musculus	2e-31	125	309	30.74
OS09G27990	Oryza sativa	3e-31	124	307	29.32
WBGene00003590	Caenorhabditis elegans	2e-29	119	299	30.10
DDB_G0269160	Dictyostelium discoideum	5e-29	119	306	30.72
OS09G20330	Oryza sativa	2e-25	108	285	27.72
ES0155G00180	Ectocarpus siliculosus	9e-23	103	300	26.00
WBGene00003591	Caenorhabditis elegans	1e-21	97.4	307	25.73
TP14G02820	Thalassiosira pseudonana	2e-21	96.3	317	26.81
phs219190	Phytophtora sojae	9e-21	94.4	304	25.99
ES0133G00140	Ectocarpus siliculosus	7e-20	94.4	314	26.43
ENSMUSG00000015702	Mus musculus	4e-17	84.0	301	24.58
ATR_00010G01760	Amborella trichopoda	7e-17	80.9	162	32.10
phs337890	Phytophtora sojae	1e-16	83.6	312	24.36
phs115950	Phytophtora sojae	3e-16	81.6	296	23.65
OT_11G03090	Ostreococcus tauri	1e-15	81.3	308	24.35
AA0017G00490	Aureococcus anophagefferens	1e-14	76.3	292	22.60
ORCC809_11G03880	Ostreococcus sp RCC809	2e-13	74.3	308	21.43
TP02G06330	Thalassiosira pseudonana	3e-13	72.8	300	23.00
OL11G03040	Ostreococcus lucimarinus	4e-13	72.4	304	21.71
DDB_G0284261	Dictyostelium discoideum	6e-13	72.8	316	25.32
AA0017G01430	Aureococcus anophagefferens	9e-13	71.2	294	22.45
MRCC299_03G01870	Micromonas sp RCC299	5e-12	70.5	309	22.65
PTI_03G04660	Phaeodactylum tricornutum	8e-12	68.9	301	21.26
OM_11G03270	Ostreococcus mediterraneus	2e-11	68.9	310	21.94
AA0004G02990	Aureococcus anophagefferens	9e-11	65.9	312	24.04
PTI_03G04680	Phaeodactylum tricornutum	5e-10	63.5	249	23.29
phs32540	Phytophtora sojae	1e-06	53.9	320	21.88

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment