Interactive Phylogenetics Module

Gene Id
AT4G38190

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism E-value Bitscore Alignment Length Identity Percentage
AT4G38190 Arabidopsis thaliana 0.0 2304 1112 100.00
ATR_00022G01210 Amborella trichopoda 0.0 1798 1162 76.76
ATR_00048G00590 Amborella trichopoda 0.0 1709 1126 72.38
AT3G03050 Arabidopsis thaliana 0.0 1667 1143 70.34
OS06G02180 Oryza sativa 0.0 1647 1141 70.11
AT5G16910 Arabidopsis thaliana 0.0 1644 1127 70.28
OS08G25710 Oryza sativa 0.0 1623 1127 70.36
OS10G42750 Oryza sativa 0.0 1562 1131 67.37
PP00310G00070 Physcomitrella patens 0.0 1548 1131 65.16
PP00243G00060 Physcomitrella patens 0.0 1548 1151 64.55
PP00111G00250 Physcomitrella patens 0.0 1545 1160 64.22
PP00111G00180 Physcomitrella patens 0.0 1539 1150 64.43
PP00243G00010 Physcomitrella patens 0.0 1531 1153 63.92
PP00057G00480 Physcomitrella patens 0.0 1502 1152 63.37
PP00269G00120 Physcomitrella patens 0.0 1478 1119 63.63
PP00068G00840 Physcomitrella patens 0.0 1448 1125 61.96
ATR_00019G03800 Amborella trichopoda 0.0 1427 942 73.78
AT1G02730 Arabidopsis thaliana 0.0 1377 1172 59.13
AT2G33100 Arabidopsis thaliana 0.0 1375 924 69.81
OS06G22980 Oryza sativa 0.0 1311 942 67.09
OS12G36890 Oryza sativa 0.0 1290 1200 56.00
AT1G32180 Arabidopsis thaliana 0.0 1201 861 65.97
OS08G06380 Oryza sativa 0.0 849 889 49.72
AT5G05170 Arabidopsis thaliana 0.0 840 1107 42.82
OS03G59340 Oryza sativa 0.0 832 972 45.99
OS07G10770 Oryza sativa 0.0 833 971 46.04
OS09G25490 Oryza sativa 0.0 830 875 49.37
ATR_00137G00140 Amborella trichopoda 0.0 828 886 48.53
PP00030G00170 Physcomitrella patens 0.0 829 1004 45.82
AT4G18780 Arabidopsis thaliana 0.0 825 1041 43.42
ATR_00057G00940 Amborella trichopoda 0.0 809 597 68.01
PP00213G00010 Physcomitrella patens 0.0 822 963 45.69
OS01G54620 Oryza sativa 0.0 823 883 48.70
ATR_00081G00760 Amborella trichopoda 0.0 822 979 45.56
PP00029G01150 Physcomitrella patens 0.0 822 965 45.91
PP00090G01250 Physcomitrella patens 0.0 821 951 45.64
AT5G17420 Arabidopsis thaliana 0.0 815 907 46.75
ATR_00103G00760 Amborella trichopoda 0.0 816 963 46.00
ATR_00170G00010 Amborella trichopoda 0.0 807 958 46.24
PP00112G00250 Physcomitrella patens 0.0 813 1016 44.98
AT4G32410 Arabidopsis thaliana 0.0 810 941 45.70
ATR_00067G02090 Amborella trichopoda 0.0 808 1074 42.27
AT5G09870 Arabidopsis thaliana 0.0 805 944 45.34
AT2G25540 Arabidopsis thaliana 0.0 805 943 45.49
OS05G08370 Oryza sativa 0.0 800 921 46.69
OS07G14850 Oryza sativa 0.0 799 949 45.10
OS03G62090 Oryza sativa 0.0 796 911 46.43
OS07G24190 Oryza sativa 0.0 794 911 46.76
AT5G64740 Arabidopsis thaliana 0.0 793 909 46.86
ATR_00017G02090 Amborella trichopoda 0.0 791 881 48.69
AT2G21770 Arabidopsis thaliana 0.0 786 941 44.74
AT4G39350 Arabidopsis thaliana 0.0 777 996 44.38
OS07G36630 Oryza sativa 0.0 768 891 43.77
OS07G36690 Oryza sativa 0.0 755 841 45.78
OS07G36700 Oryza sativa 0.0 751 826 45.64
ATR_00045G01550 Amborella trichopoda 0.0 755 903 43.85
OS07G36740 Oryza sativa 0.0 742 826 46.97
OS07G36750 Oryza sativa 0.0 728 862 43.97
OS07G36610 Oryza sativa 0.0 722 903 43.30
ATR_00057G00930 Amborella trichopoda 0.0 617 533 56.29
ATR_00002G02960 Amborella trichopoda 0.0 608 723 47.16
PP00189G00480 Physcomitrella patens 2e-176 537 574 48.08
PP00189G00510 Physcomitrella patens 2e-176 537 574 48.08
OS10G20260 Oryza sativa 5e-160 503 590 46.27
PP00008G00780 Physcomitrella patens 4e-152 480 557 47.94
OS10G32980 Oryza sativa 4e-150 483 634 43.69
AT5G44030 Arabidopsis thaliana 7e-150 483 626 43.77
ATR_00022G00640 Amborella trichopoda 1e-145 472 505 49.90
PP00059G01570 Physcomitrella patens 1e-143 449 608 42.93
ATR_00017G00080 Amborella trichopoda 2e-106 355 728 31.04
OS10G20090 Oryza sativa 6e-102 345 777 32.56
ATR_00017G01730 Amborella trichopoda 6e-99 337 811 29.22
AT2G32610 Arabidopsis thaliana 9e-98 333 854 30.21
AT2G32530 Arabidopsis thaliana 1e-95 328 738 29.95
AT2G32620 Arabidopsis thaliana 3e-95 327 820 29.27
AT4G24010 Arabidopsis thaliana 1e-93 322 762 29.53
AT4G23990 Arabidopsis thaliana 3e-93 321 740 30.27
AT4G24000 Arabidopsis thaliana 7e-91 313 827 27.69
AT2G32540 Arabidopsis thaliana 4e-90 312 696 30.03
OS02G49332 Oryza sativa 4e-89 309 774 28.17
AT4G15290 Arabidopsis thaliana 4e-87 304 751 28.63
AT4G15320 Arabidopsis thaliana 9e-77 275 804 28.11
OS09G30120 Oryza sativa 4e-68 248 394 37.31
ATR_00061G02350 Amborella trichopoda 2e-67 246 457 34.35
OS09G30130 Oryza sativa 2e-67 245 400 34.75
AT1G55850 Arabidopsis thaliana 4e-66 242 431 34.80
ATR_00061G02330 Amborella trichopoda 1e-61 224 567 28.92
ATR_00021G02120 Amborella trichopoda 1e-60 226 389 36.25
OS04G35020 Oryza sativa 6e-56 213 528 31.44
OS06G39970 Oryza sativa 7e-54 207 339 33.63
PP00059G01580 Physcomitrella patens 5e-52 189 265 44.53
OS12G29300 Oryza sativa 5e-48 177 168 52.38
ATR_00017G00110 Amborella trichopoda 2e-46 181 316 34.49
ATR_00002G02970 Amborella trichopoda 2e-43 162 177 41.81
OS04G35030 Oryza sativa 8e-31 131 404 26.24
PP00015G00170 Physcomitrella patens 1e-25 109 90 60.00
PP00259G00110 Physcomitrella patens 1e-22 103 154 39.61
PP00120G00840 Physcomitrella patens 3e-19 90.9 64 65.62
OS07G36680 Oryza sativa 5e-19 92.4 86 52.33
PP00096G01160 Physcomitrella patens 4e-17 85.1 170 32.35
ATR_00061G02320 Amborella trichopoda 1e-16 82.4 66 51.52
OS09G30105 Oryza sativa 4e-16 84.7 114 39.47
PP00213G00500 Physcomitrella patens 2e-14 75.5 53 62.26
Naga_100079g22 Nannochloropsis gaditana 9e-13 76.6 263 28.90
ccr65060 Chondrus crispus 2e-11 72.4 298 24.50
phs115390 Phytophtora sojae 2e-11 72.8 291 23.37
ATR_00067G02080 Amborella trichopoda 5e-10 64.3 45 62.22
phs114790 Phytophtora sojae 6e-10 67.8 212 26.42
Naga_100049g27 Nannochloropsis gaditana 4e-09 64.7 194 26.29
DDB_G0269124 Dictyostelium discoideum 6e-08 61.2 309 26.86
ES0231G00120 Ectocarpus siliculosus 1e-07 60.1 177 24.86
OS06G11050 Oryza sativa 3e-07 58.2 64 48.44
PP00372G00370 Physcomitrella patens 1e-05 53.9 127 29.92

Amborella trichopoda (23 genes)
Arabidopsis thaliana (26 genes)
Asterochloris sp. Cgr-DA1pho v2.0 (0 genes)
Aureococcus anophagefferens (0 genes)
Auxenochlorella protothecoides (0 genes)
Bathycoccus prasinos (0 genes)
Caenorhabditis elegans (0 genes)
Chlamydomonas reinhardtii (0 genes)
Chlorella sp NC64A (0 genes)
Chondrus crispus (1 genes)
Coccomyxa subellipsoidea C-169 (0 genes)
Cyanidioschyzon merolae (0 genes)
Dictyostelium discoideum (1 genes)
Drosophila melanogaster (0 genes)
Ectocarpus siliculosus (1 genes)
Emiliania huxleyi (0 genes)
Fragilariopsis cylindrus (0 genes)
Galdieria sulphuraria (0 genes)
Helicosporidium sp. (0 genes)
Homo sapiens (0 genes)
Micromonas pusilla strain CCMP1545 (0 genes)
Micromonas sp RCC299 (0 genes)
Mus musculus (0 genes)
Nannochloropsis gaditana (2 genes)
Oryza sativa (33 genes)
Ostreococcus lucimarinus (0 genes)
Ostreococcus mediterraneus (0 genes)
Ostreococcus sp RCC809 (0 genes)
Ostreococcus tauri (0 genes)
Paramecium tetraurelia (0 genes)
Phaeodactylum tricornutum (0 genes)
Physcomitrella patens (24 genes)
Phytophtora sojae (2 genes)
Picochlorum sp. SENEW3 (SE3) (0 genes)
Picochlorum_RCC4223 (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Thalassiosira pseudonana (0 genes)
Volvox carteri (0 genes)

Program Settings