Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Interactive Phylogenetics Module

Gene Id: AT4G34480

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT4G34480	Arabidopsis thaliana	0.0	1030	505	100.00
AT2G16230	Arabidopsis thaliana	0.0	745	484	75.21
ATR_00059G00370	Amborella trichopoda	0.0	570	455	61.76
OS03G46660	Oryza sativa	0.0	553	462	61.26
AT5G42720	Arabidopsis thaliana	8e-164	479	376	62.50
ATR_00012G01410	Amborella trichopoda	9e-145	431	453	47.68
ATR_00009G03570	Amborella trichopoda	3e-140	419	428	48.83
AT5G24318	Arabidopsis thaliana	9e-140	418	438	45.66
OS03G12620	Oryza sativa	6e-130	392	375	55.73
OS11G47820	Oryza sativa	4e-125	381	441	43.99
ATR_00112G00280	Amborella trichopoda	2e-121	371	459	43.14
OS03G51240	Oryza sativa	3e-120	367	338	57.99
ATR_00056G01290	Amborella trichopoda	5e-120	370	436	41.06
OS01G53750	Oryza sativa	3e-119	365	432	41.67
AT4G26830	Arabidopsis thaliana	4e-118	362	458	41.27
PP00006G00160	Physcomitrella patens	2e-116	359	498	39.96
AT5G56590	Arabidopsis thaliana	1e-114	355	488	38.11
AT3G55430	Arabidopsis thaliana	2e-113	350	431	42.46
PP00098G00250	Physcomitrella patens	3e-113	351	471	40.76
AT2G05790	Arabidopsis thaliana	4e-113	350	448	41.29
AT5G55180	Arabidopsis thaliana	7e-113	349	436	41.97
OS02G53200	Oryza sativa	7e-112	348	458	42.14
ATR_00060G01250	Amborella trichopoda	1e-108	340	462	40.26
AT4G29360	Arabidopsis thaliana	2e-108	340	450	39.33
AT2G01630	Arabidopsis thaliana	1e-107	337	446	40.13
AT1G11820	Arabidopsis thaliana	4e-106	333	437	39.36
AT2G39640	Arabidopsis thaliana	5e-106	334	443	41.76
ATR_00031G00240	Amborella trichopoda	2e-105	327	341	46.04
OS02G10660	Oryza sativa	1e-101	318	319	48.59
AT1G32860	Arabidopsis thaliana	2e-101	318	323	49.85
OS03G12140	Oryza sativa	2e-101	321	436	39.91
OS01G64170	Oryza sativa	2e-101	317	335	45.97
OS02G33000	Oryza sativa	8e-101	315	321	49.22
OS07G38930	Oryza sativa	2e-100	318	501	36.53
OS04G33640	Oryza sativa	6e-100	313	320	47.81
PP00389G00270	Physcomitrella patens	1e-99	314	399	41.10
AT3G13560	Arabidopsis thaliana	4e-99	315	438	39.50
PP00001G00220	Physcomitrella patens	5e-99	314	445	37.75
ATR_00117G00360	Amborella trichopoda	9e-99	312	437	39.82
AT1G66250	Arabidopsis thaliana	1e-98	313	437	38.22
PP00051G00310	Physcomitrella patens	6e-98	312	324	46.30
ATR_00100G00050	Amborella trichopoda	9e-98	309	320	47.50
AT3G07320	Arabidopsis thaliana	4e-96	305	433	39.26
PP00218G00010	Physcomitrella patens	7e-96	306	448	37.72
OS06G34020	Oryza sativa	1e-95	304	352	42.90
PP00150G00090	Physcomitrella patens	2e-95	305	324	45.37
AT2G27500	Arabidopsis thaliana	3e-95	301	320	44.69
PP00270G00470	Physcomitrella patens	5e-95	305	452	37.83
PP00312G00180	Physcomitrella patens	5e-95	304	427	38.17
ATR_00058G02370	Amborella trichopoda	2e-94	299	344	43.31
AT1G30080	Arabidopsis thaliana	5e-94	298	340	43.82
AT3G23770	Arabidopsis thaliana	4e-93	298	437	37.07
AT3G15800	Arabidopsis thaliana	2e-92	294	329	47.11
ATR_00078G00060	Amborella trichopoda	3e-92	295	355	44.79
OS06G40490	Oryza sativa	4e-92	294	361	43.21
OS07G35350	Oryza sativa	2e-91	296	466	38.84
AT4G14080	Arabidopsis thaliana	9e-91	292	435	35.40
OS07G13580	Oryza sativa	1e-90	293	374	45.19
OS06G04080	Oryza sativa	1e-90	291	321	49.53
ATR_00068G00910	Amborella trichopoda	2e-90	292	486	37.04
ATR_00037G01070	Amborella trichopoda	2e-90	291	429	37.53
AT4G18340	Arabidopsis thaliana	5e-90	287	344	41.28
AT2G26600	Arabidopsis thaliana	5e-90	287	336	41.37
ATR_00117G00390	Amborella trichopoda	8e-90	290	471	35.88
AT5G42100	Arabidopsis thaliana	1e-89	287	323	46.75
OS08G14700	Oryza sativa	5e-89	290	434	38.25
OS07G35510	Oryza sativa	2e-87	286	434	37.33
OS07G35480	Oryza sativa	2e-86	283	479	38.20
OS09G32550	Oryza sativa	5e-86	280	476	35.29
PP00085G00580	Physcomitrella patens	1e-85	280	482	35.89
OS08G41410	Oryza sativa	1e-84	277	437	37.76
PP00138G00240	Physcomitrella patens	1e-82	272	463	34.56
OS03G14210	Oryza sativa	1e-82	269	347	42.65
OS07G35520	Oryza sativa	2e-81	270	447	36.47
AT3G46570	Arabidopsis thaliana	2e-81	264	348	44.54
OS07G35560	Oryza sativa	6e-80	267	456	37.06
OS07G32600	Oryza sativa	7e-80	265	442	37.33
OS05G41610	Oryza sativa	2e-78	256	329	43.16
OS10G07290	Oryza sativa	2e-77	255	324	44.44
PP00026G00770	Physcomitrella patens	1e-76	252	339	41.89
OS01G58730	Oryza sativa	1e-76	251	318	43.08
PP00280G00250	Physcomitrella patens	2e-76	250	338	39.94
PP00284G00010	Physcomitrella patens	4e-76	251	325	42.77
PP00145G00590	Physcomitrella patens	6e-76	254	426	35.92
OS03G62860	Oryza sativa	3e-75	251	447	33.56
PP00053G00310	Physcomitrella patens	6e-74	247	342	43.27
PP00197G00850	Physcomitrella patens	5e-72	241	344	40.41
OS01G71830	Oryza sativa	1e-71	237	318	41.19
PP00070G01270	Physcomitrella patens	6e-71	239	325	42.15
OS09G36280	Oryza sativa	6e-71	236	322	42.24
OS01G71810	Oryza sativa	6e-71	235	318	41.82
PP00268G00250	Physcomitrella patens	2e-70	238	334	41.32
ATR_00107G00020	Amborella trichopoda	3e-70	233	309	41.42
AT4G16260	Arabidopsis thaliana	3e-70	234	332	40.66
OS01G71820	Oryza sativa	9e-70	232	318	41.51
PP00026G00780	Physcomitrella patens	2e-69	232	321	42.37
PP00190G00160	Physcomitrella patens	2e-69	235	313	40.89
OS01G71680	Oryza sativa	6e-69	231	320	40.62
AT3G61810	Arabidopsis thaliana	6e-69	231	331	38.37
OS01G71860	Oryza sativa	2e-68	237	340	40.88
ATR_00053G01320	Amborella trichopoda	2e-68	228	312	40.38
PP00162G00140	Physcomitrella patens	4e-68	233	434	35.25
AT3G57270	Arabidopsis thaliana	8e-68	228	321	39.56
OS01G71380	Oryza sativa	1e-67	227	339	40.71
AT3G57260	Arabidopsis thaliana	2e-67	226	339	38.64
PP00040G00940	Physcomitrella patens	3e-67	228	332	40.96
ATR_00012G01430	Amborella trichopoda	8e-67	223	249	46.59
OS06G39060	Oryza sativa	1e-66	229	434	33.87
ATR_00053G01260	Amborella trichopoda	1e-66	224	329	39.21
PP00007G00270	Physcomitrella patens	8e-66	226	336	39.88
OS05G37130	Oryza sativa	2e-65	220	217	47.00
OS01G71670	Oryza sativa	7e-65	220	318	41.19
ATR_00022G02030	Amborella trichopoda	9e-65	224	443	33.18
AT5G20870	Arabidopsis thaliana	3e-64	223	468	33.97
ATR_00156G00070	Amborella trichopoda	6e-64	217	321	39.25
OS01G71930	Oryza sativa	7e-63	222	324	41.05
PP00157G00080	Physcomitrella patens	1e-62	218	438	34.25
OS01G51570	Oryza sativa	3e-62	213	344	42.73
OS01G71340	Oryza sativa	4e-62	212	318	42.14
ATR_00104G00300	Amborella trichopoda	1e-61	215	437	32.72
AT4G31140	Arabidopsis thaliana	1e-61	215	431	32.48
PP00334G00320	Physcomitrella patens	1e-60	211	320	39.69
OS01G71410	Oryza sativa	2e-60	209	320	42.19
AT1G77780	Arabidopsis thaliana	7e-60	207	360	37.78
OS01G71400	Oryza sativa	8e-60	206	322	40.68
OS07G07340	Oryza sativa	1e-59	210	433	33.03
OS02G04670	Oryza sativa	1e-59	210	431	33.18
AT3G24330	Arabidopsis thaliana	1e-59	210	460	32.61
ATR_00131G00420	Amborella trichopoda	2e-59	210	435	33.10
AT5G58090	Arabidopsis thaliana	2e-59	209	435	32.41
AT5G18220	Arabidopsis thaliana	3e-59	209	439	31.66
AT5G64790	Arabidopsis thaliana	3e-59	209	435	31.72
OS01G71350	Oryza sativa	8e-58	201	318	39.94
OS08G12800	Oryza sativa	2e-57	204	437	33.64
ATR_00004G00660	Amborella trichopoda	3e-57	203	438	32.88
AT3G04010	Arabidopsis thaliana	1e-56	202	440	31.82
AT2G19440	Arabidopsis thaliana	2e-56	201	437	33.64
OS03G45390	Oryza sativa	3e-56	201	436	33.26
OS01G71474	Oryza sativa	4e-56	197	320	39.69
OS03G27980	Oryza sativa	4e-56	201	437	32.49
AT1G77790	Arabidopsis thaliana	7e-56	196	317	38.49
AT1G64760	Arabidopsis thaliana	9e-56	199	437	32.95
AT3G57240	Arabidopsis thaliana	1e-55	195	321	37.69
AT5G20390	Arabidopsis thaliana	2e-55	195	319	35.74
OS09G09980	Oryza sativa	3e-55	198	437	31.81
ATR_00053G01280	Amborella trichopoda	3e-55	193	314	37.58
ATR_00007G00030	Amborella trichopoda	4e-55	197	441	31.75
PP00027G01390	Physcomitrella patens	7e-55	197	434	32.95
ATR_00061G01310	Amborella trichopoda	1e-54	196	436	31.88
OS03G57880	Oryza sativa	2e-54	196	436	33.26
ATR_00044G01260	Amborella trichopoda	3e-54	189	241	43.15
OS05G31140	Oryza sativa	5e-54	191	318	38.36
OS01G71690	Oryza sativa	6e-54	199	314	41.40
ATR_00025G03070	Amborella trichopoda	8e-54	194	453	30.68
OS11G36940	Oryza sativa	9e-54	194	430	32.09
AT5G58480	Arabidopsis thaliana	1e-53	194	435	32.41
AT5G20340	Arabidopsis thaliana	3e-53	189	321	35.51
AT4G17180	Arabidopsis thaliana	1e-52	191	449	31.63
PP00054G00730	Physcomitrella patens	4e-52	190	458	32.97
AT3G55780	Arabidopsis thaliana	6e-52	188	307	39.41
OS08G23720	Oryza sativa	8e-52	189	434	32.03
OS03G18520	Oryza sativa	9e-52	189	433	32.33
AT1G33220	Arabidopsis thaliana	2e-49	179	312	35.58
PP00197G00340	Physcomitrella patens	3e-49	182	435	32.87
AT5G20330	Arabidopsis thaliana	3e-49	178	321	34.58
ATR_00053G01270	Amborella trichopoda	3e-49	177	313	36.74
ATR_00044G01250	Amborella trichopoda	1e-48	172	217	42.40
PP00014G00160	Physcomitrella patens	6e-48	178	434	32.49
ATR_00013G01290	Amborella trichopoda	2e-46	169	321	33.96
OS05G45860	Oryza sativa	4e-45	169	387	31.27
AT5G20560	Arabidopsis thaliana	2e-44	164	310	32.90
ATR_03830G00010	Amborella trichopoda	3e-44	164	311	36.01
PP00334G00230	Physcomitrella patens	1e-39	149	283	34.63
PP00447G00070	Physcomitrella patens	2e-38	146	261	36.78
ES0128G00270	Ectocarpus siliculosus	9e-38	146	331	32.33
OS01G71650	Oryza sativa	3e-35	136	239	39.33
ATR_00053G01290	Amborella trichopoda	4e-35	135	220	38.64
ATR_00156G00080	Amborella trichopoda	3e-25	109	287	31.01
OS01G44090	Oryza sativa	1e-24	107	91	52.75
AT4G13600	Arabidopsis thaliana	1e-24	106	93	48.39
ATR_00092G00140	Amborella trichopoda	5e-24	103	97	49.48
ATR_00110G01170	Amborella trichopoda	1e-23	100	90	51.11
AT4G05430	Arabidopsis thaliana	5e-23	99.8	97	47.42
AT5G61130	Arabidopsis thaliana	2e-22	99.4	89	48.31
ATR_00013G02250	Amborella trichopoda	3e-22	99.0	90	46.67
OS05G50490	Oryza sativa	4e-22	100	86	53.49
AT4G09462	Arabidopsis thaliana	4e-22	96.3	88	44.32
AT1G18650	Arabidopsis thaliana	5e-22	98.2	89	48.31
ATR_00021G01160	Amborella trichopoda	5e-22	97.4	79	58.23
AT4G09090	Arabidopsis thaliana	6e-22	95.9	88	43.18
AT1G66855	Arabidopsis thaliana	8e-22	95.5	90	42.22
ATR_00086G00620	Amborella trichopoda	9e-22	98.6	142	36.62
AT5G63225	Arabidopsis thaliana	1e-21	95.1	89	43.82
AT4G09465	Arabidopsis thaliana	1e-21	95.1	88	43.18
AT4G09464	Arabidopsis thaliana	1e-21	95.1	88	43.18
AT4G09467	Arabidopsis thaliana	1e-21	95.1	88	43.18
AT1G66870	Arabidopsis thaliana	2e-21	94.4	91	42.86
OS02G29980	Oryza sativa	2e-21	96.3	87	47.13
AT4G09466	Arabidopsis thaliana	3e-21	94.0	88	43.18
PP00301G00080	Physcomitrella patens	5e-21	95.9	129	38.76
ATR_00045G00710	Amborella trichopoda	6e-21	100	90	51.11
AT5G67460	Arabidopsis thaliana	7e-21	98.2	380	26.05
OS07G40940	Oryza sativa	1e-20	94.4	99	40.40
OS01G55820	Oryza sativa	1e-20	94.7	92	44.57
AT5G63230	Arabidopsis thaliana	2e-20	92.0	89	40.45
Naga_100464g2	Nannochloropsis gaditana	6e-20	95.5	331	27.79
ATR_00013G01360	Amborella trichopoda	7e-20	90.9	132	39.39
AT4G16165	Arabidopsis thaliana	1e-19	89.7	91	43.96
OS03G54910	Oryza sativa	1e-19	91.3	85	43.53
OS06G34660	Oryza sativa	2e-19	91.3	90	50.00
AT5G63250	Arabidopsis thaliana	2e-19	89.4	87	40.23
ATR_00028G00630	Amborella trichopoda	2e-19	89.4	85	44.71
AT5G08000	Arabidopsis thaliana	2e-19	90.9	89	47.19
OS03G61780	Oryza sativa	3e-19	95.1	117	41.03
AT5G63240	Arabidopsis thaliana	3e-19	89.0	123	37.40
AT1G66852	Arabidopsis thaliana	8e-19	87.0	91	42.86
OS01G14140	Oryza sativa	3e-18	85.9	84	46.43
ATR_00028G00620	Amborella trichopoda	8e-18	84.7	85	42.35
AT2G30933	Arabidopsis thaliana	1e-17	86.7	86	45.35
PP00012G01450	Physcomitrella patens	1e-17	85.5	145	28.97
AT3G58100	Arabidopsis thaliana	1e-17	85.5	94	41.49
OS03G25790	Oryza sativa	2e-17	89.4	99	47.47
PP00132G00380	Physcomitrella patens	2e-17	85.9	114	36.84
AT1G09460	Arabidopsis thaliana	2e-17	87.4	95	44.21
AT2G43670	Arabidopsis thaliana	2e-17	83.2	88	37.50
AT1G29380	Arabidopsis thaliana	3e-17	86.7	85	45.88
AT1G78520	Arabidopsis thaliana	5e-17	82.0	84	38.10
PP00109G00530	Physcomitrella patens	7e-17	84.3	211	28.91
OS03G30830	Oryza sativa	9e-17	83.2	103	35.92
AT5G53600	Arabidopsis thaliana	1e-16	80.9	84	38.10
OS03G40330	Oryza sativa	2e-16	82.4	127	40.94
PP00325G00040	Physcomitrella patens	3e-16	83.6	86	39.53
OS07G43940	Oryza sativa	6e-16	81.3	93	43.01
ATR_00164G00170	Amborella trichopoda	9e-16	83.6	92	40.22
OS03G56130	Oryza sativa	9e-16	83.2	179	35.20
AT1G79480	Arabidopsis thaliana	2e-15	82.0	88	38.64
ATR_00217G00090	Amborella trichopoda	3e-15	77.4	84	45.24
OS05G43690	Oryza sativa	3e-15	79.3	85	41.18
AT5G35740	Arabidopsis thaliana	5e-15	76.6	89	39.33
ATR_00002G00460	Amborella trichopoda	9e-15	79.3	82	36.59
AT1G13830	Arabidopsis thaliana	2e-14	76.6	86	41.86
OS03G22530	Oryza sativa	2e-14	75.5	113	41.59
AT1G69295	Arabidopsis thaliana	3e-14	75.9	89	41.57
ATR_00104G00310	Amborella trichopoda	4e-14	75.5	138	36.96
OS10G20650	Oryza sativa	4e-14	77.4	85	41.18
AT2G03505	Arabidopsis thaliana	6e-14	74.3	91	38.46
OS06G45450	Oryza sativa	9e-14	74.7	85	36.47
AT2G42930	Arabidopsis thaliana	3e-13	72.0	82	41.46
AT5G53610	Arabidopsis thaliana	4e-13	70.9	87	36.78
AT2G04910	Arabidopsis thaliana	9e-13	70.1	79	40.51
OS07G41014	Oryza sativa	2e-12	73.9	177	33.33
PP00110G00260	Physcomitrella patens	2e-12	69.3	84	40.48
AT2G43660	Arabidopsis thaliana	4e-12	68.6	85	34.12
AT3G28250	Arabidopsis thaliana	2e-11	65.9	78	35.90
emh707260	Emiliania huxleyi	4e-11	68.9	353	24.36
emh134840	Emiliania huxleyi	4e-11	68.9	353	24.36
AT1G26450	Arabidopsis thaliana	1e-10	65.1	71	42.25
OS08G04140	Oryza sativa	4e-09	59.7	91	35.16
AA0001G04770	Aureococcus anophagefferens	7e-09	58.2	87	40.23
MRCC299_09G03220	Micromonas sp RCC299	7e-08	58.9	86	37.21

External Sequences (optional)

External Sequences Type

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MSA algorithm
Tree construction algorithm
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