Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT4G13240	Arabidopsis thaliana	0.0	1061	518	100.00
AT3G24620	Arabidopsis thaliana	0.0	826	530	79.43
ATR_00109G00500	Amborella trichopoda	0.0	609	503	63.62
AT1G79860	Arabidopsis thaliana	0.0	533	465	59.57
AT5G19560	Arabidopsis thaliana	0.0	530	475	61.26
OS05G48640	Oryza sativa	0.0	528	460	57.17
AT1G52240	Arabidopsis thaliana	7e-179	524	464	59.91
OS02G17240	Oryza sativa	1e-177	517	498	57.03
OS01G48410	Oryza sativa	1e-176	516	439	59.00
OS01G55520	Oryza sativa	3e-169	496	458	55.68
AT3G16130	Arabidopsis thaliana	7e-152	454	353	61.47
PP00022G01230	Physcomitrella patens	1e-139	422	369	55.83
ATR_00165G00260	Amborella trichopoda	3e-133	409	378	51.59
OS01G62990	Oryza sativa	3e-133	405	395	50.38
PP00058G01440	Physcomitrella patens	4e-133	409	373	52.82
OS05G38000	Oryza sativa	5e-131	400	369	53.39
PP00007G01250	Physcomitrella patens	2e-130	403	372	51.88
PP00028G00550	Physcomitrella patens	8e-129	398	373	51.74
AT4G38430	Arabidopsis thaliana	1e-128	393	384	51.56
AT5G02010	Arabidopsis thaliana	5e-127	389	402	47.26
PP00283G00010	Physcomitrella patens	9e-127	390	366	55.19
PP00034G02160	Physcomitrella patens	3e-126	392	381	51.97
OS09G37270	Oryza sativa	3e-125	384	393	50.38
ATR_00001G01740	Amborella trichopoda	1e-123	380	382	50.00
AT4G00460	Arabidopsis thaliana	5e-122	373	404	46.78
AT5G05940	Arabidopsis thaliana	8e-122	377	380	48.95
OS07G29780	Oryza sativa	2e-117	361	357	48.46
AT1G01700	Arabidopsis thaliana	2e-115	357	381	47.24
AT3G55660	Arabidopsis thaliana	2e-115	360	370	48.65
OS10G40270	Oryza sativa	6e-114	353	376	46.54
OS04G47170	Oryza sativa	1e-113	351	376	47.34
AT2G45890	Arabidopsis thaliana	1e-110	343	377	46.15
ATR_00011G02100	Amborella trichopoda	5e-108	340	392	43.37
OS02G47420	Oryza sativa	2e-103	327	401	42.89
ATR_00024G03180	Amborella trichopoda	7e-97	307	361	46.54
AT1G31650	Arabidopsis thaliana	9e-93	301	360	44.44
ATR_00009G02480	Amborella trichopoda	2e-35	139	185	41.08
CM05G01030	Cyanidioschyzon merolae	1e-30	130	363	29.20
ccr69780	Chondrus crispus	1e-26	117	339	28.91
gsu74030	Galdieria sulphuraria	2e-18	92.4	242	28.51
ATR_00240G00020	Amborella trichopoda	8e-10	62.0	51	56.86
ATR_02461G00010	Amborella trichopoda	1e-09	62.4	55	56.36
ATR_03138G00010	Amborella trichopoda	2e-09	60.8	47	63.83
ATR_03326G00010	Amborella trichopoda	4e-09	60.1	61	49.18
ATR_00054G00020	Amborella trichopoda	4e-08	56.6	39	71.79
gsu74050	Galdieria sulphuraria	7e-08	55.8	97	35.05
OS04G44170	Oryza sativa	2e-07	55.5	51	56.86

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment