Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT4G12720	Arabidopsis thaliana	0.0	669	323	100.00
AT2G04450	Arabidopsis thaliana	2e-114	340	322	53.73
AT2G04430	Arabidopsis thaliana	7e-98	298	326	48.47
OS06G42790	Oryza sativa	2e-82	261	298	44.97
AT5G47650	Arabidopsis thaliana	8e-81	253	308	43.18
PP00038G00880	Physcomitrella patens	3e-70	226	307	39.09
PP00014G01500	Physcomitrella patens	9e-69	226	299	41.81
AT4G25434	Arabidopsis thaliana	3e-65	214	317	38.49
AT5G47240	Arabidopsis thaliana	4e-63	211	309	39.81
OS04G46280	Oryza sativa	3e-60	203	298	39.93
CV00G44070	Coccomyxa subellipsoidea C-169	3e-51	176	289	35.64
CR08G02860	Chlamydomonas reinhardtii	3e-50	175	288	35.76
AT2G04440	Arabidopsis thaliana	7e-50	171	156	55.13
AP00G50250	Auxenochlorella protothecoides	8e-49	171	281	38.43
CNC64A_004G00950	Chlorella sp NC64A	4e-48	167	265	35.85
ES0035G00160	Ectocarpus siliculosus	9e-47	166	272	36.76
AC00G06750	Asterochloris sp. Cgr-DA1pho v2.0	2e-46	165	296	33.45
HE0000G36770	Helicosporidium sp.	4e-46	163	274	37.23
Naga_100320g2	Nannochloropsis gaditana	1e-45	163	274	33.58
VC00G31510	Volvox carteri	2e-45	163	309	33.33
OM_14G01970	Ostreococcus mediterraneus	2e-43	158	311	33.12
ORCC809_14G01520	Ostreococcus sp RCC809	1e-42	154	291	32.65
TP08G04120	Thalassiosira pseudonana	2e-37	139	255	30.98
OT_15G01160	Ostreococcus tauri	1e-36	138	304	30.92
PI00G17090	Picochlorum sp. SENEW3 (SE3)	6e-36	138	306	30.72
RCC4223.13g02600	Picochlorum_RCC4223	1e-35	137	306	31.37
OL14G01710	Ostreococcus lucimarinus	2e-35	135	297	30.64
OL14G01040	Ostreococcus lucimarinus	2e-35	135	297	30.64
BPRRCC1105_02G01990	Bathycoccus prasinos	3e-34	134	259	32.43
DDB_G0281219	Dictyostelium discoideum	5e-33	130	308	29.55
MRCC299_04G07420	Micromonas sp RCC299	8e-33	125	228	35.09
MP04G00300	Micromonas pusilla strain CCMP1545	3e-32	127	283	32.86
TP11G01210	Thalassiosira pseudonana	9e-30	117	235	31.06
FC009G01540	Fragilariopsis cylindrus	2e-27	111	227	32.60
ES0000G00860	Ectocarpus siliculosus	1e-26	111	281	26.33
FC018G00980	Fragilariopsis cylindrus	5e-26	108	269	27.14
PTI_18G00790	Phaeodactylum tricornutum	1e-24	107	290	27.24
FBgn0030668	Drosophila melanogaster	2e-24	105	253	29.25
OS02G13350	Oryza sativa	2e-23	102	286	25.87
emh702560	Emiliania huxleyi	2e-23	99.4	195	32.82
ATR_00111G00760	Amborella trichopoda	7e-23	100	121	42.98
ATR_00056G01570	Amborella trichopoda	1e-20	93.6	119	41.18
PTI_28G00170	Phaeodactylum tricornutum	4e-20	92.0	239	29.29
Naga_100248g4	Nannochloropsis gaditana	5e-19	90.5	231	26.84
pte672230	Paramecium tetraurelia	1e-18	87.8	180	30.56
pte504470	Paramecium tetraurelia	2e-15	79.0	147	30.61
pte502270	Paramecium tetraurelia	4e-15	77.8	210	27.14
emh576470	Emiliania huxleyi	3e-14	73.9	256	26.56
emh101150	Emiliania huxleyi	3e-14	73.9	256	26.56
emh226960	Emiliania huxleyi	3e-14	73.9	256	26.56
emh385230	Emiliania huxleyi	2e-10	65.1	255	25.49
emh142960	Emiliania huxleyi	2e-10	64.7	255	25.49
pte674660	Paramecium tetraurelia	2e-09	61.2	229	23.58
emh142900	Emiliania huxleyi	3e-09	59.3	97	34.02
pte686100	Paramecium tetraurelia	9e-07	52.8	115	26.09

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
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