Interactive Phylogenetics Module

Gene Id
AT4G04340

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism E-value Bitscore Alignment Length Identity Percentage
AT4G04340 Arabidopsis thaliana 0.0 1592 773 100.00
AT4G22120 Arabidopsis thaliana 0.0 1336 774 85.01
AT1G11960 Arabidopsis thaliana 0.0 1137 761 72.80
OS01G35050 Oryza sativa 0.0 1129 774 70.80
OS05G51630 Oryza sativa 0.0 1097 764 68.85
AT3G21620 Arabidopsis thaliana 0.0 1094 759 71.67
ATR_00007G02920 Amborella trichopoda 0.0 1079 755 70.99
AT1G62320 Arabidopsis thaliana 0.0 1077 765 70.46
AT4G15430 Arabidopsis thaliana 0.0 1065 766 66.84
ATR_00025G00850 Amborella trichopoda 0.0 1042 755 68.48
OS05G32720 Oryza sativa 0.0 1003 761 62.42
ATR_00048G00910 Amborella trichopoda 0.0 1001 753 61.89
AT4G02900 Arabidopsis thaliana 0.0 984 763 62.91
OS10G42820 Oryza sativa 0.0 929 718 63.09
AT1G32090 Arabidopsis thaliana 0.0 887 721 60.61
PP00322G00150 Physcomitrella patens 0.0 771 797 47.05
PP00013G01960 Physcomitrella patens 0.0 742 747 49.00
PP00035G01570 Physcomitrella patens 0.0 680 764 46.60
PP00028G02090 Physcomitrella patens 0.0 604 772 41.58
PP00127G00320 Physcomitrella patens 0.0 607 730 43.56
ATR_00058G00270 Amborella trichopoda 6e-138 431 710 33.80
ATR_00044G01990 Amborella trichopoda 7e-134 422 730 34.25
AT3G01100 Arabidopsis thaliana 1e-132 417 725 33.38
OS12G43720 Oryza sativa 8e-125 398 688 32.70
PP00078G00550 Physcomitrella patens 3e-122 391 727 33.15
OS03G51620 Oryza sativa 6e-117 377 719 31.02
OS12G39320 Oryza sativa 3e-114 369 658 33.28
AT1G69450 Arabidopsis thaliana 5e-114 368 730 29.73
ATR_00092G00220 Amborella trichopoda 1e-113 367 725 32.55
PP00213G00270 Physcomitrella patens 5e-113 367 708 33.47
OS07G05570 Oryza sativa 3e-112 364 695 32.52
PP00087G00060 Physcomitrella patens 1e-111 363 684 33.48
PP00046G00690 Physcomitrella patens 2e-108 354 693 33.62
AT3G54510 Arabidopsis thaliana 2e-104 343 713 31.42
PP00086G00310 Physcomitrella patens 2e-104 343 685 33.14
PP00127G00130 Physcomitrella patens 4e-104 343 696 31.32
PP00053G00640 Physcomitrella patens 6e-103 340 689 32.08
PP00011G01700 Physcomitrella patens 8e-103 339 684 32.16
AT1G10090 Arabidopsis thaliana 2e-100 333 695 31.51
AT1G30360 Arabidopsis thaliana 7e-99 328 710 30.42
AT1G58520 Arabidopsis thaliana 7e-96 327 706 30.31
OS01G72210 Oryza sativa 7e-87 296 718 29.11
ATR_00038G01260 Amborella trichopoda 9e-86 285 278 53.96
PP00068G00850 Physcomitrella patens 1e-81 274 439 37.59
OS03G47070 Oryza sativa 6e-79 268 451 33.04
PP00096G01060 Physcomitrella patens 3e-76 267 665 28.12
PP00106G00150 Physcomitrella patens 2e-72 244 261 46.74
Naga_100007g21 Nannochloropsis gaditana 5e-60 222 672 26.49
AP00G02700 Auxenochlorella protothecoides 1e-58 219 535 29.16
gsu94270 Galdieria sulphuraria 4e-57 213 674 25.96
RCC4223.03g04170 Picochlorum_RCC4223 1e-56 213 530 29.81
FC028G00290 Fragilariopsis cylindrus 2e-54 202 619 26.49
CNC64A_017G00330 Chlorella sp NC64A 2e-54 207 533 28.33
DDB_G0272114 Dictyostelium discoideum 3e-53 201 688 25.87
PI00G55070 Picochlorum sp. SENEW3 (SE3) 6e-53 201 444 31.31
VC00G59150 Volvox carteri 4e-50 194 450 28.89
CR08G01170 Chlamydomonas reinhardtii 2e-49 192 378 31.75
CR09G01840 Chlamydomonas reinhardtii 5e-49 191 364 31.59
CR08G01110 Chlamydomonas reinhardtii 3e-48 189 466 29.18
CR08G01160 Chlamydomonas reinhardtii 2e-46 183 459 30.07
phs126810 Phytophtora sojae 2e-44 175 716 23.46
CV00G68020 Coccomyxa subellipsoidea C-169 4e-44 175 420 27.62
PTI_19G01920 Phaeodactylum tricornutum 7e-44 173 704 24.15
AC00G88870 Asterochloris sp. Cgr-DA1pho v2.0 1e-43 174 520 25.58
CV00G01550 Coccomyxa subellipsoidea C-169 2e-43 174 570 26.84
phs126370 Phytophtora sojae 7e-42 168 451 27.94
DDB_G0282971 Dictyostelium discoideum 1e-41 167 768 22.92
ES0261G00120 Ectocarpus siliculosus 1e-41 166 611 24.39
phs126150 Phytophtora sojae 8e-41 165 736 23.91
CR08G01140 Chlamydomonas reinhardtii 2e-40 164 500 29.20
AC00G27010 Asterochloris sp. Cgr-DA1pho v2.0 2e-39 161 475 26.11
ES0059G00880 Ectocarpus siliculosus 2e-39 160 436 28.44
DDB_G0272220 Dictyostelium discoideum 3e-39 160 463 27.65
TP06G01540 Thalassiosira pseudonana 4e-38 152 481 24.95
SPAC2G11.09 Schizosaccharomyces pombe 3e-37 154 675 22.07
VC00G121400 Volvox carteri 1e-35 149 439 28.47
YMR266W Saccharomyces cerevisiae strain S288C 6e-34 144 602 23.09
CR12G12860 Chlamydomonas reinhardtii 3e-33 142 363 29.75
RCC4223.10g03250 Picochlorum_RCC4223 5e-33 141 429 28.44
PTI_10G00540 Phaeodactylum tricornutum 3e-32 138 429 25.64
AA0006G04710 Aureococcus anophagefferens 3e-32 139 351 28.77
YLR241W Saccharomyces cerevisiae strain S288C 4e-32 137 657 22.53
Naga_100219g3 Nannochloropsis gaditana 6e-32 137 585 23.42
SPAC24H6.13 Schizosaccharomyces pombe 1e-31 136 655 22.60
AP00G62740 Auxenochlorella protothecoides 1e-31 137 435 27.59
CNC64A_013G01670 Chlorella sp NC64A 2e-31 136 405 28.64
OM_17G01120 Ostreococcus mediterraneus 3e-31 135 528 25.19
YOL084W Saccharomyces cerevisiae strain S288C 3e-31 135 822 22.63
PTI_05G00290 Phaeodactylum tricornutum 5e-31 135 483 25.26
CR13G03010 Chlamydomonas reinhardtii 2e-30 134 458 27.51
VC00G11210 Volvox carteri 8e-30 131 498 25.50
TP06G06370 Thalassiosira pseudonana 2e-29 129 547 22.49
ccr47000 Chondrus crispus 4e-29 128 638 21.32
PI00G19580 Picochlorum sp. SENEW3 (SE3) 5e-29 128 406 27.83
PTI_10G00550 Phaeodactylum tricornutum 6e-29 128 412 26.94
ATR_00097G00100 Amborella trichopoda 2e-28 118 190 35.79
Naga_100073g3 Nannochloropsis gaditana 1e-27 123 416 25.96
AC00G55180 Asterochloris sp. Cgr-DA1pho v2.0 2e-27 120 404 24.26
CV00G11960 Coccomyxa subellipsoidea C-169 3e-27 122 495 24.24
SPBC354.08c Schizosaccharomyces pombe 3e-27 122 665 21.65
MP06G03970 Micromonas pusilla strain CCMP1545 7e-27 121 499 25.85
ES0167G00140 Ectocarpus siliculosus 9e-27 121 348 27.87
PTI_02G01640 Phaeodactylum tricornutum 5e-26 119 389 24.68
TP04G02130 Thalassiosira pseudonana 1e-25 117 432 26.62
OL16G01070 Ostreococcus lucimarinus 6e-25 115 528 23.48
ORCC809_16G01620 Ostreococcus sp RCC809 2e-24 114 538 23.05
HE0000G23360 Helicosporidium sp. 6e-24 111 422 25.12
FC008G03120 Fragilariopsis cylindrus 1e-23 111 410 24.63
CR13G04040 Chlamydomonas reinhardtii 1e-23 112 377 26.26
Naga_100050g2 Nannochloropsis gaditana 1e-22 108 398 25.13
CV00G14660 Coccomyxa subellipsoidea C-169 8e-22 105 482 25.73
HE0000G37590 Helicosporidium sp. 1e-21 102 360 26.67
MRCC299_04G05540 Micromonas sp RCC299 3e-21 103 442 23.53
ENSMUSG00000036026 Mus musculus 3e-21 103 647 21.48
BPRRCC1105_06G00770 Bathycoccus prasinos 4e-21 103 466 24.25
VC00G10140 Volvox carteri 6e-21 102 402 26.37
ENSMUSG00000026519 Mus musculus 1e-20 101 608 20.89
OM_02G02320 Ostreococcus mediterraneus 1e-20 101 389 23.14
PTI_02G06800 Phaeodactylum tricornutum 1e-19 98.2 445 24.04
ccr158020 Chondrus crispus 2e-19 95.9 316 25.95
FC009G03190 Fragilariopsis cylindrus 2e-19 94.7 283 24.38
OT_17G00990 Ostreococcus tauri 3e-19 97.4 470 20.00
OT_04G02160 Ostreococcus tauri 4e-19 97.1 371 23.45
MP04G02100 Micromonas pusilla strain CCMP1545 7e-19 95.9 367 22.34
PP00106G00160 Physcomitrella patens 2e-18 88.2 63 57.14
PI00G37340 Picochlorum sp. SENEW3 (SE3) 2e-18 94.4 365 24.11
ES0171G00200 Ectocarpus siliculosus 2e-18 94.7 388 23.71
MRCC299_05G04330 Micromonas sp RCC299 3e-18 94.0 248 26.61
OM_01G00650 Ostreococcus mediterraneus 7e-18 92.8 393 23.92
AP00G67060 Auxenochlorella protothecoides 1e-17 92.0 402 23.88
FBgn0033259 Drosophila melanogaster 1e-17 91.7 557 21.36
AA0006G03160 Aureococcus anophagefferens 2e-17 91.7 330 24.24
RCC4223.04g01240 Picochlorum_RCC4223 2e-17 91.3 425 25.65
Naga_100176g13 Nannochloropsis gaditana 2e-17 91.3 339 25.37
BPRRCC1105_15G02190 Bathycoccus prasinos 2e-17 91.7 450 22.89
ORCC809_04G03050 Ostreococcus sp RCC809 1e-16 89.0 340 22.65
OL04G02150 Ostreococcus lucimarinus 7e-16 86.3 344 22.09
MRCC299_10G00340 Micromonas sp RCC299 2e-15 84.3 244 24.59
OL01G06230 Ostreococcus lucimarinus 3e-15 84.3 476 22.27
CR17G09440 Chlamydomonas reinhardtii 4e-15 84.0 264 27.27
CNC64A_004G00160 Chlorella sp NC64A 6e-15 83.2 405 22.47
OT_01G06150 Ostreococcus tauri 6e-15 83.6 360 22.78
BPRRCC1105_06G04360 Bathycoccus prasinos 2e-14 82.0 475 22.95
FC027G02400 Fragilariopsis cylindrus 3e-14 80.9 417 23.74
ORCC809_01G00570 Ostreococcus sp RCC809 4e-14 80.9 357 23.81
HE0000G57900 Helicosporidium sp. 6e-14 78.6 204 24.51
ENSMUSG00000034145 Mus musculus 7e-14 79.3 573 21.29
CNC64A_016G01620 Chlorella sp NC64A 1e-13 79.0 238 26.89
YLL005C Saccharomyces cerevisiae strain S288C 2e-13 78.6 459 20.70
BPRRCC1105_03G05210 Bathycoccus prasinos 2e-13 78.6 428 21.03
AA0007G01680 Aureococcus anophagefferens 3e-13 78.2 382 23.82
MP13G00340 Micromonas pusilla strain CCMP1545 1e-12 76.3 133 27.07
ES0203G00360 Ectocarpus siliculosus 1e-12 75.9 246 24.39
AA0002G03270 Aureococcus anophagefferens 2e-12 71.2 220 27.73
AA0016G00470 Aureococcus anophagefferens 3e-12 74.7 351 22.51
PI00G58370 Picochlorum sp. SENEW3 (SE3) 1e-11 72.4 298 23.49
RCC4223.12g02240 Picochlorum_RCC4223 3e-11 71.2 226 23.45
CR10G09210 Chlamydomonas reinhardtii 3e-11 71.2 220 21.82
AT4G35870 Arabidopsis thaliana 5e-11 70.5 458 22.05
AC00G55200 Asterochloris sp. Cgr-DA1pho v2.0 2e-10 67.8 176 26.14
FC002G04180 Fragilariopsis cylindrus 9e-09 63.5 262 24.81
AA0021G00310 Aureococcus anophagefferens 1e-08 62.8 352 22.44
ATR_00001G00730 Amborella trichopoda 1e-07 59.7 471 19.96
phs248560 Phytophtora sojae 1e-07 59.7 288 23.96
CR12G10740 Chlamydomonas reinhardtii 3e-07 58.5 301 22.92
OS03G04450 Oryza sativa 8e-07 56.6 151 24.50
CV00G11980 Coccomyxa subellipsoidea C-169 4e-06 53.9 132 26.52

Amborella trichopoda (9 genes)
Arabidopsis thaliana (15 genes)
Asterochloris sp. Cgr-DA1pho v2.0 (4 genes)
Aureococcus anophagefferens (6 genes)
Auxenochlorella protothecoides (3 genes)
Bathycoccus prasinos (4 genes)
Caenorhabditis elegans (0 genes)
Chlamydomonas reinhardtii (11 genes)
Chlorella sp NC64A (4 genes)
Chondrus crispus (2 genes)
Coccomyxa subellipsoidea C-169 (5 genes)
Cyanidioschyzon merolae (0 genes)
Dictyostelium discoideum (3 genes)
Drosophila melanogaster (1 genes)
Ectocarpus siliculosus (5 genes)
Emiliania huxleyi (0 genes)
Fragilariopsis cylindrus (5 genes)
Galdieria sulphuraria (1 genes)
Helicosporidium sp. (3 genes)
Homo sapiens (0 genes)
Micromonas pusilla strain CCMP1545 (3 genes)
Micromonas sp RCC299 (3 genes)
Mus musculus (3 genes)
Nannochloropsis gaditana (5 genes)
Oryza sativa (11 genes)
Ostreococcus lucimarinus (3 genes)
Ostreococcus mediterraneus (3 genes)
Ostreococcus sp RCC809 (3 genes)
Ostreococcus tauri (3 genes)
Paramecium tetraurelia (0 genes)
Phaeodactylum tricornutum (6 genes)
Physcomitrella patens (17 genes)
Phytophtora sojae (4 genes)
Picochlorum sp. SENEW3 (SE3) (4 genes)
Picochlorum_RCC4223 (4 genes)
Saccharomyces cerevisiae strain S288C (4 genes)
Schizosaccharomyces pombe (3 genes)
Thalassiosira pseudonana (3 genes)
Volvox carteri (4 genes)

Program Settings