Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Interactive Phylogenetics Module

Gene Id: AT4G02300

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT4G02300	Arabidopsis thaliana	0.0	1105	533	100.00
AT4G02320	Arabidopsis thaliana	0.0	660	499	64.73
ATR_00003G00820	Amborella trichopoda	4e-165	487	488	50.41
OS07G47830	Oryza sativa	4e-150	450	455	49.01
ATR_00129G00220	Amborella trichopoda	3e-144	433	497	45.88
ATR_00129G00200	Amborella trichopoda	6e-141	426	504	46.63
OS01G21034	Oryza sativa	8e-138	413	435	49.66
ATR_00021G02540	Amborella trichopoda	1e-134	411	508	43.70
AT5G53370	Arabidopsis thaliana	5e-134	409	493	44.02
AT1G53830	Arabidopsis thaliana	3e-133	406	512	45.31
AT3G49220	Arabidopsis thaliana	2e-132	405	520	42.31
ATR_00002G02630	Amborella trichopoda	3e-132	402	445	45.62
ATR_00010G01230	Amborella trichopoda	3e-131	399	452	45.58
ATR_00038G00150	Amborella trichopoda	3e-129	395	495	45.25
ATR_00003G02370	Amborella trichopoda	3e-129	395	466	43.78
AT3G14310	Arabidopsis thaliana	5e-128	393	543	41.62
AT4G33220	Arabidopsis thaliana	3e-127	389	467	44.54
AT3G43270	Arabidopsis thaliana	3e-126	387	533	39.40
ATR_00129G00460	Amborella trichopoda	2e-125	389	334	53.29
AT2G45220	Arabidopsis thaliana	2e-123	379	446	46.41
AT3G05620	Arabidopsis thaliana	2e-123	380	459	42.92
AT1G11580	Arabidopsis thaliana	3e-123	380	447	43.40
AT2G26440	Arabidopsis thaliana	3e-123	379	534	41.39
OS01G57854	Oryza sativa	4e-123	379	448	43.30
ATR_00129G00130	Amborella trichopoda	2e-120	372	557	40.22
ATR_00129G00110	Amborella trichopoda	2e-120	373	465	44.09
AT2G43050	Arabidopsis thaliana	1e-119	369	544	39.52
ATR_00007G00590	Amborella trichopoda	1e-118	368	444	43.69
AT3G59010	Arabidopsis thaliana	1e-118	367	446	44.62
ATR_00129G00450	Amborella trichopoda	9e-117	363	436	43.81
OS01G20980	Oryza sativa	1e-116	363	467	42.18
AT2G26450	Arabidopsis thaliana	2e-116	364	493	41.78
OS01G13320	Oryza sativa	3e-115	361	516	38.95
AT3G60730	Arabidopsis thaliana	4e-114	355	534	37.45
OS05G29790	Oryza sativa	6e-114	357	572	36.89
OS08G34900	Oryza sativa	6e-114	356	469	39.45
AT5G51490	Arabidopsis thaliana	4e-113	353	455	42.86
OS04G38560	Oryza sativa	1e-112	353	454	42.29
ATR_00040G01820	Amborella trichopoda	5e-112	352	492	39.23
AT4G33230	Arabidopsis thaliana	5e-112	352	455	41.98
ATR_00129G00080	Amborella trichopoda	6e-112	352	470	40.85
ATR_00003G02420	Amborella trichopoda	7e-112	352	456	41.67
AT1G02810	Arabidopsis thaliana	9e-112	351	315	53.97
AT5G51500	Arabidopsis thaliana	2e-111	348	454	42.29
AT4G02330	Arabidopsis thaliana	2e-111	350	482	40.46
AT5G27870	Arabidopsis thaliana	3e-111	354	455	39.56
AT3G47400	Arabidopsis thaliana	4e-111	350	484	40.91
AT2G47550	Arabidopsis thaliana	4e-110	346	461	41.87
AT1G23200	Arabidopsis thaliana	2e-109	343	479	40.08
AT5G04970	Arabidopsis thaliana	3e-109	346	471	42.89
ATR_00129G00440	Amborella trichopoda	1e-108	345	477	39.41
AT5G49180	Arabidopsis thaliana	2e-108	342	459	40.31
AT3G10720	Arabidopsis thaliana	6e-108	342	475	41.47
OS02G54190	Oryza sativa	1e-107	340	457	40.48
AT3G05610	Arabidopsis thaliana	1e-107	343	488	37.30
OS02G18650	Oryza sativa	4e-107	338	342	48.83
OS04G54850	Oryza sativa	7e-107	348	335	49.55
AT3G06830	Arabidopsis thaliana	2e-106	337	497	38.83
AT5G04960	Arabidopsis thaliana	7e-105	332	486	38.48
ATR_00129G00420	Amborella trichopoda	2e-104	332	456	38.60
OS07G49100	Oryza sativa	1e-101	324	454	39.21
OS03G18860	Oryza sativa	3e-101	323	452	40.27
OS06G09340	Oryza sativa	4e-101	323	458	37.55
AT1G53840	Arabidopsis thaliana	7e-100	320	446	37.67
AT4G03930	Arabidopsis thaliana	8e-99	315	532	37.03
AT4G00190	Arabidopsis thaliana	9e-99	314	443	40.18
AT3G10710	Arabidopsis thaliana	3e-98	315	486	37.86
ATR_00105G00410	Amborella trichopoda	1e-96	304	313	47.28
AT3G14300	Arabidopsis thaliana	4e-96	319	443	39.50
AT3G27980	Arabidopsis thaliana	4e-96	308	484	38.02
AT1G11590	Arabidopsis thaliana	2e-95	306	536	36.19
OS09G26360	Oryza sativa	7e-95	308	458	36.90
OS01G15039	Oryza sativa	5e-94	305	447	38.93
PP00026G00180	Physcomitrella patens	2e-91	299	527	35.86
PP00151G00090	Physcomitrella patens	2e-89	294	336	46.43
PP00076G00500	Physcomitrella patens	2e-86	284	470	35.53
PP00382G00100	Physcomitrella patens	3e-86	284	433	38.57
OS08G34910	Oryza sativa	2e-85	284	368	40.76
AT4G15980	Arabidopsis thaliana	2e-84	283	335	43.58
PP00096G00250	Physcomitrella patens	1e-83	278	469	36.25
OS11G07090	Oryza sativa	2e-83	275	478	33.89
ATR_00129G00140	Amborella trichopoda	7e-81	259	228	54.82
PP00258G00150	Physcomitrella patens	2e-79	266	469	34.97
PP00095G00350	Physcomitrella patens	3e-79	266	355	40.85
ATR_00071G00820	Amborella trichopoda	2e-78	264	309	44.98
PP00149G01070	Physcomitrella patens	2e-78	263	489	34.36
PP00378G00080	Physcomitrella patens	4e-78	263	474	33.54
AT5G20860	Arabidopsis thaliana	2e-77	259	468	36.54
OS03G28090	Oryza sativa	2e-77	261	480	32.50
AT3G62170	Arabidopsis thaliana	3e-77	261	503	33.20
AT1G11370	Arabidopsis thaliana	5e-77	251	262	47.71
ATR_00040G02900	Amborella trichopoda	6e-76	257	452	35.40
OS08G12410	Oryza sativa	6e-75	249	353	39.38
AT5G09760	Arabidopsis thaliana	3e-74	251	310	45.81
PP00035G01530	Physcomitrella patens	1e-73	250	462	32.68
AT2G47030	Arabidopsis thaliana	9e-73	248	508	31.50
PP00032G00150	Physcomitrella patens	3e-72	246	485	34.02
AT2G47040	Arabidopsis thaliana	5e-72	247	533	32.46
PP00216G00060	Physcomitrella patens	5e-72	248	462	33.98
AT5G64640	Arabidopsis thaliana	6e-71	244	466	34.33
PP00033G00080	Physcomitrella patens	1e-70	244	460	34.57
OS01G65790	Oryza sativa	1e-70	241	367	36.78
OS04G35770	Oryza sativa	2e-68	234	305	40.98
OS11G36240	Oryza sativa	9e-68	229	343	36.15
OS11G08750	Oryza sativa	3e-66	225	309	43.04
AT1G05310	Arabidopsis thaliana	2e-55	197	315	38.41
PP00227G00060	Physcomitrella patens	6e-55	195	313	36.74
PP00175G00080	Physcomitrella patens	1e-53	191	357	33.61
PP00023G00650	Physcomitrella patens	1e-51	187	313	37.06
PP00129G00450	Physcomitrella patens	7e-51	182	315	34.92
ATR_00056G01410	Amborella trichopoda	6e-49	179	334	33.53
OS01G53990	Oryza sativa	7e-49	179	306	34.97
PP00461G00040	Physcomitrella patens	1e-48	177	310	33.87
OS05G44600	Oryza sativa	2e-48	178	303	35.97
PP00045G01090	Physcomitrella patens	5e-48	176	299	37.12
AT2G36710	Arabidopsis thaliana	8e-47	174	317	33.12
AT3G29090	Arabidopsis thaliana	1e-46	171	310	33.87
PP00112G00630	Physcomitrella patens	2e-46	172	314	33.44
PP00067G00390	Physcomitrella patens	3e-46	173	315	34.29
AT2G36700	Arabidopsis thaliana	4e-46	170	320	32.81
PP00081G01220	Physcomitrella patens	6e-46	170	299	34.11
PP00112G00650	Physcomitrella patens	6e-46	170	298	34.23
PP00055G00770	Physcomitrella patens	7e-46	172	315	35.56
AT5G19730	Arabidopsis thaliana	7e-46	171	303	33.66
OS08G10604	Oryza sativa	2e-45	170	322	34.16
PP00035G00530	Physcomitrella patens	2e-45	170	353	33.71
OS01G44340	Oryza sativa	2e-45	167	303	34.65
ATR_00007G03430	Amborella trichopoda	5e-45	167	353	32.01
PP00003G01970	Physcomitrella patens	9e-45	167	309	34.95
OS09G37360	Oryza sativa	4e-44	163	313	35.78
PP00215G00220	Physcomitrella patens	4e-44	165	316	32.59
PP00118G00140	Physcomitrella patens	2e-43	164	306	32.68
OS10G26680	Oryza sativa	2e-43	162	275	34.55
OS07G41650	Oryza sativa	2e-43	163	317	34.70
ATR_00147G00580	Amborella trichopoda	3e-43	157	220	40.45
AT3G17060	Arabidopsis thaliana	8e-43	161	312	31.41
PP00067G00680	Physcomitrella patens	2e-42	160	296	35.47
PP00236G00310	Physcomitrella patens	4e-42	159	305	33.11
AT2G21610	Arabidopsis thaliana	9e-42	158	302	31.46
PP00112G00540	Physcomitrella patens	9e-42	159	298	33.56
PP00059G01430	Physcomitrella patens	2e-41	159	304	34.87
PP00236G00340	Physcomitrella patens	2e-41	158	297	33.00
PP00236G00370	Physcomitrella patens	2e-41	158	297	33.00
PP00198G00170	Physcomitrella patens	1e-40	160	346	33.24
PP00014G01990	Physcomitrella patens	2e-40	157	329	32.22
PP00067G00020	Physcomitrella patens	3e-40	154	366	30.60
ATR_00123G00030	Amborella trichopoda	6e-40	154	336	31.55
ATR_00028G00190	Amborella trichopoda	1e-39	152	309	33.01
PP00035G00160	Physcomitrella patens	2e-39	152	317	32.81
PP00318G00210	Physcomitrella patens	3e-39	152	336	32.74
ATR_00041G00140	Amborella trichopoda	1e-38	144	160	46.25
OS04G46740	Oryza sativa	4e-38	148	314	33.44
AT5G07430	Arabidopsis thaliana	1e-37	147	342	29.82
PP00446G00020	Physcomitrella patens	3e-37	146	334	31.14
AT5G07420	Arabidopsis thaliana	4e-37	145	299	30.77
PP00035G00330	Physcomitrella patens	7e-37	147	319	31.03
AT5G18990	Arabidopsis thaliana	1e-36	143	291	31.27
AT3G24130	Arabidopsis thaliana	2e-36	142	288	32.29
AT5G55590	Arabidopsis thaliana	3e-36	143	307	34.53
ATR_00027G01600	Amborella trichopoda	4e-36	140	247	34.82
AT1G44980	Arabidopsis thaliana	2e-35	137	184	41.30
ATR_00007G03440	Amborella trichopoda	2e-35	136	202	35.64
AT5G47500	Arabidopsis thaliana	2e-35	140	315	30.79
OS09G39760	Oryza sativa	1e-34	139	330	30.00
ATR_00106G00610	Amborella trichopoda	1e-33	135	313	30.03
AT1G69940	Arabidopsis thaliana	2e-33	134	299	29.43
PP00118G00270	Physcomitrella patens	3e-33	135	311	31.83
AT5G07410	Arabidopsis thaliana	3e-33	134	299	29.43
OS12G37660	Oryza sativa	5e-33	134	340	30.59
OS01G19440	Oryza sativa	1e-31	129	277	33.57
AT5G61680	Arabidopsis thaliana	3e-31	127	324	29.01
AT2G19150	Arabidopsis thaliana	2e-30	125	303	31.35
ATR_00120G00370	Amborella trichopoda	2e-30	120	149	44.30
ATR_00010G05400	Amborella trichopoda	4e-30	123	204	33.33
ATR_00036G00670	Amborella trichopoda	9e-29	117	121	47.11
PP00325G00260	Physcomitrella patens	2e-28	120	325	28.92
OS03G19610	Oryza sativa	3e-28	119	297	29.29
PP00341G00330	Physcomitrella patens	4e-28	119	314	29.62
ATR_00033G02140	Amborella trichopoda	1e-26	110	162	35.19
OS11G45730	Oryza sativa	4e-26	115	312	31.73
OS07G46190	Oryza sativa	3e-25	110	271	28.78
phs43770	Phytophtora sojae	7e-25	109	294	28.57
ATR_00129G00160	Amborella trichopoda	2e-24	108	336	28.57
AT5G26810	Arabidopsis thaliana	2e-24	107	199	29.65
PP00029G01430	Physcomitrella patens	3e-24	108	401	24.19
ATR_00052G01010	Amborella trichopoda	3e-24	104	120	44.17
ATR_00042G00380	Amborella trichopoda	5e-24	107	167	36.53
AT2G47280	Arabidopsis thaliana	8e-24	106	324	28.40
phs244740	Phytophtora sojae	9e-24	106	195	32.82
phs233890	Phytophtora sojae	4e-23	104	281	29.18
phs377630	Phytophtora sojae	1e-22	103	292	27.74
OS11G45720	Oryza sativa	3e-22	103	285	31.93
phs377550	Phytophtora sojae	6e-22	101	185	32.43
phs377650	Phytophtora sojae	4e-21	97.1	185	31.89
phs30840	Phytophtora sojae	2e-19	93.6	287	28.57
phs196830	Phytophtora sojae	8e-19	89.7	183	34.97
OS02G46310	Oryza sativa	6e-18	88.2	291	27.15
ATR_00003G00500	Amborella trichopoda	3e-16	80.5	138	32.61
ATR_01006G00020	Amborella trichopoda	8e-16	78.2	81	43.21
phs377530	Phytophtora sojae	1e-15	82.0	185	29.19
ATR_00116G00020	Amborella trichopoda	4e-15	78.6	125	33.60
ATR_00102G00520	Amborella trichopoda	9e-15	77.4	122	33.61
phs351340	Phytophtora sojae	2e-14	78.6	199	27.14
phs233870	Phytophtora sojae	5e-14	76.6	269	26.39
phs350300	Phytophtora sojae	7e-14	77.0	295	23.39
PP04103G00010	Physcomitrella patens	7e-14	75.5	223	30.04
OS04G43370	Oryza sativa	1e-13	73.6	149	28.86
phs30940	Phytophtora sojae	1e-12	70.9	152	31.58
PP00261G00180	Physcomitrella patens	4e-12	69.7	125	36.00
ATR_00140G00090	Amborella trichopoda	2e-10	63.9	125	31.20
phs43750	Phytophtora sojae	2e-10	66.2	184	26.09
OS11G43830	Oryza sativa	5e-10	64.7	157	28.66
phs292960	Phytophtora sojae	6e-09	61.6	138	30.43
phs30800	Phytophtora sojae	7e-09	61.6	138	30.43
ATR_00033G02150	Amborella trichopoda	3e-08	59.7	85	38.82
phs30880	Phytophtora sojae	4e-08	58.9	299	23.08
ATR_00007G03450	Amborella trichopoda	2e-06	51.6	161	27.33
phs292480	Phytophtora sojae	5e-06	52.0	89	33.71

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment