Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Interactive Phylogenetics Module

Gene Id: AT4G00190

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT4G00190	Arabidopsis thaliana	0.0	989	475	100.00
AT2G45220	Arabidopsis thaliana	1e-166	487	487	52.77
ATR_00002G02630	Amborella trichopoda	4e-147	438	494	45.55
AT5G51490	Arabidopsis thaliana	5e-138	415	503	46.12
AT5G51500	Arabidopsis thaliana	8e-135	407	500	45.40
ATR_00010G01230	Amborella trichopoda	7e-133	401	497	44.87
AT3G47400	Arabidopsis thaliana	3e-123	379	509	43.61
ATR_00003G02370	Amborella trichopoda	2e-120	371	522	41.19
AT1G23200	Arabidopsis thaliana	3e-120	370	520	40.77
AT3G49220	Arabidopsis thaliana	8e-120	370	512	41.99
ATR_00021G02540	Amborella trichopoda	8e-120	370	533	41.65
AT3G05620	Arabidopsis thaliana	8e-117	360	404	48.02
AT3G59010	Arabidopsis thaliana	2e-116	359	486	42.59
OS08G34900	Oryza sativa	4e-115	357	421	43.47
ATR_00129G00130	Amborella trichopoda	3e-114	354	518	41.12
ATR_00129G00200	Amborella trichopoda	5e-114	354	521	42.42
AT5G53370	Arabidopsis thaliana	4e-113	352	506	41.11
ATR_00038G00150	Amborella trichopoda	5e-113	350	521	39.54
ATR_00129G00220	Amborella trichopoda	7e-113	350	462	41.77
ATR_00003G00820	Amborella trichopoda	1e-112	350	414	44.44
AT1G11580	Arabidopsis thaliana	4e-112	349	465	42.80
AT3G60730	Arabidopsis thaliana	2e-110	343	457	41.79
OS01G21034	Oryza sativa	6e-110	339	316	54.75
OS01G57854	Oryza sativa	8e-110	343	499	38.08
AT3G43270	Arabidopsis thaliana	5e-109	340	508	39.17
OS02G54190	Oryza sativa	2e-108	340	514	39.69
AT4G02320	Arabidopsis thaliana	2e-108	338	445	41.57
ATR_00129G00110	Amborella trichopoda	4e-108	339	330	49.70
AT1G02810	Arabidopsis thaliana	5e-108	339	553	36.17
ATR_00129G00450	Amborella trichopoda	3e-107	336	500	38.20
OS02G18650	Oryza sativa	2e-106	334	322	51.55
AT2G43050	Arabidopsis thaliana	2e-106	333	474	40.51
ATR_00007G00590	Amborella trichopoda	3e-106	333	464	42.24
OS07G47830	Oryza sativa	4e-106	334	513	38.60
AT3G10710	Arabidopsis thaliana	4e-106	333	435	42.30
AT2G47550	Arabidopsis thaliana	3e-105	331	531	39.36
AT4G02330	Arabidopsis thaliana	5e-105	331	310	51.61
OS11G07090	Oryza sativa	7e-105	329	466	40.34
AT1G53830	Arabidopsis thaliana	8e-105	331	528	39.77
AT3G10720	Arabidopsis thaliana	4e-104	330	534	37.27
OS01G15039	Oryza sativa	5e-104	330	316	51.58
AT3G14310	Arabidopsis thaliana	1e-103	328	537	38.55
OS01G20980	Oryza sativa	2e-103	327	531	36.91
AT2G26440	Arabidopsis thaliana	9e-103	324	510	39.80
ATR_00105G00410	Amborella trichopoda	1e-102	317	322	48.76
AT4G33220	Arabidopsis thaliana	1e-102	323	460	40.22
AT5G04960	Arabidopsis thaliana	3e-102	323	502	38.45
AT5G04970	Arabidopsis thaliana	8e-102	324	317	50.79
ATR_00129G00460	Amborella trichopoda	8e-102	325	312	51.28
ATR_00129G00080	Amborella trichopoda	1e-99	318	445	40.67
OS05G29790	Oryza sativa	4e-99	316	534	37.64
AT4G02300	Arabidopsis thaliana	8e-99	314	443	40.18
OS01G13320	Oryza sativa	1e-98	316	435	40.23
OS07G49100	Oryza sativa	1e-97	312	511	38.16
AT2G26450	Arabidopsis thaliana	3e-97	312	448	39.96
OS04G38560	Oryza sativa	1e-96	309	453	40.40
AT3G27980	Arabidopsis thaliana	1e-96	307	395	42.28
AT4G03930	Arabidopsis thaliana	5e-96	306	509	35.56
AT1G11590	Arabidopsis thaliana	9e-96	305	435	40.00
OS06G09340	Oryza sativa	1e-95	307	446	39.24
AT1G53840	Arabidopsis thaliana	4e-95	306	451	39.25
ATR_00129G00420	Amborella trichopoda	2e-94	304	514	37.94
AT5G49180	Arabidopsis thaliana	3e-94	303	417	41.73
ATR_00040G01820	Amborella trichopoda	4e-94	303	445	39.78
AT3G05610	Arabidopsis thaliana	5e-94	305	519	34.10
PP00076G00500	Physcomitrella patens	9e-94	301	459	38.78
OS04G54850	Oryza sativa	6e-93	308	356	47.19
AT3G06830	Arabidopsis thaliana	6e-92	297	496	36.90
AT4G33230	Arabidopsis thaliana	2e-90	294	417	40.05
ATR_00003G02420	Amborella trichopoda	4e-90	293	516	34.69
AT5G27870	Arabidopsis thaliana	4e-90	296	316	45.25
OS03G18860	Oryza sativa	2e-88	287	408	40.20
PP00026G00180	Physcomitrella patens	3e-87	286	538	35.13
ATR_00071G00820	Amborella trichopoda	4e-87	285	317	47.63
AT3G14300	Arabidopsis thaliana	6e-87	292	510	36.67
PP00151G00090	Physcomitrella patens	6e-87	285	315	47.62
ATR_00129G00140	Amborella trichopoda	7e-87	273	223	58.30
OS09G26360	Oryza sativa	3e-86	283	516	34.11
AT5G09760	Arabidopsis thaliana	4e-86	281	511	37.38
OS08G34910	Oryza sativa	2e-85	282	314	46.18
PP00032G00150	Physcomitrella patens	6e-85	278	537	34.45
PP00095G00350	Physcomitrella patens	8e-85	278	542	33.95
OS08G12410	Oryza sativa	4e-84	271	327	45.57
PP00258G00150	Physcomitrella patens	4e-84	277	336	43.75
ATR_00129G00440	Amborella trichopoda	7e-84	278	535	32.90
AT4G15980	Arabidopsis thaliana	2e-82	275	318	46.23
PP00149G01070	Physcomitrella patens	3e-82	271	461	36.44
PP00378G00080	Physcomitrella patens	2e-81	270	535	33.64
AT5G64640	Arabidopsis thaliana	4e-81	270	515	34.95
OS11G36240	Oryza sativa	1e-79	259	308	42.53
OS03G28090	Oryza sativa	1e-79	265	353	40.51
OS11G08750	Oryza sativa	2e-78	256	312	43.27
PP00382G00100	Physcomitrella patens	3e-78	261	307	44.63
AT5G20860	Arabidopsis thaliana	2e-77	257	422	38.15
PP00096G00250	Physcomitrella patens	1e-76	258	350	40.00
ATR_00040G02900	Amborella trichopoda	2e-76	257	501	31.74
PP00216G00060	Physcomitrella patens	3e-76	258	531	33.52
AT1G11370	Arabidopsis thaliana	3e-73	239	258	45.35
OS01G65790	Oryza sativa	3e-72	244	308	42.86
AT3G62170	Arabidopsis thaliana	5e-70	239	318	42.45
AT2G47030	Arabidopsis thaliana	1e-69	239	322	41.61
PP00035G01530	Physcomitrella patens	3e-68	234	319	40.44
AT2G47040	Arabidopsis thaliana	1e-67	233	318	41.19
OS04G35770	Oryza sativa	1e-65	225	276	43.48
PP00033G00080	Physcomitrella patens	3e-63	222	535	31.59
OS09G37360	Oryza sativa	4e-59	202	307	40.39
PP00129G00450	Physcomitrella patens	8e-55	192	319	37.62
PP00227G00060	Physcomitrella patens	8e-54	191	310	39.03
PP00175G00080	Physcomitrella patens	2e-53	189	309	36.57
PP00198G00170	Physcomitrella patens	3e-53	196	310	36.77
PP00112G00650	Physcomitrella patens	1e-52	187	309	36.89
PP00023G00650	Physcomitrella patens	5e-52	187	316	36.39
PP00045G01090	Physcomitrella patens	1e-51	184	302	37.75
OS01G53990	Oryza sativa	1e-51	185	303	37.62
OS05G44600	Oryza sativa	2e-51	185	312	37.50
AT3G29090	Arabidopsis thaliana	5e-51	182	304	35.86
PP00055G00770	Physcomitrella patens	3e-49	180	326	34.05
PP00461G00040	Physcomitrella patens	4e-49	178	308	36.04
PP00003G01970	Physcomitrella patens	4e-49	178	305	36.07
PP00118G00140	Physcomitrella patens	6e-49	178	308	35.71
PP00112G00630	Physcomitrella patens	6e-49	178	314	35.99
AT5G19730	Arabidopsis thaliana	6e-49	178	309	36.89
AT3G17060	Arabidopsis thaliana	1e-48	176	322	34.16
PP00067G00390	Physcomitrella patens	5e-48	177	317	32.81
AT2G21610	Arabidopsis thaliana	8e-48	174	306	34.64
PP00035G00530	Physcomitrella patens	2e-47	174	312	34.94
ATR_00056G01410	Amborella trichopoda	4e-47	172	302	34.77
OS10G26680	Oryza sativa	4e-47	171	314	34.71
PP00236G00340	Physcomitrella patens	5e-47	172	298	35.57
PP00236G00370	Physcomitrella patens	5e-47	172	298	35.57
PP00318G00210	Physcomitrella patens	2e-46	171	334	33.83
OS07G41650	Oryza sativa	4e-46	170	318	35.22
OS01G44340	Oryza sativa	4e-46	169	301	34.22
AT2G36700	Arabidopsis thaliana	1e-45	167	334	31.14
PP00067G00020	Physcomitrella patens	7e-45	166	298	34.90
PP00081G01220	Physcomitrella patens	1e-44	166	378	30.42
ATR_00007G03430	Amborella trichopoda	2e-44	165	317	35.02
PP00215G00220	Physcomitrella patens	3e-44	165	304	33.88
PP00236G00310	Physcomitrella patens	4e-43	162	305	33.11
PP00067G00680	Physcomitrella patens	4e-43	161	299	36.12
ATR_00028G00190	Amborella trichopoda	6e-43	160	319	34.48
PP00014G01990	Physcomitrella patens	1e-42	162	331	32.63
OS04G46740	Oryza sativa	1e-42	160	313	33.23
ATR_00123G00030	Amborella trichopoda	1e-41	158	312	35.58
AT2G36710	Arabidopsis thaliana	1e-41	158	317	33.44
PP00059G01430	Physcomitrella patens	6e-41	156	303	33.99
ATR_00027G01600	Amborella trichopoda	7e-41	153	251	36.65
ATR_00147G00580	Amborella trichopoda	1e-40	149	134	53.73
PP00112G00540	Physcomitrella patens	3e-40	154	295	34.24
OS08G10604	Oryza sativa	3e-40	154	327	32.72
AT5G07430	Arabidopsis thaliana	3e-40	153	308	33.44
AT1G05310	Arabidopsis thaliana	1e-39	152	312	32.37
OS12G37660	Oryza sativa	1e-37	147	316	34.49
AT1G44980	Arabidopsis thaliana	1e-37	143	188	39.89
PP00118G00270	Physcomitrella patens	1e-37	147	308	33.77
PP00446G00020	Physcomitrella patens	4e-37	145	332	31.02
ATR_00007G03440	Amborella trichopoda	7e-37	140	204	38.73
AT5G18990	Arabidopsis thaliana	2e-36	142	315	31.75
OS09G39760	Oryza sativa	2e-36	143	314	33.76
PP00341G00330	Physcomitrella patens	3e-36	142	364	29.12
AT5G61680	Arabidopsis thaliana	3e-36	141	304	31.58
ATR_00106G00610	Amborella trichopoda	3e-36	142	317	30.28
AT5G07420	Arabidopsis thaliana	1e-35	140	306	31.37
ATR_00010G05400	Amborella trichopoda	1e-35	138	202	38.61
AT5G47500	Arabidopsis thaliana	3e-35	139	318	30.50
OS01G19440	Oryza sativa	4e-35	138	278	34.89
AT5G55590	Arabidopsis thaliana	5e-35	139	311	34.41
AT3G24130	Arabidopsis thaliana	6e-35	138	317	30.91
ATR_00041G00140	Amborella trichopoda	6e-35	133	160	43.75
PP00035G00330	Physcomitrella patens	5e-34	138	318	32.08
ATR_00120G00370	Amborella trichopoda	5e-33	127	160	41.88
PP00035G00160	Physcomitrella patens	6e-33	132	314	32.17
AT1G69940	Arabidopsis thaliana	1e-31	129	298	28.52
AT5G07410	Arabidopsis thaliana	2e-31	128	298	28.52
ATR_00036G00670	Amborella trichopoda	4e-31	124	121	52.07
AT2G19150	Arabidopsis thaliana	8e-31	125	316	30.38
OS07G46190	Oryza sativa	1e-29	122	268	32.84
AT2G47280	Arabidopsis thaliana	4e-29	120	311	31.19
OS11G45730	Oryza sativa	1e-28	122	290	31.72
phs43770	Phytophtora sojae	1e-28	119	292	31.16
PP00029G01430	Physcomitrella patens	1e-27	118	362	28.45
phs244740	Phytophtora sojae	1e-27	116	183	37.16
OS03G19610	Oryza sativa	2e-27	116	320	27.50
OS11G45720	Oryza sativa	2e-27	117	332	30.42
phs350300	Phytophtora sojae	7e-27	114	294	31.29
phs377550	Phytophtora sojae	3e-25	110	296	30.41
ATR_00052G01010	Amborella trichopoda	4e-25	105	111	45.95
phs351340	Phytophtora sojae	6e-25	108	289	30.10
phs233890	Phytophtora sojae	1e-24	108	286	29.72
ATR_00033G02140	Amborella trichopoda	2e-24	104	161	36.02
phs377650	Phytophtora sojae	2e-24	105	183	34.97
PP00325G00260	Physcomitrella patens	3e-24	107	320	29.38
OS04G43370	Oryza sativa	5e-24	102	148	38.51
AT5G26810	Arabidopsis thaliana	6e-24	105	236	29.66
phs377630	Phytophtora sojae	1e-23	105	293	30.38
ATR_00042G00380	Amborella trichopoda	5e-23	103	159	33.33
phs30840	Phytophtora sojae	2e-21	99.0	293	27.99
phs196830	Phytophtora sojae	2e-20	94.0	180	37.22
ATR_00129G00160	Amborella trichopoda	6e-20	94.7	294	29.93
phs377530	Phytophtora sojae	2e-19	92.8	281	28.11
phs43750	Phytophtora sojae	2e-17	86.7	287	26.48
ATR_01006G00020	Amborella trichopoda	4e-17	81.6	77	45.45
ATR_00116G00020	Amborella trichopoda	8e-17	83.2	146	34.25
ATR_00102G00520	Amborella trichopoda	9e-17	82.8	123	37.40
ATR_00003G00500	Amborella trichopoda	1e-16	81.3	141	33.33
phs233870	Phytophtora sojae	2e-16	83.6	268	28.36
phs30940	Phytophtora sojae	4e-16	80.5	151	33.11
PP04103G00010	Physcomitrella patens	2e-14	76.6	187	32.62
phs30880	Phytophtora sojae	3e-14	77.4	209	27.27
OS02G46310	Oryza sativa	6e-14	75.5	294	26.19
ATR_00033G02150	Amborella trichopoda	8e-13	73.9	84	46.43
OS11G43830	Oryza sativa	1e-12	72.4	169	30.18
phs292960	Phytophtora sojae	3e-12	71.6	169	31.36
phs30800	Phytophtora sojae	3e-12	71.2	169	31.36
PP00261G00180	Physcomitrella patens	2e-11	66.6	115	35.65
ATR_00140G00090	Amborella trichopoda	1e-10	64.3	127	31.50
phs233910	Phytophtora sojae	4e-08	58.2	93	34.41
ATR_00038G01560	Amborella trichopoda	4e-07	53.1	84	36.90
ATR_00076G00690	Amborella trichopoda	1e-06	51.6	61	49.18
ATR_00007G03450	Amborella trichopoda	7e-06	50.1	96	33.33

External Sequences (optional)

External Sequences Type

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